EWM22385.1, cds8314 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|585102886|gb|EWM22385.1| (c-myb like protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 997.268 bits (2577), Expect = 0.000e+0 Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0 Query: 1 MEEQASLAQTSSSTSRTSSAVDVGPVAESHGTVLPYQSQSIVEEPNHARMPMDKQEVEVRGAGGHAEGESLAWPYAATGCDVFINAAHKESNLPSGARQNGKARVSPPWTYFPNSCALGLGDRKPGVCPPHGVPGHPGRESTTLPFIVSAPMASRAAEPLSPPVAPFTYTAASPRAEFECEGQEGPRALGNSSSALQCQANAKEDVDVDTDRGNGTLKSGKGGGKGEKGGRPGNGGHGTPPNPVGGRKRKVPTPWTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQERRASRVRAEQEKAKAGKGSEVSVCAVAGAIAREGRAQDGRKKRRGKQRRELELEDVIDRKTLSKAHDTLSTIYQAALDED 489 MEEQASLAQTSSSTSRTSSAVDVGPVAESHGTVLPYQSQSIVEEPNHARMPMDKQEVEVRGAGGHAEGESLAWPYAATGCDVFINAAHKESNLPSGARQNGKARVSPPWTYFPNSCALGLGDRKPGVCPPHGVPGHPGRESTTLPFIVSAPMASRAAEPLSPPVAPFTYTAASPRAEFECEGQEGPRALGNSSSALQCQANAKEDVDVDTDRGNGTLKSGKGGGKGEKGGRPGNGGHGTPPNPVGGRKRKVPTPWTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQERRASRVRAEQEKAKAGKGSEVSVCAVAGAIAREGRAQDGRKKRRGKQRRELELEDVIDRKTLSKAHDTLSTIYQAALDED Sbjct: 1 MEEQASLAQTSSSTSRTSSAVDVGPVAESHGTVLPYQSQSIVEEPNHARMPMDKQEVEVRGAGGHAEGESLAWPYAATGCDVFINAAHKESNLPSGARQNGKARVSPPWTYFPNSCALGLGDRKPGVCPPHGVPGHPGRESTTLPFIVSAPMASRAAEPLSPPVAPFTYTAASPRAEFECEGQEGPRALGNSSSALQCQANAKEDVDVDTDRGNGTLKSGKGGGKGEKGGRPGNGGHGTPPNPVGGRKRKVPTPWTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQERRASRVRAEQEKAKAGKGSEVSVCAVAGAIAREGRAQDGRKKRRGKQRRELELEDVIDRKTLSKAHDTLSTIYQAALDED 489
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|585100989|gb|EWM20993.1| (myb-related 3r-1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 161.384 bits (407), Expect = 4.567e-39 Identity = 74/146 (50.68%), Postives = 100/146 (68.49%), Query Frame = 0 Query: 255 WTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNK 400 WT +DA+LR+ + GP+ W +ISQE +G+ ++TQC RW + L+PG+ GPW EEDAV+ C++SG+T+WSEIA+RIPGRL K+ RERW L PS W+ EE+ L + +AR GN W +IA L PGRSEN VKN+ Sbjct: 133 WTDEQDAKLRKVVASRGPKNWKKISQEHFQGLYTDTQCLNRWYKVLRPGLVKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDPSVSKSA---WSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNR 275
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|585103684|gb|EWM22952.1| (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 155.606 bits (392), Expect = 1.855e-38 Identity = 74/156 (47.44%), Postives = 97/156 (62.18%), Query Frame = 0 Query: 255 WTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQER 410 WT ED +LR+G+ VG W IS +F+ RS QC RW++ L+PG+ GPWT+EED ++ C Q+G+T W EIA R+ GRL K+ R+RW L P+ H WT EE+ LA R GN W +IAKL PGR EN +KN+ Y + R QER Sbjct: 65 WTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKH---YWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQER 217
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|585103683|gb|EWM22951.1| (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 155.992 bits (393), Expect = 5.450e-38 Identity = 74/156 (47.44%), Postives = 97/156 (62.18%), Query Frame = 0 Query: 255 WTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQER 410 WT ED +LR+G+ VG W IS +F+ RS QC RW++ L+PG+ GPWT+EED ++ C Q+G+T W EIA R+ GRL K+ R+RW L P+ H WT EE+ LA R GN W +IAKL PGR EN +KN+ Y + R QER Sbjct: 165 WTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHY---WTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQER 317
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|585108315|gb|EWM26309.1| (transcriptional activator myb [Nannochloropsis gaditana]) HSP 1 Score: 158.303 bits (399), Expect = 6.599e-38 Identity = 80/171 (46.78%), Postives = 105/171 (61.40%), Query Frame = 0 Query: 245 GGRKRKVPTPWTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQERRASRV 415 GG KR W+ EDA LR + GP+ W +IS EF+ G RS+ QC RW++ L+PG+ GPWT EED ++ CVQ G +W+ IA IPGRL K+ RERW L P+ K WT EE+ LA +A+ GN W +IA+ PGRSEN VKN+ S R++E+ A R Sbjct: 161 GGGKR-----WSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKK---GEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKAAGRA 323
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|224001504|ref|XP_002290424.1| (MYB DNA binding protein/ transcription factor-like protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973846|gb|EED92176.1| MYB DNA binding protein/ transcription factor-like protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 142.124 bits (357), Expect = 8.509e-37 Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 0 Query: 255 WTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNK 400 W+ ED LR + +G + IS++ G R+E QC RW+++L+PG+ G W+ EEDA + CV+SG+T+WSEIAKR+PGR+ ++V+E W L P K G+ W+ E L + + +LGNRW EIAKL PGRSEN VKN+ Sbjct: 2 WSEQEDQYLRRAVHTLGENSFKMISEKVFHGTRTEVQCKNRWKKSLQPGLIKGKWSTEEDATIIKCVESGITKWSEIAKRLPGRIGEQVKEHWVNNLDPDVK-KGV--WSQTEMNTLINAQKQLGNRWSEIAKLIPGRSENSVKNR 144
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|545709430|ref|XP_005707025.1| (myb proto-oncogene protein [Galdieria sulphuraria] >gi|452823495|gb|EME30505.1| myb proto-oncogene protein [Galdieria sulphuraria]) HSP 1 Score: 154.066 bits (388), Expect = 1.367e-36 Identity = 74/158 (46.84%), Postives = 99/158 (62.66%), Query Frame = 0 Query: 255 WTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACV-QSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQERR 411 WT ED L+ + + G R W RIS+ F+ RS+ QC RW++ L P + GPWT +ED ++ V + G T+WS +AK +PGR+ K+ RERW L+PS PWTPEEE RL A LGNRW E+AKLFPGR++N +KN +LRK + R Sbjct: 181 WTLEEDEELKRLVSIYGARNWKRISEHFVN--RSDVQCLHRWQKVLNPALNKGPWTEKEDNIICEFVKEHGPTKWSHLAKLLPGRIGKQCRERWFNHLNPSLNKK---PWTPEEEERLIKAHAVLGNRWAELAKLFPGRNDNAIKNHWNSNLRKLKTR 333
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|298708729|emb|CBJ30691.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 147.517 bits (371), Expect = 3.513e-34 Identity = 74/157 (47.13%), Postives = 100/157 (63.69%), Query Frame = 0 Query: 255 WTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQ-SGM--TRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQ 408 WT ED RLRE ++ G R W R+ E + +RS+ QC RW + L+PG+ GPWT EED+++ CV+ SG +WS +A R+PGR+ K+ RERW L PS K W+PEE+ + +A +GNRW EIAKL PGR+EN VKN+ S RK+ Sbjct: 97 WTKEEDTRLREIVEHHGARNW-RMVAEQLGTLRSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKG---EWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKK 249
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|1137209990|gb|OMO78642.1| (hypothetical protein CCACVL1_14239 [Corchorus capsularis]) HSP 1 Score: 138.272 bits (347), Expect = 4.222e-33 Identity = 71/165 (43.03%), Postives = 94/165 (56.97%), Query Frame = 0 Query: 245 GGRKRKVPTPWTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQ-SGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQ 408 G +R WT ED L +Q + W +I++ R++ QC RW++ L P + GPW++EED ++ VQ G TRWSEIAK +PGR+ K+ RERW L+P K WT EEE L GNRW EIAKL PGR+EN +KN CS+RK+ Sbjct: 37 GPTRRSTKGGWTEEEDKMLTIAVQKFNGKSWKKIAECVPD--RTDVQCLHRWQKVLNPNLIKGPWSKEEDDLIFELVQKQGKTRWSEIAKYLPGRIGKQCRERWCNHLNPDIKKSA---WTEEEELMLIRAHGTYGNRWAEIAKLLPGRTENSIKNHWNCSVRKK 196
BLAST of EWM22385.1 vs. NCBI_GenBank
Match: gi|676387185|ref|XP_009036871.1| (hypothetical protein AURANDRAFT_7821, partial [Aureococcus anophagefferens] >gi|323452494|gb|EGB08368.1| hypothetical protein AURANDRAFT_7821, partial [Aureococcus anophagefferens]) HSP 1 Score: 132.109 bits (331), Expect = 7.051e-33 Identity = 70/157 (44.59%), Postives = 94/157 (59.87%), Query Frame = 0 Query: 255 WTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQ---SGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQ 408 WT ED RLRE ++ G + W R++ + VRS+ QC RW + L+PG+ GPWT +ED ++ V +G +WS IA ++PGR+ K+ RERW L P K WTPEE+ L + GNRW EIAKL PGR+EN VKN+ S RK+ Sbjct: 2 WTEEEDNRLREIVETFGAKNWKRLAM-LLGNVRSDVQCLHRWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKG---DWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154 HSP 2 Score: 58.9214 bits (141), Expect = 8.259e-7 Identity = 36/97 (37.11%), Postives = 49/97 (50.52%), Query Frame = 0 Query: 254 PWTPAEDARLREGI--QVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWT 348 PWT ED +++ + G +W I+ + R QC +RW L P +K G WT EED +L + RWSEIAK +PGR V+ RW Sbjct: 54 PWTADEDKIVKDMVLRHGAGNIKWSVIAAQL--PGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWN 148 The following BLAST results are available for this feature:
BLAST of EWM22385.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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