EWM22334.1, cds8334 (CDS) Nannochloropsis gaditana

Overview
NameEWM22334.1
Unique Namecds8334
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:484487..485527 -

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Properties
Property NameValue
Protein idEWM22334.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100277g2.2158.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:484487..485527 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase
Homology
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|585102832|gb|EWM22334.1| (hypothetical protein Naga_100277g2 [Nannochloropsis gaditana])

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
Query:    1 MHPEARTPPSPTPPRSISLASLSFLTVLSLKLLSMLLYHALGPVFNRSLPSHLAAEGPSLLGVDHVLRVPVPPPGKGGRNRGGDRDELGDDSLFMTLLVKKALPPAGEGGEWQGEGGGGSKGGVVREEKGKGNLPPLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIVSGPKEGGMEYRAGGGGCTRCCFFSGAGRRKRPRFAGTFGG 346
            MHPEARTPPSPTPPRSISLASLSFLTVLSLKLLSMLLYHALGPVFNRSLPSHLAAEGPSLLGVDHVLRVPVPPPGKGGRNRGGDRDELGDDSLFMTLLVKKALPPAGEGGEWQGEGGGGSKGGVVREEKGKGNLPPLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIVSGPKEGGMEYRAGGGGCTRCCFFSGAGRRKRPRFAGTFGG
Sbjct:    1 MHPEARTPPSPTPPRSISLASLSFLTVLSLKLLSMLLYHALGPVFNRSLPSHLAAEGPSLLGVDHVLRVPVPPPGKGGRNRGGDRDELGDDSLFMTLLVKKALPPAGEGGEWQGEGGGGSKGGVVREEKGKGNLPPLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIVSGPKEGGMEYRAGGGGCTRCCFFSGAGRRKRPRFAGTFGG 346          
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|553189562|ref|XP_005855027.1| (alpha beta hydrolase fold protein [Nannochloropsis gaditana CCMP526] >gi|422294039|gb|EKU21339.1| alpha beta hydrolase fold protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 138.658 bits (348), Expect = 1.357e-35
Identity = 70/80 (87.50%), Postives = 71/80 (88.75%), Query Frame = 0
Query:  241 NPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFIVSGPKEGGMEYRAGG 320
            NPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFI   P      +RAGG
Sbjct:    4 NPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFI-QLPFLPEFWFRAGG 82          
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|1088944276|emb|SDX15171.1| (Pimeloyl-ACP methyl ester carboxylesterase [Marinobacter mobilis])

HSP 1 Score: 94.3597 bits (233), Expect = 1.723e-18
Identity = 65/172 (37.79%), Postives = 84/172 (48.84%), Query Frame = 0
Query:  136 PLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHE---AARGFLTHPRQFLNSWYMLF 304
            P++  LHGFPD+A +F  QV  F  AG+ VL P M GYEPS+ +  +  Y+L S+A   +DV AW                                    +E + P    VHL GHDWGAV+AY++A   +    R+ SV T+AVPH      RG    P Q L SWYMLF
Sbjct:   29 PMVVCLHGFPDNADSFRYQVQDFVDAGYQVLTPTMRGYEPSS-ITQNEDYTLRSMA---QDVNAWL-----------------------------------DELKQP---QVHLVGHDWGAVVAYMVA---ALIPDRLLSVTTIAVPHPRRFLERGVARVPVQALKSWYMLF 155          
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|1194672775|ref|WP_086001454.1| (epoxide hydrolase [Plesiocystis pacifica])

HSP 1 Score: 85.1149 bits (209), Expect = 4.347e-15
Identity = 66/183 (36.07%), Postives = 81/183 (44.26%), Query Frame = 0
Query:  138 LFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEA--ARGFLTHPRQFLNSWYMLFI-VSGPKEGGMEYR 317
            +  LHGFPD+A +F  Q+   A AG+ V  P + GYEPS+       YSL +LA    DV+AW     L RA                                      HL GHDWGA + Y +   G+    R  S+ T+AVPH A   RG    PRQ LNSWYMLF  V G  E  +  R
Sbjct:   40 VLCLHGFPDNARSFRHQLPALAAAGYRVYAPTLRGYEPSSQP-EDGDYSLAALAG---DVLAWLDELGLERA--------------------------------------HLIGHDWGAAVTYTV---GALAPERFWSLTTLAVPHPAQFVRGVARLPRQVLNSWYMLFFQVPGAPELALRRR 177          
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|149818805|gb|EDM78247.1| (hypothetical protein PPSIR1_08681 [Plesiocystis pacifica SIR-1])

HSP 1 Score: 85.8853 bits (211), Expect = 1.062e-14
Identity = 67/184 (36.41%), Postives = 82/184 (44.57%), Query Frame = 0
Query:  138 LFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSS-SYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEA--ARGFLTHPRQFLNSWYMLFI-VSGPKEGGMEYR 317
            +  LHGFPD+A +F  Q+   A AG+ V  P + GYEPS+   P    YSL +LA    DV+AW     L RA                                      HL GHDWGA + Y +   G+    R  S+ T+AVPH A   RG    PRQ LNSWYMLF  V G  E  +  R
Sbjct:  498 VLCLHGFPDNARSFRHQLPALAAAGYRVYAPTLRGYEPSSQ--PEDGDYSLAALAG---DVLAWLDELGLERA--------------------------------------HLIGHDWGAAVTYTV---GALAPERFWSLTTLAVPHPAQFVRGVARLPRQVLNSWYMLFFQVPGAPELALRRR 635          
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|1094769334|emb|SEN00265.1| (Pimeloyl-ACP methyl ester carboxylesterase [Halorientalis persicus])

HSP 1 Score: 76.6406 bits (187), Expect = 2.629e-12
Identity = 63/178 (35.39%), Postives = 76/178 (42.70%), Query Frame = 0
Query:  128 EKGKGNLPPLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPHEAARGFLTHPRQFLNSWYMLFI 305
            E+G G+   L   LHGFPDDA +        A AGF  + P M GY P T   P S YS  +L          A + ALA  L                  +E+GG            D  L GHDWGAV  Y  AR    +  R + +VT+AVP         HPRQFL SWY+ F 
Sbjct:   19 ERGDGDR--LALCLHGFPDDAGSMDPLAERLADAGFTAVAPYMRGYGP-TGEAPDSDYSARALG---------ADAVALADRL------------------VEDGGYD----------DAVLVGHDWGAVAGYSAARI---DPDRFSKLVTMAVPPRFGAAIWDHPRQFLRSWYVWFF 153          
BLAST of EWM22334.1 vs. NCBI_GenBank
Match: gi|916910510|ref|WP_051517223.1| (epoxide hydrolase [Deinococcus phoenicis] >gi|597708193|gb|EYB68425.1| Alpha/beta hydrolase fold protein [Deinococcus phoenicis])

HSP 1 Score: 68.9366 bits (167), Expect = 1.519e-9
Identity = 57/171 (33.33%), Postives = 78/171 (45.61%), Query Frame = 0
Query:  136 PLLFLLHGFPDDASTFHAQVLPFARAGFDVLLPVMPGYEPSTALLPSSSYSLPSLATMLEDVIAWAQSPALARALRGGEAEGGKGEEGQQGGWLEEGGIGEEECRNPLPRDVHLFGHDWGAVLAYILARKGSREKVRVTSVVTVAVPH-EAARGFLTHPRQFLNSWYMLFI 305
            PL+ LLHGFP+    +  Q+ P ARAGF V++P + GY  S      ++Y L +L +   DV A      L RAL         G E           +G E          H+ GHDWG ++A+ LA    R+   V  +V +  PH  AAR     P Q+  SWY+ F 
Sbjct:   30 PLVVLLHGFPEFWRAWERQIGPLARAGFRVVVPDLRGYNLSEKPPGVAAYRLHTLQS---DVAA------LIRAL---------GHER----------VGHERA--------HVVGHDWGGIIAWALA---IRQPEVVERLVILNAPHPAAARRVFRKPAQWRRSWYIFFF 161          
The following BLAST results are available for this feature:
BLAST of EWM22334.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585102832|gb|EWM22334.1|0.000e+0100.00hypothetical protein Naga_100277g2 [Nannochloropsi... [more]
gi|553189562|ref|XP_005855027.1|1.357e-3587.50alpha beta hydrolase fold protein [Nannochloropsis... [more]
gi|1088944276|emb|SDX15171.1|1.723e-1837.79Pimeloyl-ACP methyl ester carboxylesterase [Marino... [more]
gi|1194672775|ref|WP_086001454.1|4.347e-1536.07epoxide hydrolase [Plesiocystis pacifica][more]
gi|149818805|gb|EDM78247.1|1.062e-1436.41hypothetical protein PPSIR1_08681 [Plesiocystis pa... [more]
gi|1094769334|emb|SEN00265.1|2.629e-1235.39Pimeloyl-ACP methyl ester carboxylesterase [Halori... [more]
gi|916910510|ref|WP_051517223.1|1.519e-933.33epoxide hydrolase [Deinococcus phoenicis] >gi|5977... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8361rna8361Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications