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Properties
| Property Name | Value |
|---|
| Product | c-myb like protein |
| Orig transcript id | gnl|cribi|Naga_100066g30.10342.mrna |
| Orig protein id | gnl|cribi|Naga_100066g30.10342 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:426673..428573 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8341 ID=rna8341|Name=rna8341|organism=Nannochloropsis gaditana|type=mRNA|length=1686bp
ATGACTACAGCCTACGCCGGAGCCGCCCTGCGGTGGGCTTTTCAAACGCT
AGATTTGCGAAATGAGGTGGTCGGTGTCATGGAAGAAATGCTGTCGACAA
TCGAGCATTGGAAGCTTGTCAATGACATGGAAAATATCCGCATGCAACTG
CAGCACGAGCGTGCAGAAGTCAGTCGTTTGCAAAAAGCAGTCCAGCAGCT
CGAAGCCTCAGAGGCCCAGCATACCGCGGACGCGCAAGCTCTACGGTCCA
CAGCGCGACGTGCACGGGATCAATTTGTTGGCAATCTGGTGCTCATCTCC
AAGCAACTATGTGCTACACAAGAGCAGGCAAAAGCTGAGGTGGCGGCTTC
AACGAGGGTGCGTGCCTTGGAACAAGAATTGCAACAATCGAAGCTTGCTT
TGCTGAGAGCGCAGCAAGGCCTCAAGCGGATAGGGGAAAACGATCAATCT
GCGGACATAGAAGCGGGCAAAGAAGAGCGTTTAAAAAATGAAAACGTTAA
TATCGGGGAAAGAGACATGGCGGGTCGGAAACCTCCGGGTACCACGCGCG
CCACCGTCTGCCCCCCCTTGACCTCTCCACAGCCCGTCTCCCCGCCTGCC
TCCGACTCCTGTATCTCGCTGACCGTCCTGGGCGAACCCTTGATCCTCCG
CATCTTCAGCTTCTTGAATGCACCCGACGTGTTGGCCGTGTCGGAGGTGT
GCCAGACGTGGCACTCTCGAATCGGCGCCATGTTCGGCGGCGAGGAACAC
GGGGCCCGGGAGGAGGAGGAGGAGGGGCAAGACGCATGGAGAAGCGCCGA
GAATGCGATGCCTCTGTCCGAAACAAGGAGAGAGATGTCTAGAGGAAGTG
AAAGTGGCCTCCCTCTGCCCGTGGCGCCCTCGTCTTCGTCCTCGTTCCTG
AAGAGCTACGGGCATCGGCTGTTGGGGGGCCAGGCGGCAGACGTTCTGTC
TTCCTCCCTTTCGTCCCTCCTGCCACCGCCGTCACGCGCTGCCGCTACTG
CACGTTCCCTGCTTGGGTCGTCCGATGGCGGCAGCGGTGCCAGCGCGGGA
GGAAGCAGCCGCGGACCGGTCCTCTCGGAACGGGTGGCCGCCTCCCTCTC
CAGCAAGTTGTCGAGTGCGGAGCTAAAGAGCATTTTGGCACTCACGGAGC
GTGTGAAAAAGATGGAGTCCTTGGTGGCCCAGTTTCAAGTAGAAAATCAG
GACGCTCGGGCACGGTTGGAAGGGGCAGATGTGGCGCATAGGCTAGTGCT
GGAAAAGCTCAAAGAGGCGGAGACGGAAGCCACATTGGCCCGTGAACGGG
AGCAAGCCGCGATACGACAGCGGGACTCCGACCAGGAAGTAATTGGTTTT
CTGGACGGGAGGGTGCAGGACCTGGAGAAAGGTTTGGAGAGGACGGTGGC
CAGGCTGGGGGCGGTCAATGAGGAGGCAACACGCGACAAAATGCAGCTGC
AAGATCAAGTGCGTGTTTTGCAAGACTTGCTCAACTTTGAACGACGTAAA
GCTGAAGAGGACAAGGCACAGTGGCGGGAGCACAAGAGGATACTGGCTAA
GGAAGTAAAGAGTCTACGAGGTGAGGTGGTGATGCGGCAAAAAGAGCGAG
ACGAGTATCGTGATGAGGCGCGGTACTTAAGGGTTGGTGGCGGGAGCTGG
GGTCGAAATGGGTTCAGTGGATTGAACAATAAATAA back to topprotein sequence of rna8341 >rna8341-protein ID=rna8341-protein|Name=rna8341|organism=Nannochloropsis gaditana|type=polypeptide|length=489bp
MEEQASLAQTSSSTSRTSSAVDVGPVAESHGTVLPYQSQSIVEEPNHARM
PMDKQEVEVRGAGGHAEGESLAWPYAATGCDVFINAAHKESNLPSGARQN
GKARVSPPWTYFPNSCALGLGDRKPGVCPPHGVPGHPGRESTTLPFIVSA
PMASRAAEPLSPPVAPFTYTAASPRAEFECEGQEGPRALGNSSSALQCQA
NAKEDVDVDTDRGNGTLKSGKGGGKGEKGGRPGNGGHGTPPNPVGGRKRK
VPTPWTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTL
KPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQ
LHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNK
AYCSLRKQERRASRVRAEQEKAKAGKGSEVSVCAVAGAIAREGRAQDGRK
KRRGKQRRELELEDVIDRKTLSKAHDTLSTIYQAALDED back to topmRNA from alignment at KK037248.1:426673..428573+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8341 ID=rna8341|Name=rna8341|organism=Nannochloropsis gaditana|type=mRNA|length=1901bp|location=Sequence derived from alignment at KK037248.1:426673..428573+ (Nannochloropsis gaditana)
GTCGGTAGTGTGCGTGAGGTCAGAAATACgggtcggaggaaggaaggagc
gggggggctCTCTGCTCGTCGTATCCTCAGGGCTAGGCAAGCTTGGACGC
CCGGAGGCTTGGGCCAAGGAATGTGCATGGCATCttgggagagggtgaga
cGAGGGAAATTATGCACCACACGCTGTATCTTTGGAacaggcgggggaag
ggggatgttGCGTCGCGTTACAAGTGTGTTTTACACATGTCGCTTTTAGC
AGGTCTTAGTATCCGCTACTCCTTGTCGAAAGGGCTCCAGTTGTAAATGC
CTTGGTTCTTCTTCCGACATCCAATCTCAGCGAGACACAGGAAGCAGCAA
GTGTGTGTCTCATTTTCTTATCCGTACCCGTTCAAGAAGAAAGCAGGTAC
GGGGCGCGAGTGCAGGGGGGAAGTTACCCCGCCATGGAGGAACAGGCCTC
ACTTGCGCAGACGAGCTCCTCAACAAGCAGGACAAGTAGCGCTGTGGACG
TTGGCCCCGTGGCAGAAAGTCATGGAACAGTCCTTCCTTACCAATCACAA
AGCATAGTGGAGGAGCCAAATCATGCGCGCATGCCGATGGATAAACAAGA
GGTAGAGGTGcgcggggctggcgggcaTGCTGAGGGAGAAAGCCTAGCGT
GGCCCTATGCCGCAACCGGGTGTGACGTCTTCATCAATGCCGCCCACAAG
GAATCCAACCTTCCATCAGGAGCACGACAGAatgggaaggcgagggtctc
cccgccttggacCTATTTTCCAAATTCGTGCGCTCTCGGCCTTGGAGATC
GGAAGCCTGGTGTGTGTCCGCCGCATGGAGTGCCTGGTCATCCGGGCCGC
GAATCCACCACGCTGCCTTTCATCGTGTCTGCCCCCATGGCAAGCAGGGC
AGCCGAACCCCTCTCCCCACCTGTGGCCCCGTTCACCTATACCGCTGCCT
CGCCTAGGGCAGAGTTTGAGTgcgaaggacaagaggggCCTCGCGCCCTG
GGAAACTCGTCTAGCGCGCTGCAGTGCCAGGCGAACGCCaaagaggacgt
ggacgtggACACAGACAGGGGGAATGGAACGCTTAAATCAGGGAAaggtg
gtgggaagggcgagaaaggcgggaggccgggaaatggagggcatGGGACC
CCTCCCAACCCcgtgggaggacgaaagcGCAAAGTCCCCACGCCCTGGAC
GCCGGCGGAAGACGCCCGCCTCCGGGAAGGCATCCAGGTCGTGGGTCCCC
GGCAATGGCTTCGCATCTCCCAGGAATTCATGCGCGGGGTGCGGAGCGAG
ACCCAGTGCTACCAGCGCTGGGAGCGGACCTTGAAACCGGGGGTGAAGAC
AGGGccctggacgagggaggaggacgccgtccTGACGGCATGCGTGCAGA
GCGGCATGACCCGGTGGTCGGAGATCGCCAAACGGATACCCGGACGGCTG
AGCAAGCGGGTTCGCGAGCGGTGGACCTGCCAGTTGCACCCGTCGCGGAA
ACACCACGGCCTGGTGCCTTGGaccccggaggaggaagctcgcCTGGCCT
CGGTGCGGGCGCGACTGGGGAATCGGTGGGTGGAGATTGCCAAGCTTTTC
CCGGGCCGGAGTGAGAACGACGTGAAGAACAAGGCCTATTGCTCTTTGCG
AAAGCAGGAGCGGCGCGCCAGTCGGGTCCGGGCAGAGCaagagaaggcga
aggcggggaaggggtcGGAGGTGTCCGTGTGTGCGGTAGCGGGGGCCATa
gcgcgggaagggagggcgcaaGACGgtcggaagaagaggagggggaagca
aaGGCGGGAACTGGAgttggaggacgtgatcgaCAGGAAGACGTTGTCCA
AGGCACACGACACTCTCTCCACCATCTACCAAGCCGCTCTGGACGAGGAT
G back to topCoding sequence (CDS) from alignment at KK037248.1:426673..428573+ >rna8341 ID=rna8341|Name=rna8341|organism=Nannochloropsis gaditana|type=CDS|length=1468bp|location=Sequence derived from alignment at KK037248.1:426673..428573+ (Nannochloropsis gaditana)
ATGGAGGAACAGGCCTCACTTGCGCAGACGAGCTCCTCAACAAGCAGGAC
AAGTAGCGCTGTGGACGTTGGCCCCGTGGCAGAAAGTCATGGAACAGTCC
TTCCTTACCAATCACAAAGCATAGTGGAGGAGCCAAATCATGCGCGCATG
CCGATGGATAAACAAGAGGTAGAGGTGcgcggggctggcgggcaTGCTGA
GGGAGAAAGCCTAGCGTGGCCCTATGCCGCAACCGGGTGTGACGTCTTCA
TCAATGCCGCCCACAAGGAATCCAACCTTCCATCAGGAGCACGACAGAat
gggaaggcgagggtctccccgccttggacCTATTTTCCAAATTCGTGCGC
TCTCGGCCTTGGAGATCGGAAGCCTGGTGTGTGTCCGCCGCATGGAGTGC
CTGGTCATCCGGGCCGCGAATCCACCACGCTGCCTTTCATCGTGTCTGCC
CCCATGGCAAGCAGGGCAGCCGAACCCCTCTCCCCACCTGTGGCCCCGTT
CACCTATACCGCTGCCTCGCCTAGGGCAGAGTTTGAGTgcgaaggacaag
aggggCCTCGCGCCCTGGGAAACTCGTCTAGCGCGCTGCAGTGCCAGGCG
AACGCCaaagaggacgtggacgtggACACAGACAGGGGGAATGGAACGCT
TAAATCAGGGAAaggtggtgggaagggcgagaaaggcgggaggccgggaa
atggagggcatGGGACCCCTCCCAACCCcgtgggaggacgaaagcGCAAA
GTCCCCACGCCCTGGACGCCGGCGGAAGACGCCCGCCTCCGGGAAGGCAT
CCAGGTCGTGGGTCCCCGGCAATGGCTTCGCATCTCCCAGGAATTCATGC
GCGGGGTGCGGAGCGAGACCCAGTGCTACCAGCGCTGGGAGCGGACCTTG
AAACCGGGGGTGAAGACAGGGccctggacgagggaggaggacgccgtccT
GACGGCATGCGTGCAGAGCGGCATGACCCGGTGGTCGGAGATCGCCAAAC
GGATACCCGGACGGCTGAGCAAGCGGGTTCGCGAGCGGTGGACCTGCCAG
TTGCACCCGTCGCGGAAACACCACGGCCTGGTGCCTTGGaccccggagga
ggaagctcgcCTGGCCTCGGTGCGGGCGCGACTGGGGAATCGGTGGGTGG
AGATTGCCAAGCTTTTCCCGGGCCGGAGTGAGAACGACGTGAAGAACAAG
GCCTATTGCTCTTTGCGAAAGCAGGAGCGGCGCGCCAGTCGGGTCCGGGC
AGAGCaagagaaggcgaaggcggggaaggggtcGGAGGTGTCCGTGTGTG
CGGTAGCGGGGGCCATagcgcgggaagggagggcgcaaGACGgtcggaag
aagaggagggggaagcaaaGGCGGGAACTGGAgttggaggacgtgatcga
CAGGAAGACGTTGTCCAAGGCACACGACACTCTCTCCACCATCTACCAAG
CCGCTCTGGACGAGGATG back to top
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