EWM22334.1, cds8334 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|585102832|gb|EWM22334.1| (hypothetical protein Naga_100277g2 [Nannochloropsis gaditana]) HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
Query: 1 MHPEARTPPSPTPPRSISLASLSFLTVLSLKLLSMLLYHALGPVFNRSLPSHLAAEGPSLLGVDHVLRVPVPPPGKGGRNRGGDRDELGDDSLFMTLLVKKALPPAGEGGEWQGEGGGGSKGGVVREEKGKGNLPPLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIVSGPKEGGMEYRAGGGGCTRCCFFSGAGRRKRPRFAGTFGG 346
MHPEARTPPSPTPPRSISLASLSFLTVLSLKLLSMLLYHALGPVFNRSLPSHLAAEGPSLLGVDHVLRVPVPPPGKGGRNRGGDRDELGDDSLFMTLLVKKALPPAGEGGEWQGEGGGGSKGGVVREEKGKGNLPPLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIVSGPKEGGMEYRAGGGGCTRCCFFSGAGRRKRPRFAGTFGG
Sbjct: 1 MHPEARTPPSPTPPRSISLASLSFLTVLSLKLLSMLLYHALGPVFNRSLPSHLAAEGPSLLGVDHVLRVPVPPPGKGGRNRGGDRDELGDDSLFMTLLVKKALPPAGEGGEWQGEGGGGSKGGVVREEKGKGNLPPLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIVSGPKEGGMEYRAGGGGCTRCCFFSGAGRRKRPRFAGTFGG 346
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|553189562|ref|XP_005855027.1| (alpha beta hydrolase fold protein [Nannochloropsis gaditana CCMP526] >gi|422294039|gb|EKU21339.1| alpha beta hydrolase fold protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 138.658 bits (348), Expect = 1.357e-35 Identity = 70/80 (87.50%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 241 NPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIVSGPKEGGMEYRAGG 320
NPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFI P +RAGG
Sbjct: 4 NPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFI-QLPFLPEFWFRAGG 82
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|1088944276|emb|SDX15171.1| (Pimeloyl-ACP methyl ester carboxylesterase [Marinobacter mobilis]) HSP 1 Score: 94.3597 bits (233), Expect = 1.723e-18 Identity = 65/172 (37.79%), Postives = 84/172 (48.84%), Query Frame = 0
Query: 136 PLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHE---AARGFLTHPRQFLNSWYMLF 304
P++ LHGFPD+A +F QV F AG+ VL P M GYEPS+ + + Y+L S+A +DV AW +E + P VHL GHDWGAV+AY++A + R+ SV T+AVPH RG P Q L SWYMLF
Sbjct: 29 PMVVCLHGFPDNADSFRYQVQDFVDAGYQVLTPTMRGYEPSS-ITQNEDYTLRSMA---QDVNAWL-----------------------------------DELKQP---QVHLVGHDWGAVVAYMVA---ALIPDRLLSVTTIAVPHPRRFLERGVARVPVQALKSWYMLF 155
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|1194672775|ref|WP_086001454.1| (epoxide hydrolase [Plesiocystis pacifica]) HSP 1 Score: 85.1149 bits (209), Expect = 4.347e-15 Identity = 66/183 (36.07%), Postives = 81/183 (44.26%), Query Frame = 0
Query: 138 LFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEA--ARGFLTHPRQFLNSWYMLFI-VSGPKEGGMEYR 317
+ LHGFPD+A +F Q+ A AG+ V P + GYEPS+ YSL +LA DV+AW L RA HL GHDWGA + Y + G+ R S+ T+AVPH A RG PRQ LNSWYMLF V G E + R
Sbjct: 40 VLCLHGFPDNARSFRHQLPALAAAGYRVYAPTLRGYEPSSQP-EDGDYSLAALAG---DVLAWLDELGLERA--------------------------------------HLIGHDWGAAVTYTV---GALAPERFWSLTTLAVPHPAQFVRGVARLPRQVLNSWYMLFFQVPGAPELALRRR 177
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|149818805|gb|EDM78247.1| (hypothetical protein PPSIR1_08681 [Plesiocystis pacifica SIR-1]) HSP 1 Score: 85.8853 bits (211), Expect = 1.062e-14 Identity = 67/184 (36.41%), Postives = 82/184 (44.57%), Query Frame = 0
Query: 138 LFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSS-SYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEA--ARGFLTHPRQFLNSWYMLFI-VSGPKEGGMEYR 317
+ LHGFPD+A +F Q+ A AG+ V P + GYEPS+ P YSL +LA DV+AW L RA HL GHDWGA + Y + G+ R S+ T+AVPH A RG PRQ LNSWYMLF V G E + R
Sbjct: 498 VLCLHGFPDNARSFRHQLPALAAAGYRVYAPTLRGYEPSSQ--PEDGDYSLAALAG---DVLAWLDELGLERA--------------------------------------HLIGHDWGAAVTYTV---GALAPERFWSLTTLAVPHPAQFVRGVARLPRQVLNSWYMLFFQVPGAPELALRRR 635
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|1094769334|emb|SEN00265.1| (Pimeloyl-ACP methyl ester carboxylesterase [Halorientalis persicus]) HSP 1 Score: 76.6406 bits (187), Expect = 2.629e-12 Identity = 63/178 (35.39%), Postives = 76/178 (42.70%), Query Frame = 0
Query: 128 EKGKGNLPPLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFI 305
E+G G+ L LHGFPDDA + A AGF + P M GY P T P S YS +L A + ALA L +E+GG D L GHDWGAV Y AR + R + +VT+AVP HPRQFL SWY+ F
Sbjct: 19 ERGDGDR--LALCLHGFPDDAGSMDPLAERLADAGFTAVAPYMRGYGP-TGEAPDSDYSARALG---------ADAVALADRL------------------VEDGGYD----------DAVLVGHDWGAVAGYSAARI---DPDRFSKLVTMAVPPRFGAAIWDHPRQFLRSWYVWFF 153
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|916910510|ref|WP_051517223.1| (epoxide hydrolase [Deinococcus phoenicis] >gi|597708193|gb|EYB68425.1| Alpha/beta hydrolase fold protein [Deinococcus phoenicis]) HSP 1 Score: 68.9366 bits (167), Expect = 1.519e-9 Identity = 57/171 (33.33%), Postives = 78/171 (45.61%), Query Frame = 0
Query: 136 PLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPH-EAARGFLTHPRQFLNSWYMLFI 305
PL+ LLHGFP+ + Q+ P ARAGF V++P + GY S ++Y L +L + DV A L RAL G E +G E H+ GHDWG ++A+ LA R+ V +V + PH AAR P Q+ SWY+ F
Sbjct: 30 PLVVLLHGFPEFWRAWERQIGPLARAGFRVVVPDLRGYNLSEKPPGVAAYRLHTLQS---DVAA------LIRAL---------GHER----------VGHERA--------HVVGHDWGGIIAWALA---IRQPEVVERLVILNAPHPAAARRVFRKPAQWRRSWYIFFF 161 The following BLAST results are available for this feature:
BLAST of EWM22334.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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