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Properties
| Property Name | Value |
|---|
| Product | atp synthase subunit 5 |
| Orig transcript id | gnl|cribi|Naga_100066g9.10331.mrna |
| Orig protein id | gnl|cribi|Naga_100066g9.10331 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:372949..374627 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8323 ID=rna8323|Name=rna8323|organism=Nannochloropsis gaditana|type=mRNA|length=1697bp
GCGCAGAGCTATGACAGCCCTCAGAGAAATTTTGCGAGAGCAGCTGGGGG
AGAGAAGCGTTGCCTGGCCGGGGAGGACCCCTATAAAGACTCAAATCGTG
CCTCTCTTCCTGGCTTTCAGGCGTTCAGGAACGAAAGTAAGAACAAGCGC
TACCCACTAACACACCAACGGGTGCCAAACAAATAAGTATGGGATGCGTA
AATGCCAAGGCGGCAGCAAACAGCAACGGCCTACCCCCTTCCAAAAACCT
CTCATTCGACAAAGACTACACACTGGGAAAAGAACTGGGCTCGGGAGCCT
ATGCCGTCGTGTACGAATGCACCAACAAGGCGACAGGACGGAAAGCGGCC
GTGAAGATCGTGGACCGCTCCAAGTTGAGCGGAGAGGACGACGAGGCATT
GAAGCAGGAGGTGGCAATCTTGCGGGACATGAAGCATGGGCACGTAGTCC
AGTTGTTTGACTTCTATAAGGATAGACAAAAGTATTACTTGGTGCTGGAA
ATCTGCTTGGGGGGGGAGCTGTTCGACCGTATCGTCGAGAAAAAAAGCTA
CAACGAAAAAGAAGCCCGAGACCTGGTACGCATCCTCTTCGACACCCTGC
GATATTGCCACTCCACCAAAGTTGTCCATCGGGACCTGAAGCCAGAGAAC
TTGTTGCTGGAGGACGAGCGGGACGACGCGAACATCAAGCTGGCTGATTT
CGGCTTTGCCCAACGCATGCTGACGCCCAATAGCCTCACGACCCAATGCG
GAACCCCTGGCTATGTGGCCCCAGAGATACTGAAAGGCATTCCGTACGGC
GAGAAGGTGGACGTTTGGAGCGCGGGCGTGATCACCTACATCCTCCTGGG
CGGCTACCCTCCCTTCTACGACGAGAACCAGGGCCGCATGTTCAGAAAAA
TCAAGCGCGGGGACTTCAAGTTCCATTCTCCCATGTGGGACCATGTGAGC
CCCGAGGCCAAGGATTTGATCAAGAGGCTTCTGGTCGTGGACCCCCACAA
GCGCCTGGACGCGGCAGGGGCCTTGAAGCACGCGTGGATCCTCACCAGCG
ACCACTTGCTGCAGAAACGCGATTTGGCTGGCACGGTGGAAGAGATGAAG
AAGTTCAACGCCAAACGGAAATTTCGCGGTGCTGCCAAGGCAGTGATTCT
CATGCACCGCTTGAAGGGAAGCTCTATGAGTGGTAAGCTCGACGACTCGA
CCGGGGACGGGGAGGGGATGGACGAGAGCGGGCCCCCCGTGGACTTCAAG
CCCGTCAGGGACAACATCTTGGCGACCAATGTTGTGGCCACTGCCTAAAG
GGGGGGAAGTGGGTCAGATTGTGAAGAAAAGGACTGAATTGTGTAGTTTT
GAGGAGGGTGAAATCACGAATTCTTCTGTGGGTAGTCTTCAAGTGCAAAA
AGGTTGTAAATTGTATATTGGCGCAACAGCCAGTGACAGGCCAGAATGCT
GCAAGGGCACACAAGTAGCAGGCCCTGTCTGGGGTCAGTTTATTCGTGAC
AATTTATGATTGGATGAGAAGTATCGGTGGAAGGAGAATATGTGAGGGAG
GTTGAGATAAAAGTGACGAGGATGTGCGGGTAGCCATACACTTCACACCG
AGAGCAAATTAGATTTTCGGTTATCAACACCGTCTGAGTGGCTTGACCTT
TTCAAAACCCATATCCACATTGCTGTTCTAAATTCAGAATACACTCT back to topprotein sequence of rna8323 >rna8323-protein ID=rna8323-protein|Name=rna8323|organism=Nannochloropsis gaditana|type=polypeptide|length=211bp
MGRRRRSSSASRSNSLLSIAPPMRLSGPVGKITSNLYSYASMNGVLDAVE
KDFHLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLP
YFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGL
IIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATKDT
WAKAYQEAMAL back to topmRNA from alignment at KK037248.1:372949..374627+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8323 ID=rna8323|Name=rna8323|organism=Nannochloropsis gaditana|type=mRNA|length=1679bp|location=Sequence derived from alignment at KK037248.1:372949..374627+ (Nannochloropsis gaditana)
CTTGCGCGCTTGCGTTCGTTGTCCCTTGGGTACGAAGGCGATGCTGTTGT
AATGAACGTCGATACCCCggtggagggatgggcgaAGTTTGtgaaagcga
ggagaggtCATATGcagcaggaagagagagcCAACCCGCCCTCTCCGATT
CGAGATGAACCCTTCTAAAGCTGTGTGTCACTCATGCTCATGCATTTCCC
TACAATGCCCATCTATAATGCGCGAATAGAGAAGAGATGGCCGCTACTCT
CCGAATGGCTGCCTCGCGTGCTGCTCGGCAAGCCATTATCCGAGTCGCGg
cttcccctgcctctgtCAGCCCTGTGCGGTGCTTGGCGTCAGGCGGAGGG
GAATATAACCCTTTCACACACTCCTTGGACCGGTTAAACacgaagaaggt
gaggatcCTATGATGCGGTGGGTCTGTGATGCATAGGTTTCTTTTTTCCG
AGGCACATGGGAGATGAACGGGCGGGAGTTGAGTGAGAGTCTTCGATTTG
GCCGTGTGTGTGCGTATGTCTAGCTTTTTAGTGGGAGATCATTGACCCTC
GCGCCATAGTCGGACTGGTTTTGATTGTTTTTTGGTATCTAATCAGATGC
TCGGAAAAGTAGCCTGTTCTTCCTCTAAGCACTCACACATTTCCTTACGC
CAaggtcctgctcctctgtgCACTTGTTACAAGTCAATAGAAGTCAAAAG
CAAGCACGTTGTGAGCTTTTAAGCCCTTCAGCGCTTCATAGTTAAAGAAT
GATTTTTGGGTAGCAAGACTTAATATTTCTCGGGTCCCTGTCCCGTTTTC
TCCGTCCCActtgctctccctcgctctgtTCTCCCCTAGGTGGCCCAAAC
TCTAGACTTGGGCGATGGGAAGACGCAGAAGATCTTCGAGCGCATCAAGG
TCGAATTCCCTCCTGAGCATTGCCCCCCCCATGAGGCTCTCCGGCCCTGT
AGGCAAGATCACTAGCAATCTGTACTCGTACGCCTCCATGAACGGCGTct
tggacgcggtggagaaAGACTTCCACCTGGTCGAGAAGGATTTGATCGGC
ACGAAGGAATGGCTCAACAGCAACGGCTGGACTACGACGCAGAAGCTAGA
GATGGTGAACAAGTTCATGAGCAAGGCGGGGAGCCTGACCCCGTTCACAA
AGGAGCTTTTGCCCTACTTCGTGGAACAGAAGATGCTCAAGCACTTGCCC
GAGATCAAAGACCTGTTTTTCAAGCTGGTCAAGGAGAAGCGCGGCGAGAT
CGACGTGTTCGTTACCAGCGCCGACCCCCTTGATGCGGCAACGCTCAAGC
AGCTAGAGGGCCTTATCATCAAGCAGATCGGATCGTCGGCGGCTAGCAAA
GTGAACTTCCACACGGACGTAGACAAGGACCTGGTGGCGGGGCTACGCAT
CCGGTATAAGAGCACCTTGATCGACAACACCGTCACCCGCAAGGTGTCTG
CGACCAAGGACACGTGGGCAAAGGCCTATCAGGAGGCCATGGCGTTGTAA
GGAGGAAGCTTTTAGAGgttcgagggggaaggtggggtgGGGACTTCGAC
TGAATCGTGCGGGTGGAAGTGGGGCCTCGCGCGGCCCCGTGCAGGACGTA
AGGCACTGGAAAGGTTAAGGTGGCAGGGTAGAAAAGTGAACGACGCGAAA
GAAGAATTTGTGAAGAAAACTGCCCCGAA back to topCoding sequence (CDS) from alignment at KK037248.1:372949..374627+ >rna8323 ID=rna8323|Name=rna8323|organism=Nannochloropsis gaditana|type=CDS|length=636bp|location=Sequence derived from alignment at KK037248.1:372949..374627+ (Nannochloropsis gaditana)
ATGGGAAGACGCAGAAGATCTTCGAGCGCATCAAGGTCGAATTCCCTCCT
GAGCATTGCCCCCCCCATGAGGCTCTCCGGCCCTGTAGGCAAGATCACTA
GCAATCTGTACTCGTACGCCTCCATGAACGGCGTcttggacgcggtggag
aaAGACTTCCACCTGGTCGAGAAGGATTTGATCGGCACGAAGGAATGGCT
CAACAGCAACGGCTGGACTACGACGCAGAAGCTAGAGATGGTGAACAAGT
TCATGAGCAAGGCGGGGAGCCTGACCCCGTTCACAAAGGAGCTTTTGCCC
TACTTCGTGGAACAGAAGATGCTCAAGCACTTGCCCGAGATCAAAGACCT
GTTTTTCAAGCTGGTCAAGGAGAAGCGCGGCGAGATCGACGTGTTCGTTA
CCAGCGCCGACCCCCTTGATGCGGCAACGCTCAAGCAGCTAGAGGGCCTT
ATCATCAAGCAGATCGGATCGTCGGCGGCTAGCAAAGTGAACTTCCACAC
GGACGTAGACAAGGACCTGGTGGCGGGGCTACGCATCCGGTATAAGAGCA
CCTTGATCGACAACACCGTCACCCGCAAGGTGTCTGCGACCAAGGACACG
TGGGCAAAGGCCTATCAGGAGGCCATGGCGTTGTAA back to top
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