EWM22340.1, cds8332 (CDS) Nannochloropsis gaditana

Overview
NameEWM22340.1
Unique Namecds8332
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:472061..473779 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22340.1
Productcryptic tubulin
Orig transcript idgnl|cribi|Naga_100230g3.2211.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:472061..473779 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005198structural molecule activity
GO:0000166nucleotide binding
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0005200structural constituent of cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0051258protein polymerization
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005874microtubule
Vocabulary: INTERPRO
TermDefinition
IPR008280Tub_FtsZ_C
IPR017975Tubulin_CS
IPR023123Tubulin_C
IPR003008Tubulin_FtsZ_GTPase
IPR002967Delta_tubulin
IPR000217Tubulin
Homology
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|585102839|gb|EWM22340.1| (cryptic tubulin [Nannochloropsis gaditana])

HSP 1 Score: 1182.93 bits (3059), Expect = 0.000e+0
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0
Query:    1 MVSATLHVHIGQCGNQIGEQFWSLAADDFAAAADNGDASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSTFTLNALSEHADTVLYRDNDQLLGEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSSWSTSTATTLPTSSVSFKAAAGHGLHHLPDGRLGGAGGGQWADECVYLGKDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSSSSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYDELGSGSDRALRDMSGRRRIRDYR 572
            MVSATLHVHIGQCGNQIGEQFWSLAADDFAAAADNGDASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSTFTLNALSEHADTVLYRDNDQLLGEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSSWSTSTATTLPTSSVSFKAAAGHGLHHLPDGRLGGAGGGQWADECVYLGKDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSSSSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYDELGSGSDRALRDMSGRRRIRDYR
Sbjct:    1 MVSATLHVHIGQCGNQIGEQFWSLAADDFAAAADNGDASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSTFTLNALSEHADTVLYRDNDQLLGEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSSWSTSTATTLPTSSVSFKAAAGHGLHHLPDGRLGGAGGGQWADECVYLGKDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSSSSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYDELGSGSDRALRDMSGRRRIRDYR 572          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|553184590|ref|XP_005854116.1| (beta-tubulin, partial [Nannochloropsis gaditana CCMP526] >gi|422294946|gb|EKU22245.1| beta-tubulin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 224.942 bits (572), Expect = 3.921e-68
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query:   64 SEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVG 173
            SEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVG
Sbjct:    1 SEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVG 110          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|553184587|ref|XP_005854115.1| (cryptic tubulin, partial [Nannochloropsis gaditana CCMP526] >gi|422294945|gb|EKU22244.1| cryptic tubulin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 188.734 bits (478), Expect = 1.406e-54
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query:  483 PFSSSSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYDELGSGSDRALRDMSGRRRIRDYR 572
            PFSSSSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYDELGSGSDRALRDMSGRRRIRDYR
Sbjct:    1 PFSSSSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYDELGSGSDRALRDMSGRRRIRDYR 90          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|970663893|gb|KUG00955.1| (Tubulin delta chain [Phytophthora nicotianae])

HSP 1 Score: 177.563 bits (449), Expect = 1.917e-45
Identity = 171/597 (28.64%), Postives = 245/597 (41.04%), Query Frame = 0
Query:    5 TLHVHIGQCGNQIGEQFWSLAA------DDFAAAADNG----------------DASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDR-LRKNSRLASVLRKEACITDSSGRANNWAMGF----------TSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFST-GDCATQWYNSTFTLNALSEHADTVLYRDNDQLL--GEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSS-WS----TSTATTLPTSSVSFKAAAGHGLHHLP---DGRLGGAGGGQWADECVYLG------KDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSS--SSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYD 549
            ++H+H+GQCGNQ+G  +W LAA      DD  +  D G                + S  +   P PLFH   G A  + VDSE KVV   +++ +  A+         + +GR NNWAMG+          T +   +   R L    ++ L+RE+ER+D  Q  V+ HSL GGTGSG+G  + + +R+  P   I T SV P  T GD   Q YN+  TL  L + AD V+Y+DND+LL    Y + A   E  G               + S+  +N   AADLA LLFP      + T      R ++   L HD  P   AK ++ RS  W     + T + LP      K  +   L H P     R+        AD    LG      +   ASFP       +  T+A+   +RG +                         P      R + +  +  QT+    PP PW   +                                P +    S PA  PFSS      V IC N  H  ++ ++ L RA+   +  AY+HW+ +HG+ED DF  AF+    +  EY+
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAVSLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWK-AVVHERVGTDNY----------QRVSLEEVNSMAAADLAGLLFP------VATGDASTVRRFNFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADXDASLGMLEKLVQQTTASFPR-----NSRTTIASSTVIRGFN-------------------------PVAYEADRFTEKLGKVVQTA---FPPVPWLANM--------------------------------PQVTLSYSKPA--PFSSLQVQASVTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYE 514          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|567995818|gb|ETL45946.1| (hypothetical protein L916_04077 [Phytophthora parasitica] >gi|570992821|gb|ETP50237.1| hypothetical protein F442_04233 [Phytophthora parasitica P10297] >gi|970645387|gb|KUF85870.1| Tubulin delta chain [Phytophthora nicotianae] >gi|970652359|gb|KUF91037.1| Dual specificity protein phosphatase 1B [Phytophthora nicotianae])

HSP 1 Score: 176.792 bits (447), Expect = 4.378e-45
Identity = 171/597 (28.64%), Postives = 245/597 (41.04%), Query Frame = 0
Query:    5 TLHVHIGQCGNQIGEQFWSLAA------DDFAAAADNG----------------DASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDR-LRKNSRLASVLRKEACITDSSGRANNWAMGF----------TSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFST-GDCATQWYNSTFTLNALSEHADTVLYRDNDQLL--GEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSS-WS----TSTATTLPTSSVSFKAAAGHGLHHLP---DGRLGGAGGGQWADECVYLG------KDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSS--SSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYD 549
            ++H+H+GQCGNQ+G  +W LAA      DD  +  D G                + S  +   P PLFH   G A  + VDSE KVV   +++ +  A+         + +GR NNWAMG+          T +   +   R L    ++ L+RE+ER+D  Q  V+ HSL GGTGSG+G  + + +R+  P   I T SV P  T GD   Q YN+  TL  L + AD V+Y+DND+LL    Y + A   E  G               + S+  +N   AADLA LLFP      + T      R ++   L HD  P   AK ++ RS  W     + T + LP      K  +   L H P     R+        AD    LG      +   ASFP       +  T+A+   +RG +                         P      R + +  +  QT+    PP PW   +                                P +    S PA  PFSS      V IC N  H  ++ ++ L RA+   +  AY+HW+ +HG+ED DF  AF+    +  EY+
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAVSLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWK-AVVHERVGTDNY----------QRVSLEEVNSMAAADLAGLLFP------VATGDASTVRRFNFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLEKLVQQTTASFPR-----NSRTTIASSTVIRGFN-------------------------PVAYEADRFTEKLGKVVQTA---FPPVPWLANM--------------------------------PQVTLSYSKPA--PFSSLQVQASVTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYE 514          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|566029739|gb|ETI52650.1| (hypothetical protein F443_04266 [Phytophthora parasitica P1569])

HSP 1 Score: 174.866 bits (442), Expect = 2.040e-44
Identity = 170/597 (28.48%), Postives = 245/597 (41.04%), Query Frame = 0
Query:    5 TLHVHIGQCGNQIGEQFWSLAA------DDFAAAADNG----------------DASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDR-LRKNSRLASVLRKEACITDSSGRANNWAMGF----------TSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFST-GDCATQWYNSTFTLNALSEHADTVLYRDNDQLL--GEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSS-WS----TSTATTLPTSSVSFKAAAGHGLHHLP---DGRLGGAGGGQWADECVYLG------KDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSS--SSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYD 549
            ++H+H+GQCGNQ+G  +W LAA      DD  +  + G                + S  +   P PLFH   G A  + VDSE KVV   +++ +  A+         + +GR NNWAMG+          T +   +   R L    ++ L+RE+ER+D  Q  V+ HSL GGTGSG+G  + + +R+  P   I T SV P  T GD   Q YN+  TL  L + AD V+Y+DND+LL    Y + A   E  G               + S+  +N   AADLA LLFP      + T      R ++   L HD  P   AK ++ RS  W     + T + LP      K  +   L H P     R+        AD    LG      +   ASFP       +  T+A+   +RG +                         P      R + +  +  QT+    PP PW   +                                P +    S PA  PFSS      V IC N  H  ++ ++ L RA+   +  AY+HW+ +HG+ED DF  AF+    +  EY+
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAVSLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWK-AVVHERVGTDNY----------QRVSLEEVNSMAAADLAGLLFP------VATGDASTVRRFNFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGILEKLVQQTTASFPR-----NSRTTIASSTVIRGFN-------------------------PVAYEADRFTEKLGKVVQTA---FPPVPWLANM--------------------------------PQVTLSYSKPA--PFSSLQVQASVTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYE 514          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|570333344|gb|ETO81292.1| (hypothetical protein F444_04322 [Phytophthora parasitica P1976])

HSP 1 Score: 174.096 bits (440), Expect = 3.509e-44
Identity = 169/597 (28.31%), Postives = 243/597 (40.70%), Query Frame = 0
Query:    5 TLHVHIGQCGNQIGEQFWSLAA------DDFAAAADNG----------------DASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDR-LRKNSRLASVLRKEACITDSSGRANNWAMGF----------TSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFST-GDCATQWYNSTFTLNALSEHADTVLYRDNDQLL--GEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSS-WS----TSTATTLPTSSVSFKAAAGHGLHHLP---DGRLGGAGGGQWADECVYLG------KDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSS--SSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYD 549
            ++H+H+GQCGNQ+G  +W LA       DD  +  D G                + S  +   P PLFH   G A  + VDSE KVV   +++ +  A+         + +GR NNWAMG+          T +   +   R L    ++ L+RE+ER+D  Q  V+ HSL GGTGSG+G  + + +R+  P   I T SV P  T GD   Q YN+  TL  L + AD V+Y+DND+LL    Y + A   E  G               + S+  +N   AADLA LLFP      + T      R ++   L HD  P   AK ++ RS  W     + T +  P      K  +   L H P     R+        AD    LG      +   ASFP       +  T+A+   +RG +                         P      R + +  +  QT+    PP PW   +                                P +    S PA  PFSS      V IC N  H  ++ ++ L RA+   +  AY+HW+ +HG+ED DF  AF+    +  EY+
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAVSLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWK-AVVHERVGTDNY----------QRVSLEEVNSMAAADLAGLLFP------VATGDASTVRRFNFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADVDASLGMLEKLVQQTTASFPR-----NSRTTIASSTVIRGFN-------------------------PVAYEADRFTEKLGKVVQTA---FPPVPWLANM--------------------------------PQVTLSYSKPA--PFSSLQVQASVTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYE 514          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|675185151|ref|XP_008901460.1| (hypothetical protein PPTG_08269 [Phytophthora parasitica INRA-310] >gi|568025085|gb|ETL99105.1| hypothetical protein L917_03978 [Phytophthora parasitica] >gi|568055510|gb|ETM52255.1| hypothetical protein L914_04089 [Phytophthora parasitica] >gi|568098712|gb|ETN13439.1| hypothetical protein PPTG_08269 [Phytophthora parasitica INRA-310])

HSP 1 Score: 173.711 bits (439), Expect = 4.838e-44
Identity = 169/597 (28.31%), Postives = 243/597 (40.70%), Query Frame = 0
Query:    5 TLHVHIGQCGNQIGEQFWSLAA------DDFAAAADNG----------------DASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDR-LRKNSRLASVLRKEACITDSSGRANNWAMGF----------TSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFST-GDCATQWYNSTFTLNALSEHADTVLYRDNDQLL--GEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSS-WS----TSTATTLPTSSVSFKAAAGHGLHHLP---DGRLGGAGGGQWADECVYLG------KDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSS--SSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYD 549
            ++H+H+GQCGNQ+G  +W LA       DD  +  D G                + S  +   P PLFH   G A  + VDSE KVV   +++ +  A+         + +GR NNWAMG+          T +   +   R L    ++ L+RE+ER+D  Q  V+ HSL GGTGSG+G  + + +R+  P   I T SV P  T GD   Q YN+  TL  L + AD V+Y+DND+LL    Y + A   E  G               + S+  +N   AADLA LLFP      + T      R ++   L HD  P   AK ++ RS  W     + T +  P      K  +   L H P     R+        AD    LG      +   ASFP       +  T+A+   +RG +                         P      R + +  +  QT+    PP PW   +                                P +    S PA  PFSS      V IC N  H  ++ ++ L RA+   +  AY+HW+ +HG+ED DF  AF+    +  EY+
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAVSLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWK-AVVHERVGTDNY----------QRVSLEEVNSMAAADLAGLLFP------VATGDASTVRRFNFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLEKLVQQTTASFPR-----NSRTTIASSTVIRGFN-------------------------PVAYEADRFTEKLGKVVQTA---FPPVPWLANM--------------------------------PQVTLSYSKPA--PFSSLQVQASVTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYE 514          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|567967360|gb|ETK92539.1| (hypothetical protein L915_04123 [Phytophthora parasitica])

HSP 1 Score: 173.711 bits (439), Expect = 5.403e-44
Identity = 169/597 (28.31%), Postives = 244/597 (40.87%), Query Frame = 0
Query:    5 TLHVHIGQCGNQIGEQFWSLAA------DDFAAAADNG----------------DASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDR-LRKNSRLASVLRKEACITDSSGRANNWAMGF----------TSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFST-GDCATQWYNSTFTLNALSEHADTVLYRDNDQLL--GEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSS-WS----TSTATTLPTSSVSFKAAAGHGLHHLP---DGRLGGAGGGQWADECVYLG------KDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSS--SSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYD 549
            ++H+H+GQCGNQ+G  +W LAA      DD  +  + G                + S  +   P PLFH   G A  + VDSE KVV   +++ +  A+         + +GR NNWAMG+          T +   +   R L    ++ L+RE+ER+D  Q  V+ HSL GGTGSG+G  + + +R+  P   I T SV P  T GD   Q YN+  TL  L + AD V+Y+DND+LL    Y + A   E  G               + S+  +N   AADLA LLFP      + T      R ++   L HD  P   AK ++ RS  W     + T +  P      K  +   L H P     R+        AD    LG      +   ASFP       +  T+A+   +RG +                         P      R + +  +  QT+    PP PW   +                                P +    S PA  PFSS      V IC N  H  ++ ++ L RA+   +  AY+HW+ +HG+ED DF  AF+    +  EY+
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAVSLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWK-AVVHERVGTDNY----------QRVSLEEVNSMAAADLAGLLFP------VATGDASTVRRFNFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLEKLVQQTTASFPR-----NSRTTIASSTVIRGFN-------------------------PVAYEADRFTEKLGKVVQTA---FPPVPWLANM--------------------------------PQVTLSYSKPA--PFSSLQVQASVTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYE 514          
BLAST of EWM22340.1 vs. NCBI_GenBank
Match: gi|570957378|gb|ETP22357.1| (hypothetical protein F441_04214 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 172.17 bits (435), Expect = 2.135e-43
Identity = 168/597 (28.14%), Postives = 243/597 (40.70%), Query Frame = 0
Query:    5 TLHVHIGQCGNQIGEQFWSLAA------DDFAAAADNG----------------DASSFSPQYPHPLFHEQDGRAAAVFVDSEAKVVDR-LRKNSRLASVLRKEACITDSSGRANNWAMGF----------TSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFST-GDCATQWYNSTFTLNALSEHADTVLYRDNDQLL--GEYLRVAGAAEGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCGGGGYRAWDALALQHDCTPFKYAKFVDNRSS-WS----TSTATTLPTSSVSFKAAAGHGLHHLP---DGRLGGAGGGQWADECVYLG------KDVIASFPTEDGRGKANVTLAAQMTVRGVDLPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSPIGTVFSSHSQPSILPCTSMPAARPFSS--SSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYD 549
            ++H+H+GQCGNQ+G  +W LA       DD  +  + G                + S  +   P PLFH   G A  + VDSE KVV   +++ +  A+         + +GR NNWAMG+          T +   +   R L    ++ L+RE+ER+D  Q  V+ HSL GGTGSG+G  + + +R+  P   I T SV P  T GD   Q YN+  TL  L + AD V+Y+DND+LL    Y + A   E  G               + S+  +N   AADLA LLFP      + T      R ++   L HD  P   AK ++ RS  W     + T +  P      K  +   L H P     R+        AD    LG      +   ASFP       +  T+A+   +RG +                         P      R + +  +  QT+    PP PW   +                                P +    S PA  PFSS      V IC N  H  ++ ++ L RA+   +  AY+HW+ +HG+ED DF  AF+    +  EY+
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAVSLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWK-AVVHERVGTDNY----------QRVSLEEVNSMAAADLAGLLFP------VATGDASTVRRFNFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLEKLVQQTTASFPR-----NSRTTIASSTVIRGFN-------------------------PVAYEADRFTEKLGKVVQTA---FPPVPWLANM--------------------------------PQVTLSYSKPA--PFSSLQVQASVTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYE 514          
The following BLAST results are available for this feature:
BLAST of EWM22340.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102839|gb|EWM22340.1|0.000e+0100.00cryptic tubulin [Nannochloropsis gaditana][more]
gi|553184590|ref|XP_005854116.1|3.921e-68100.00beta-tubulin, partial [Nannochloropsis gaditana CC... [more]
gi|553184587|ref|XP_005854115.1|1.406e-54100.00cryptic tubulin, partial [Nannochloropsis gaditana... [more]
gi|970663893|gb|KUG00955.1|1.917e-4528.64Tubulin delta chain [Phytophthora nicotianae][more]
gi|567995818|gb|ETL45946.1|4.378e-4528.64hypothetical protein L916_04077 [Phytophthora para... [more]
gi|566029739|gb|ETI52650.1|2.040e-4428.48hypothetical protein F443_04266 [Phytophthora para... [more]
gi|570333344|gb|ETO81292.1|3.509e-4428.31hypothetical protein F444_04322 [Phytophthora para... [more]
gi|675185151|ref|XP_008901460.1|4.838e-4428.31hypothetical protein PPTG_08269 [Phytophthora para... [more]
gi|567967360|gb|ETK92539.1|5.403e-4428.31hypothetical protein L915_04123 [Phytophthora para... [more]
gi|570957378|gb|ETP22357.1|2.135e-4328.14hypothetical protein F441_04214 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8359rna8359Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications