EWM22344.1, cds8328 (CDS) Nannochloropsis gaditana

Overview
NameEWM22344.1
Unique Namecds8328
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:460386..461447 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22344.1
Productalpha beta hydrolase fold protein
Orig transcript idgnl|cribi|Naga_100230g7.2215.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:460386..461447 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR000073AB_hydrolase_1
Homology
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|585102843|gb|EWM22344.1| (alpha beta hydrolase fold protein [Nannochloropsis gaditana])

HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query:    1 MPRPHARLSAHSLFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEEGKGGRV 353
            MPRPHARLSAHSLFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEEGKGGRV
Sbjct:    1 MPRPHARLSAHSLFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEEGKGGRV 353          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|553180490|ref|XP_005853412.1| (alpha beta hydrolase fold protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295649|gb|EKU22948.1| alpha beta hydrolase fold protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 467.618 bits (1202), Expect = 1.587e-164
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0
Query:   13 LFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIP 244
            +FCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIP
Sbjct:    1 MFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTFVSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIP 232          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1100134454|emb|SFF27052.1| (2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Nannocystis exedens])

HSP 1 Score: 181.415 bits (459), Expect = 2.292e-51
Identity = 116/252 (46.03%), Postives = 154/252 (61.11%), Query Frame = 0
Query:   92 SVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFL 343
            S  PPLV++GG  QT++SW G +  LS +R +IVYE RGQG+T  LDLSD +  VHV DF R+  AL + GPVDLCGFSFGGR++L +AA  P  +RRLVL+GV A R A+GR+I+++WR AL  G L    W S+    G  +L+  E+ +  +V      NT AG+ A+ +++     + P+  L LAPRV+AP LLL    D++A A E+  LA A   G      P  GH    EAA  WR  VL FL
Sbjct:   31 SAAPPLVILGGMTQTLSSWGGQVRPLSAQRPVIVYEARGQGQTR-LDLSDVTPPVHVGDFERLLDALGVAGPVDLCGFSFGGRIALAIAAERPERLRRLVLSGVSAGRGALGRVIVRAWREALRTGDLGALAWISLGDTLGPRYLAANEAVLEAFVKATVERNTFAGISALFSQTMNDAPDSPWAPLALAPRVQAPALLLAGALDRLAPAAELDALAAAFPHGARAEILPDVGHTVAIEAAERWRALVLEFL 281          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|551568739|ref|XP_005770325.1| (hypothetical protein EMIHUDRAFT_209930 [Emiliania huxleyi CCMP1516] >gi|485621452|gb|EOD17896.1| hypothetical protein EMIHUDRAFT_209930 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 134.42 bits (337), Expect = 2.570e-33
Identity = 98/260 (37.69%), Postives = 139/260 (53.46%), Query Frame = 0
Query:   91 ASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALK-IEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVED-PYHTLQLAPRVEAPTLLLGAL-----DDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFL 343
            AS   PLVLIGGT Q + SW  HI G  R R L++YET GQG+    DLSD +L  H  D   V AA    + PVDL GFSFGGR+++  AA     VRR+V T V + R A GR  ++   A+L  G +Q F +   L  + ++FL+++E+++P+WV  +    T  G+ A++A +  ++ E+ P HT +LA R+ +   + G L     +D  +T      LA     GW      GA H    E    WR+ V  FL
Sbjct:   23 ASDFTPLVLIGGTGQWVDSWTTHISGF-RDRPLLLYETAGQGKVAH-DLSDMTLTRHTRDLQAVLAAAGWADRPVDLAGFSFGGRLAMAAAASGGLQVRRVVSTAVASRRTARGRFALRGCLASLRSGDMQGFGYQITLASYSSSFLAEHEARVPKWVDALARECTSEGVGAIIAETLATEEEEHPLHTERLASRIASAGAVEGGLIISGTEDAFSTLSSGADLARVA--GWEHLPIEGAAHAVPLEKPRAWRDAVKGFL 278          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|551597876|ref|XP_005781018.1| (hypothetical protein EMIHUDRAFT_204524 [Emiliania huxleyi CCMP1516] >gi|485633718|gb|EOD28589.1| hypothetical protein EMIHUDRAFT_204524 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 133.65 bits (335), Expect = 4.919e-33
Identity = 97/260 (37.31%), Postives = 139/260 (53.46%), Query Frame = 0
Query:   91 ASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALK-IEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVED-PYHTLQLAPRVEAPTLLLGAL-----DDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFL 343
            AS   PLVLIGGT Q + SW  H+ G  R R L++YET GQG+    DLSD +L  H  D   V AA    + PVDL GFSFGGR+++  AA     VRR+V T V + R A GR  ++   A+L  G +Q F +   L  + ++FL+++E+++P+WV  +    T  G+ A++A +  ++ E+ P HT +LA R+ +   + G L     +D  +T      LA     GW      GA H    E    WR+ V  FL
Sbjct:   23 ASDFTPLVLIGGTGQWVDSWTTHVSGF-RDRPLLLYETAGQGKVAH-DLSDMTLTRHTRDLQAVLAAAGWADRPVDLAGFSFGGRLAMAAAASGGLQVRRVVSTAVASRRTARGRFALRGCLASLRSGDMQGFGYQITLASYSSSFLAEHEARVPKWVDALARECTSEGVGAIIAETLATEEEEHPLHTERLASRIASAGAVEGGLIISGTEDAFSTLSSGADLARVA--GWEHLPIEGAAHAVPLEKPRAWRDAVKGFL 278          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|223993211|ref|XP_002286289.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977604|gb|EED95930.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 120.553 bits (301), Expect = 5.110e-27
Identity = 101/340 (29.71%), Postives = 146/340 (42.94%), Query Frame = 0
Query:   95 PPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQG--------------RTTDLDLSDASLAVHVEDFCRV-----------HAALKIEG-----------PVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGM------------------------------LQEFVWNSMLHCHGAAFL-SKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHT---------------LQLAPRVEAPTLLLGALDDKVATALEIKRLAE--------AGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLD 344
            PPLV++GG AQ+I+SW  H+  L + R ++VYE  GQG               T D    D SL     DF  V           H    I G            VD+ GFSFGGRV++  A L P  VRRL L+GV AERDA   +++ SW+  L  G                               L+ F W+ +L  +   FL S    ++  WV  V   NT  GLR+++ ++H S ++D   T               +  +  VE+  +++G+ +DK++   +  +LAE        +G         PG GH  + EA   WRE+VL FL+
Sbjct:  101 PPLVVLGGMAQSISSWEFHLPHLCKDRSVLVYEALGQGPPPPTEVCSVDGKEVTLDQYYDDVSLERQGRDFWEVIQEAFFDDDSYHYQHYISGQADGNDIVKNKKVDVAGFSFGGRVAMAAATLKPNGVRRLHLSGVGAERDAYASVVLASWKDMLGAGSSDGEVCEGSDDMNNDEECDPESHSSRCTTRLRAFAWSIILATYAERFLASAGPVRVQSWVDSVCRYNTEEGLRSLLMQTHGSFLDDNDETSTDQDKWTPTAMALRIHKSQAVESCRIVVGS-EDKMSAPNQALKLAELLGYEEDQSGGTNCYYKVIPGHGHAVLMEAMRAWREDVLGFLN 439          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1210523610|dbj|GAX17570.1| (hypothetical protein FisN_18Lh221 [Fistulifera solaris])

HSP 1 Score: 110.538 bits (275), Expect = 1.885e-24
Identity = 75/239 (31.38%), Postives = 119/239 (49.79%), Query Frame = 0
Query:  102 GTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPV-HFFPGAGHNCVFEAAVLWREEV 339
            G AQ+IA+W  H+  L++ R +++YE  G G   +   SD SL    +        +     V + GFS GGR+++ +   HP  +R+L LTGV  ER   G+L +  W   L+ G ++ F W+++L  +  A+L + + KIP WV  +   ++V GLR ++ ++H  D +  +    +A R+     L    +D +    E   LA A   GW        AGH    EA  LWRE+V
Sbjct:   49 GMAQSIAAWESHVPALAKDRHVLIYEPMGIGPYQE-AWSDVSLPAQADRLDETLQTIWDNEAVHVAGFSLGGRIAMALGCQHPERLRKLHLTGVSLERSDGGQLQLMGWLDHLEHGSIRSFAWSAILATYSPAYLIQQKEKIPLWVESICKTHSVHGLRLLLEQAH--DHDPAWSVAAMAQRLRVLGHLCVGENDMLGHNTE--GLAHA--LGWLAPTIVSAAGHAVPMEAGRLWREDV 280          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1210523371|dbj|GAX18008.1| (hypothetical protein FisN_18Hh221 [Fistulifera solaris])

HSP 1 Score: 109.383 bits (272), Expect = 4.977e-24
Identity = 73/239 (30.54%), Postives = 118/239 (49.37%), Query Frame = 0
Query:  102 GTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVATALEIKRLAEAGRRGWPV-HFFPGAGHNCVFEAAVLWREEV 339
            G AQ+IA+W  H+  L++ R +++YE  G G   +   SD SL    +    +   +     V + GFS GGR+ + +   HP  + +L L GV  ER   G+L +  W   L    L+ F W+++L  +  A+L +++ KIP WV  +   ++V GLR ++ ++H  D +  +  + +A R+     L    +D +    +   LA A   GW      P AGH    EA  LWRE+V
Sbjct:   49 GMAQSIAAWESHVPALAKDRHVLIYEPMGIGPYQE-TWSDVSLPAQADRLEEILQTIWGNEAVHVTGFSLGGRIGMALGCQHPERLPKLHLAGVSLERSDAGQLQLLGWLDHLQHENLRAFAWSAILATYSPAYLMQHKKKIPLWVDSICQTHSVQGLRLLLEQAH--DHDPAWSVVAMAQRLHVSGHLCVGENDILGH--DAAGLANA--LGWDAPTIVPAAGHAVPMEAGRLWREDV 280          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1072862159|gb|OEU62836.1| (hypothetical protein BA867_03575 [Desulfobacterales bacterium S5133MH16])

HSP 1 Score: 102.834 bits (255), Expect = 8.630e-22
Identity = 82/265 (30.94%), Postives = 118/265 (44.53%), Query Frame = 0
Query:   89 GTASVPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTL-------QLAPRVEAPTLLLGALDDKVATALEIKRLAEA--GRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLD 344
            G  S  P +  + GT Q    W  H   L  + R+++Y+ R QG++ DL     SL  H EDF  +   L++E   +L G S G +V+L  AA  P  V RLVL  V A +    RLI+KSW   L    L+   W S+    G  FL + +  +   V            +AMV R+    + D    +       Q+A  V  P L+L    D + T  + K+LA    GR     +   G GH+   EA  ++ + VL FLD
Sbjct:   18 GFESSQPVVAFLNGTMQNTVYWRTHCLALKDRFRVLMYDARAQGKS-DLGHGKLSLEGHAEDFSALLQYLRVE-KTNLIGLSHGAQVALAYAAHSPECVDRLVLCSVGARQTCRARLILKSWLKVLKSSDLETLAWVSLPVAFGENFLKQQQGILDHIV------------KAMVKRNKKQALIDHLEAISVYPLLSQIAQNVHRPVLVLSGSHDLLVTESDAKQLAMVCDGRH----NHLTGIGHSIPAEAPEVFTKTVLQFLD 264          
BLAST of EWM22344.1 vs. NCBI_GenBank
Match: gi|1072232029|gb|OEU16761.1| (alpha/beta-hydrolase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 102.834 bits (255), Expect = 8.351e-21
Identity = 83/343 (24.20%), Postives = 141/343 (41.11%), Query Frame = 0
Query:   88 PGTAS-VPPPLVLIGGTAQTIASWVGHIHGLSRKRRLIV-----------------------------------------------YETRGQGRTTDLDLSDASLAVHVEDFCRVHAALKIEGPVDLCGFSFGGRVSLGVAAL-------------------HPGLVRRLVLTGVPAERDAVGRLIIKSWRAALDRGM-LQEFVWNSMLHCHGAAFLSKY-ESKIPEWVAFVESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRV--------------EAPTLLLGALDDKVATALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEE 347
            P T + + PPL+L+GG AQT +SW  H+  L++ R++I+                                               Y   GQ +     L++ +  +    F     +      VD+ GFSFGGRV++  A L                   H   +R+L LTGV  +R   G L +KS+   +   + L+ F W+ +L  + + +L    E+K+  ++  + S N   GL +++ +S  +D+ DP+H + +A R+                  + +G  D K+A   E++ L +  +   P+      GH  V E    WRE V++FLD  E
Sbjct:   83 PATQNDIYPPLILLGGIAQTKSSWDHHLTSLTKSRKVILYECLGQGLGLGGLGDGVETMATKTAATMTPDDNFDNNISNDNNDCDDYSLLGQAQRLLETLNNINNVI----FTENDNSNNDNNYVDIVGFSFGGRVAMAAACLQQQEVQQLQQQPNNNNEGRHKIRIRKLHLTGVGCDRSDFGHLAMKSFHGIIHNDISLRSFAWSILLSTYSSKYLYNLSENKLERFIDHICSTNNPMGLLSILEQSEINDITDPWHVINMADRIVNANINSNNNSNNTINGKICVGEFD-KMAPINEVESLRKKLQWETPIDILSDCGHAAVMEKPRAWRESVISFLDDNE 420          
The following BLAST results are available for this feature:
BLAST of EWM22344.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102843|gb|EWM22344.1|0.000e+0100.00alpha beta hydrolase fold protein [Nannochloropsis... [more]
gi|553180490|ref|XP_005853412.1|1.587e-16499.57alpha beta hydrolase fold protein, partial [Nannoc... [more]
gi|1100134454|emb|SFF27052.1|2.292e-5146.032-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl... [more]
gi|551568739|ref|XP_005770325.1|2.570e-3337.69hypothetical protein EMIHUDRAFT_209930 [Emiliania ... [more]
gi|551597876|ref|XP_005781018.1|4.919e-3337.31hypothetical protein EMIHUDRAFT_204524 [Emiliania ... [more]
gi|223993211|ref|XP_002286289.1|5.110e-2729.71predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210523610|dbj|GAX17570.1|1.885e-2431.38hypothetical protein FisN_18Lh221 [Fistulifera sol... [more]
gi|1210523371|dbj|GAX18008.1|4.977e-2430.54hypothetical protein FisN_18Hh221 [Fistulifera sol... [more]
gi|1072862159|gb|OEU62836.1|8.630e-2230.94hypothetical protein BA867_03575 [Desulfobacterale... [more]
gi|1072232029|gb|OEU16761.1|8.351e-2124.20alpha/beta-hydrolase [Fragilariopsis cylindrus CCM... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8355rna8355Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications