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Properties
| Property Name | Value |
|---|
| Product | alpha beta hydrolase fold protein |
| Orig transcript id | gnl|cribi|Naga_100230g7.2215.mrna |
| Orig protein id | gnl|cribi|Naga_100230g7.2215 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:460310..461809 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8355 ID=rna8355|Name=rna8355|organism=Nannochloropsis gaditana|type=mRNA|length=1123bp
CTGCGACAGACCCTTTGGTACACCCGCCGTGGACACGTGAATGCCTGCGA
TCCTAAGTTTTGCCCTGACCTAACTTATTTGTCTCCTCGGTTCACAATGC
GGACAGGGAGGCCTCAGAGCAAGTGTCGCCCTTGCTGCTGGCTTGCTCCC
GGAAGACCTTGTCTGGCTCGTCTCTGCAGCCAGAAAGGACAGGCGAGATA
AAGGGCATTACCCGGAATTAAAGATGGCATCTGTGGTGCAAAAATACATG
AAGGCCTTGCGCGTGTACGGTTGGCGAGAAACGCTCTACAAGATGTACTC
GATGGGCGAAGTCAAGTTTGGGGATTTGAAAGGCGTCGACGTGAATGGGA
ACAAATATTTTGAAAACGTCGAGTACCCGTTTGGGCAACATCGCTGGGTG
GAATACAAGGATATCCACAACTACGAGCCATCCAGCATCCCGCCTGAGTG
GCACGGGTGGATCCATCACATGACAGACGAGGTGCCGGCTGGAAAGGCGG
GGGTGACAGAGCCGGGAATGAAGATTGCGGAGGGCCAACATACCCCCTAC
CAGGTGGCGGCGGGGCTGACGGACTACCAGATGGAAGGGCAATTGAACTG
GACGGCCCACCGCTCGCGTGGCTACGGCGTGGGCAGCTTGCATCAAAAGG
CGGGGGAGCCCGATAAGTTTTGGGTCCAGCCAGGGCACCCGCTGGCCGCA
AAGAAGCAAGAAAAGGGGAAAGGCGGAAGATTCGAGGGTTTGAAAGGTTA
CGAGGCGTGGAACCCCTCGGATCCGGAGGGGAAGAAGACAGCGCAGCCCA
TTCGCTCTCTGGACGAGAACTAGGGTGGAAAAAAAAACGGCGAAAACGGG
AAAAACGGGGCCGGTCTTCCTGAAGGGCAAGACCGTCAGGGATGGACCGA
TAAAAAAGGGTGTATGCACGGTATCGTGTGACAGGGCTGAGAATGGGTAC
GCCAATATGTGACAGATGTGTGTGTGAGTCTCGACCCATATGCGACGTGG
CATGATCGAAGGCAAAAGGAAAAAAATGAAGGATTGCTATGTTGTCGTGT
ACGCCATCTGATAGGCTTTTAGTCTTCCGGATGATTCCATGCCAAAGCCA
ATGCTACACTCTGATTGCATTCC back to topprotein sequence of rna8355 >rna8355-protein ID=rna8355-protein|Name=rna8355|organism=Nannochloropsis gaditana|type=polypeptide|length=353bp
MPRPHARLSAHSLFCLLTVVRAAGAFRLVSPWGRRYPHSTRPIATATPTF
VSASKARDFTIQIPDVSLPDEPLRHVRVLDTGLPSSNPGTASVPPPLVLI
GGTAQTIASWVGHIHGLSRKRRLIVYETRGQGRTTDLDLSDASLAVHVED
FCRVHAALKIEGPVDLCGFSFGGRVSLGVAALHPGLVRRLVLTGVPAERD
AVGRLIIKSWRAALDRGMLQEFVWNSMLHCHGAAFLSKYESKIPEWVAFV
ESANTVAGLRAMVARSHTSDVEDPYHTLQLAPRVEAPTLLLGALDDKVAT
ALEIKRLAEAGRRGWPVHFFPGAGHNCVFEAAVLWREEVLAFLDAEEGKG
GRV back to topmRNA from alignment at KK037248.1:460310..461809+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8355 ID=rna8355|Name=rna8355|organism=Nannochloropsis gaditana|type=mRNA|length=1500bp|location=Sequence derived from alignment at KK037248.1:460310..461809+ (Nannochloropsis gaditana)
AAAAATACTACGCTCAAATGCATTTTATCGATACGATTTCAAGCTTTCAT
TCCCACCGTGCCCACGCCCACAGCTTATGCCCCGTCCGCATGCCCGGCTT
TCTGCCCATTCCTTGTTTTGTTTGTTGACGGTAGTACGTGCGGCCGGGGC
TTTTCGCCTCGTCTCCCCTTGGGGCAGACGCTACCCTCACTCCACCCGCC
CCATCGCGACCGCTACTCCGACATTCGTTTCAGCTTCCAAGGCAAGGGAC
TTTACCATCCAAATCCCCGACGTGTCCCTGCCAGACGAACCGCTGCGACA
TGTGCGTGTCCTCGACaccggcctcccctcctccaatccgGGCACTGCCA
gcgttccccctcccttagTCCTCATCGGTGGTACCGCGCAGACCATCGCC
AGCTGGGTCGGTCATATCCACGGCTTGTCCCGGAAACGTCGGCTCATCGT
TTATGAAACGCGCGGCCAGGGACGCACCACCGATTTGGACCTGTCCGATG
CCTCGCTCGCCGTCCACGTTGAAGACTTTTGCCGTGTGCACGCAGCCCTG
AAGATTGAAGGCCCCGTCGACTTGTGTGGCTTCAGCTTCGGTGGGCGCGT
CAGTCTTGGCGTCGCGGCCCTCCACCCTGGATTGGTGCGACGTTTGGTGC
TGACGGGTGTGCCCGCTGAACGAGATGCAGTGGGACGGCTCATCATCAAG
TCCTGGCGTGCCGCTTTGGACCGCGGAATGCTGCAAGAATTCGTCTGGAA
TTCCATGCTCCATTGTCACGGGGCCGCGTTCTTGTCCAAATATGAATCGA
AGATCCCGGAGTGGGTGGCATTCGTGGAGTCGGCCAACACAGTGGCGGGT
TTGCGGGCCATGGTGGCCCGCAGCCATACCTccgacgtggaggacccgTA
CCACACCCTCCAGCTGGCTCCACGCGTCGAAGCGCCCACCTTGCTCCTGG
GGGCTTTGGACGACAAGGTGGCCACTGCTTTGGAAATCAAACGGCTGGCA
GAAGCCGGGCGCCGGGGTTGGCCGGTGCACTTCTTCCCCGGGGCCGGGCA
CAATTGTGTGTTCGAGGCGGCCGTCCTatggcgggaggaggtgctggcgt
tTTTGGAcgcagaagagggaaaaggtgggagggtctgagggagggaggga
cctggTGTGCAGGCTCTttgcgggggggaaagggtggtATGGTCATGCga
gaggacaggaggggaggggaagggagggttggcgggggggggaaggggag
gagggaggcaggaatgtTGTCTTAATGAGGGACAATGAGGTGTTCTTAGG
GAAGACGGGATGTGatgggccgaggaggggtacgtgggtgggatggagga
ggggaaagaggcgggcCCGGGGAGCACCGAGGGAGACCCCGGCACCAGGA
CCTGAAGGCCTGAAAGCTTGTACATAGGCTATTCGTGCACACACAGCCCA
ATCAGTGCATTTTGAAGTCATAAAGCAACGCAAGCAAAGCACAaacttgg
back to topCoding sequence (CDS) from alignment at KK037248.1:460310..461809+ >rna8355 ID=rna8355|Name=rna8355|organism=Nannochloropsis gaditana|type=CDS|length=1062bp|location=Sequence derived from alignment at KK037248.1:460310..461809+ (Nannochloropsis gaditana)
ATGCCCCGTCCGCATGCCCGGCTTTCTGCCCATTCCTTGTTTTGTTTGTT
GACGGTAGTACGTGCGGCCGGGGCTTTTCGCCTCGTCTCCCCTTGGGGCA
GACGCTACCCTCACTCCACCCGCCCCATCGCGACCGCTACTCCGACATTC
GTTTCAGCTTCCAAGGCAAGGGACTTTACCATCCAAATCCCCGACGTGTC
CCTGCCAGACGAACCGCTGCGACATGTGCGTGTCCTCGACaccggcctcc
cctcctccaatccgGGCACTGCCAgcgttccccctcccttagTCCTCATC
GGTGGTACCGCGCAGACCATCGCCAGCTGGGTCGGTCATATCCACGGCTT
GTCCCGGAAACGTCGGCTCATCGTTTATGAAACGCGCGGCCAGGGACGCA
CCACCGATTTGGACCTGTCCGATGCCTCGCTCGCCGTCCACGTTGAAGAC
TTTTGCCGTGTGCACGCAGCCCTGAAGATTGAAGGCCCCGTCGACTTGTG
TGGCTTCAGCTTCGGTGGGCGCGTCAGTCTTGGCGTCGCGGCCCTCCACC
CTGGATTGGTGCGACGTTTGGTGCTGACGGGTGTGCCCGCTGAACGAGAT
GCAGTGGGACGGCTCATCATCAAGTCCTGGCGTGCCGCTTTGGACCGCGG
AATGCTGCAAGAATTCGTCTGGAATTCCATGCTCCATTGTCACGGGGCCG
CGTTCTTGTCCAAATATGAATCGAAGATCCCGGAGTGGGTGGCATTCGTG
GAGTCGGCCAACACAGTGGCGGGTTTGCGGGCCATGGTGGCCCGCAGCCA
TACCTccgacgtggaggacccgTACCACACCCTCCAGCTGGCTCCACGCG
TCGAAGCGCCCACCTTGCTCCTGGGGGCTTTGGACGACAAGGTGGCCACT
GCTTTGGAAATCAAACGGCTGGCAGAAGCCGGGCGCCGGGGTTGGCCGGT
GCACTTCTTCCCCGGGGCCGGGCACAATTGTGTGTTCGAGGCGGCCGTCC
TatggcgggaggaggtgctggcgttTTTGGAcgcagaagagggaaaaggt
gggagggtctga back to top
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