EWM22344.1, cds8328 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|585102843|gb|EWM22344.1| (alpha beta hydrolase fold protein [Nannochloropsis gaditana]) HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query: 1 MPRPHARLSAHSLFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEEGKGGRV 353
MPRPHARLSAHSLFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEEGKGGRV
Sbjct: 1 MPRPHARLSAHSLFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEEGKGGRV 353
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|553180490|ref|XP_005853412.1| (alpha beta hydrolase fold protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295649|gb|EKU22948.1| alpha beta hydrolase fold protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 467.618 bits (1202), Expect = 1.587e-164 Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0
Query: 13 LFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIP 244
+FCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIP
Sbjct: 1 MFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIP 232
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1100134454|emb|SFF27052.1| (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Nannocystis exedens]) HSP 1 Score: 181.415 bits (459), Expect = 2.292e-51 Identity = 116/252 (46.03%), Postives = 154/252 (61.11%), Query Frame = 0
Query: 92 SVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFL 343
S PPLV++GG QT++SW G + LS +R +IVYE RGQG+T LDLSD + VHV DF R+ AL + GPVDLCGFSFGGR++L +AA P +RRLVL+GV A R A+GR+I+++WR AL G L W S+ G +L+ E+ + +V NT AG+ A+ +++ + P+ L LAPRV+AP LLL D++A A E+ LA A G P GH EAA WR VL FL
Sbjct: 31 SAAPPLVILGGMTQTLSSWGGQVRPLSAQRPVIVYEARGQGQTR-LDLSDVTPPVHVGDFERLLDALGVAGPVDLCGFSFGGRIALAIAAERPERLRRLVLSGVSAGRGALGRVIVRAWREALRTGDLGALAWISLGDTLGPRYLAANEAVLEAFVKATVERNTFAGISALFSQTMNDAPDSPWAPLALAPRVQAPALLLAGALDRLAPAAELDALAAAFPHGARAEILPDVGHTVAIEAAERWRALVLEFL 281
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|551568739|ref|XP_005770325.1| (hypothetical protein EMIHUDRAFT_209930 [Emiliania huxleyi CCMP1516] >gi|485621452|gb|EOD17896.1| hypothetical protein EMIHUDRAFT_209930 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 134.42 bits (337), Expect = 2.570e-33 Identity = 98/260 (37.69%), Postives = 139/260 (53.46%), Query Frame = 0
Query: 91 ASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALK-IEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVED-PYHTLQLAPRVEAPTLLLGAL-----DDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFL 343
AS PLVLIGGT Q + SW HI G R R L++YET GQG+ DLSD +L H D V AA + PVDL GFSFGGR+++ AA VRR+V T V + R A GR ++ A+L G +Q F + L + ++FL+++E+++P+WV + T G+ A++A + ++ E+ P HT +LA R+ + + G L +D +T LA GW GA H E WR+ V FL
Sbjct: 23 ASDFTPLVLIGGTGQWVDSWTTHISGF-RDRPLLLYETAGQGKVAH-DLSDMTLTRHTRDLQAVLAAAGWADRPVDLAGFSFGGRLAMAAAASGGLQVRRVVSTAVASRRTARGRFALRGCLASLRSGDMQGFGYQITLASYSSSFLAEHEARVPKWVDALARECTSEGVGAIIAETLATEEEEHPLHTERLASRIASAGAVEGGLIISGTEDAFSTLSSGADLARVA--GWEHLPIEGAAHAVPLEKPRAWRDAVKGFL 278
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|551597876|ref|XP_005781018.1| (hypothetical protein EMIHUDRAFT_204524 [Emiliania huxleyi CCMP1516] >gi|485633718|gb|EOD28589.1| hypothetical protein EMIHUDRAFT_204524 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 133.65 bits (335), Expect = 4.919e-33 Identity = 97/260 (37.31%), Postives = 139/260 (53.46%), Query Frame = 0
Query: 91 ASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALK-IEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVED-PYHTLQLAPRVEAPTLLLGAL-----DDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFL 343
AS PLVLIGGT Q + SW H+ G R R L++YET GQG+ DLSD +L H D V AA + PVDL GFSFGGR+++ AA VRR+V T V + R A GR ++ A+L G +Q F + L + ++FL+++E+++P+WV + T G+ A++A + ++ E+ P HT +LA R+ + + G L +D +T LA GW GA H E WR+ V FL
Sbjct: 23 ASDFTPLVLIGGTGQWVDSWTTHVSGF-RDRPLLLYETAGQGKVAH-DLSDMTLTRHTRDLQAVLAAAGWADRPVDLAGFSFGGRLAMAAAASGGLQVRRVVSTAVASRRTARGRFALRGCLASLRSGDMQGFGYQITLASYSSSFLAEHEARVPKWVDALARECTSEGVGAIIAETLATEEEEHPLHTERLASRIASAGAVEGGLIISGTEDAFSTLSSGADLARVA--GWEHLPIEGAAHAVPLEKPRAWRDAVKGFL 278
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|223993211|ref|XP_002286289.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977604|gb|EED95930.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 120.553 bits (301), Expect = 5.110e-27 Identity = 101/340 (29.71%), Postives = 146/340 (42.94%), Query Frame = 0
Query: 95 PPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQG--------------RTTDLDLSDASLAVHVEDFCRV-----------HAALKIEG-----------PVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGM------------------------------LQEFVWNSMLHCHGAAFL-SKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHT---------------LQLAPRVEAPTLLLGALDDKVATALEIKRLAE--------AGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLD 344
PPLV++GG AQ+I+SW H+ L + R ++VYE GQG T D D SL DF V H I G VD+ GFSFGGRV++ A L P VRRL L+GV AERDA +++ SW+ L G L+ F W+ +L + FL S ++ WV V NT GLR+++ ++H S ++D T + + VE+ +++G+ +DK++ + +LAE +G PG GH + EA WRE+VL FL+
Sbjct: 101 PPLVVLGGMAQSISSWEFHLPHLCKDRSVLVYEALGQGPPPPTEVCSVDGKEVTLDQYYDDVSLERQGRDFWEVIQEAFFDDDSYHYQHYISGQADGNDIVKNKKVDVAGFSFGGRVAMAAATLKPNGVRRLHLSGVGAERDAYASVVLASWKDMLGAGSSDGEVCEGSDDMNNDEECDPESHSSRCTTRLRAFAWSIILATYAERFLASAGPVRVQSWVDSVCRYNTEEGLRSLLMQTHGSFLDDNDETSTDQDKWTPTAMALRIHKSQAVESCRIVVGS-EDKMSAPNQALKLAELLGYEEDQSGGTNCYYKVIPGHGHAVLMEAMRAWREDVLGFLN 439
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1210523610|dbj|GAX17570.1| (hypothetical protein FisN_18Lh221 [Fistulifera solaris]) HSP 1 Score: 110.538 bits (275), Expect = 1.885e-24 Identity = 75/239 (31.38%), Postives = 119/239 (49.79%), Query Frame = 0
Query: 102 GTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPV-HFFPGAGHNCVFEAAVLWREEV 339
G AQ+IA+W H+ L++ R +++YE G G + SD SL + + V + GFS GGR+++ + HP +R+L LTGV ER G+L + W L+ G ++ F W+++L + A+L + + KIP WV + ++V GLR ++ ++H D + + +A R+ L +D + E LA A GW AGH EA LWRE+V
Sbjct: 49 GMAQSIAAWESHVPALAKDRHVLIYEPMGIGPYQE-AWSDVSLPAQADRLDETLQTIWDNEAVHVAGFSLGGRIAMALGCQHPERLRKLHLTGVSLERSDGGQLQLMGWLDHLEHGSIRSFAWSAILATYSPAYLIQQKEKIPLWVESICKTHSVHGLRLLLEQAH--DHDPAWSVAAMAQRLRVLGHLCVGENDMLGHNTE--GLAHA--LGWLAPTIVSAAGHAVPMEAGRLWREDV 280
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1210523371|dbj|GAX18008.1| (hypothetical protein FisN_18Hh221 [Fistulifera solaris]) HSP 1 Score: 109.383 bits (272), Expect = 4.977e-24 Identity = 73/239 (30.54%), Postives = 118/239 (49.37%), Query Frame = 0
Query: 102 GTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPV-HFFPGAGHNCVFEAAVLWREEV 339
G AQ+IA+W H+ L++ R +++YE G G + SD SL + + + V + GFS GGR+ + + HP + +L L GV ER G+L + W L L+ F W+++L + A+L +++ KIP WV + ++V GLR ++ ++H D + + + +A R+ L +D + + LA A GW P AGH EA LWRE+V
Sbjct: 49 GMAQSIAAWESHVPALAKDRHVLIYEPMGIGPYQE-TWSDVSLPAQADRLEEILQTIWGNEAVHVTGFSLGGRIGMALGCQHPERLPKLHLAGVSLERSDAGQLQLLGWLDHLQHENLRAFAWSAILATYSPAYLMQHKKKIPLWVDSICQTHSVQGLRLLLEQAH--DHDPAWSVVAMAQRLHVSGHLCVGENDILGH--DAAGLANA--LGWDAPTIVPAAGHAVPMEAGRLWREDV 280
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1072862159|gb|OEU62836.1| (hypothetical protein BA867_03575 [Desulfobacterales bacterium S5133MH16]) HSP 1 Score: 102.834 bits (255), Expect = 8.630e-22 Identity = 82/265 (30.94%), Postives = 118/265 (44.53%), Query Frame = 0
Query: 89 GTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTL-------QLAPRVEAPTLLLGALDDKVATALEIKRLAEA--GRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLD 344
G S P + + GT Q W H L + R+++Y+ R QG++ DL SL H EDF + L++E +L G S G +V+L AA P V RLVL V A + RLI+KSW L L+ W S+ G FL + + + V +AMV R+ + D + Q+A V P L+L D + T + K+LA GR + G GH+ EA ++ + VL FLD
Sbjct: 18 GFESSQPVVAFLNGTMQNTVYWRTHCLALKDRFRVLMYDARAQGKS-DLGHGKLSLEGHAEDFSALLQYLRVE-KTNLIGLSHGAQVALAYAAHSPECVDRLVLCSVGARQTCRARLILKSWLKVLKSSDLETLAWVSLPVAFGENFLKQQQGILDHIV------------KAMVKRNKKQALIDHLEAISVYPLLSQIAQNVHRPVLVLSGSHDLLVTESDAKQLAMVCDGRH----NHLTGIGHSIPAEAPEVFTKTVLQFLD 264
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1072232029|gb|OEU16761.1| (alpha/beta-hydrolase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 102.834 bits (255), Expect = 8.351e-21 Identity = 83/343 (24.20%), Postives = 141/343 (41.11%), Query Frame = 0
Query: 88 PGTAS-VPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIV-----------------------------------------------YETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAAL-------------------HPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGM-LQEFVWNSMLHCHGAAFLSKY-ESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRV--------------EAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEE 347
P T + + PPL+L+GG AQT +SW H+ L++ R++I+ Y GQ + L++ + + F + VD+ GFSFGGRV++ A L H +R+L LTGV +R G L +KS+ + + L+ F W+ +L + + +L E+K+ ++ + S N GL +++ +S +D+ DP+H + +A R+ + +G D K+A E++ L + + P+ GH V E WRE V++FLD E
Sbjct: 83 PATQNDIYPPLILLGGIAQTKSSWDHHLTSLTKSRKVILYECLGQGLGLGGLGDGVETMATKTAATMTPDDNFDNNISNDNNDCDDYSLLGQAQRLLETLNNINNVI----FTENDNSNNDNNYVDIVGFSFGGRVAMAAACLQQQEVQQLQQQPNNNNEGRHKIRIRKLHLTGVGCDRSDFGHLAMKSFHGIIHNDISLRSFAWSILLSTYSSKYLYNLSENKLERFIDHICSTNNPMGLLSILEQSEINDITDPWHVINMADRIVNANINSNNNSNNTINGKICVGEFD-KMAPINEVESLRKKLQWETPIDILSDCGHAAVMEKPRAWRESVISFLDDNE 420 The following BLAST results are available for this feature:
BLAST of EWM22344.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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