EWM22374.1, cds8296 (CDS) Nannochloropsis gaditana

Overview
NameEWM22374.1
Unique Namecds8296
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:373813..374448 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22374.1
Productatp synthase subunit 5
Orig transcript idgnl|cribi|Naga_100066g9.10331.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:373813..374448 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005215transporter activity
GO:0016740transferase activity
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0015986ATP synthesis coupled proton transport
Vocabulary: INTERPRO
TermDefinition
IPR026015ATPase_OSCP/delta_N
IPR000711ATPase_OSCP/dsu
Homology
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|585102875|gb|EWM22374.1| (atp synthase subunit 5 [Nannochloropsis gaditana])

HSP 1 Score: 432.95 bits (1112), Expect = 1.657e-153
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query:    1 MGRRRRSSSASRSNSLLSIAPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFHLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATKDTWAKAYQEAMAL 211
            MGRRRRSSSASRSNSLLSIAPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFHLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATKDTWAKAYQEAMAL
Sbjct:    1 MGRRRRSSSASRSNSLLSIAPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFHLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATKDTWAKAYQEAMAL 211          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|553187180|ref|XP_005854560.1| (F-type H+-transporting ATPase oligomycin sensitivity conferral protein [Nannochloropsis gaditana CCMP526] >gi|422294507|gb|EKU21807.1| F-type H+-transporting ATPase oligomycin sensitivity conferral protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 395.971 bits (1016), Expect = 5.267e-138
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0
Query:   20 APPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFHLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATKDTWAKAYQEAMAL 211
             PPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFHLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATKDTWAKAYQEAMAL
Sbjct:   82 CPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFHLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATKDTWAKAYQEAMAL 273          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|298706078|emb|CBJ29188.1| (ATP synthase O subunit, mitochondrial precursor [Ectocarpus siliculosus])

HSP 1 Score: 79.337 bits (194), Expect = 3.822e-14
Identity = 52/181 (28.73%), Postives = 91/181 (50.28%), Query Frame = 0
Query:   21 PPMRLSGPVGKITSNLYSYASMNGVLDAVEKD---FHLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATK 198
            PP++L G   +  +  YS AS  G L+ V++D   F  + ++    K +L +   + + K+EMV+K        +  TK LL        L    ++ D + +++K K+GEID  VT+A+PL     K L   +  QIG  A   +   T+V+  LV GL ++     +D +++ K+++ K
Sbjct:  122 PPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIG--ANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMK 300          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|924822701|gb|KOS20651.1| (ATP synthase subunit 5 [Escovopsis weberi])

HSP 1 Score: 74.3294 bits (181), Expect = 8.767e-13
Identity = 52/180 (28.89%), Postives = 88/180 (48.89%), Query Frame = 0
Query:   21 PPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFH----LVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFT-KELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVS 195
            PP+ L G  G   + LY+ A+    LDA  KD      +V KD       L++   +   K  +V + +  +G+ +  T +  L    E   L  LP + D F +L+   RGE+++ VTSA PLDA TL +LE  + K        K+  +  V+++++ GL +      +D +V+ +V+
Sbjct:   34 PPVALFGLDGTYATALYTAATKQATLDATAKDLAKLGAIVHKD-PKLSTILSAPTLSHADKSAIVAELVKASGAASGSTLQNFLSTLAENNRLGLLPGVTDKFGQLIAAARGEVEMTVTSAQPLDAKTLARLETAVAKSSHVGQGKKLKVNNIVNREIIGGLIVEVGDRTVDLSVSARVA 212          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|1003738592|gb|KXX75198.1| (ATP synthase subunit 5, mitochondrial [Madurella mycetomatis] >gi|1003742205|gb|KXX78067.1| ATP synthase subunit 5, mitochondrial [Madurella mycetomatis])

HSP 1 Score: 74.3294 bits (181), Expect = 1.107e-12
Identity = 56/181 (30.94%), Postives = 83/181 (45.86%), Query Frame = 0
Query:   19 IAPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDF----HLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVS 195
            + PP+ L G  G   + LY+ A     L+   K      +L++KD   T   L +   T   K  +V +    AG+     K  L    E   L  LP + D F +L+   RGE+++ VTSA PLD  TL +LE  I K     A  K+     V+ D+V GL +      ID +V+ K++
Sbjct:   36 VKPPVALFGLDGTYATALYTAAVKTSSLEPTAKGVAALGNLLQKDAKLTT-ILEAPTLTAADKSAIVAELQKNAGATGETVKNFLSTLAENNRLGLLPGVCDKFAELMSAARGEVEMIVTSAQPLDNKTLNRLETAISKSSYIGAGQKLKVKNTVNPDIVGGLVVEVGDRTIDLSVSSKLA 215          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|389638418|ref|XP_003716842.1| (ATP synthase subunit 5 [Magnaporthe oryzae 70-15] >gi|351642661|gb|EHA50523.1| ATP synthase subunit 5 [Magnaporthe oryzae 70-15] >gi|440474672|gb|ELQ43402.1| ATP synthase subunit 5 [Magnaporthe oryzae Y34] >gi|440480461|gb|ELQ61121.1| ATP synthase subunit 5 [Magnaporthe oryzae P131])

HSP 1 Score: 73.9442 bits (180), Expect = 1.612e-12
Identity = 55/182 (30.22%), Postives = 85/182 (46.70%), Query Frame = 0
Query:   18 SIAPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDF----HLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVS 195
            ++ PP+ L G  G   + LY+ A     L+   +       LV+KD       L +   T + K  +V +    +GS +   K LL    E   L  LPE+   F +L+   RGE+++ VTSA PLD  TL +LE  + K     A  K+     V+ D+V GL +      ID +V+ K++
Sbjct:   38 NVKPPVTLFGIDGTYATALYTAAVKTQSLEPTARGLSQLEQLVKKD-PKLATILGAPTLTASDKSAIVAELEKSSGSSSAAVKNLLEVLAENNRLGLLPEVCSKFGELMSAARGEVEMTVTSAQPLDNRTLSRLETAVAKSSYVGAGKKLKVTNQVNPDIVGGLVVEVGDRTIDLSVSSKLA 218          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|910749427|ref|NP_001298200.1| (ATP synthase subunit O, mitochondrial-like [Biomphalaria glabrata] >gi|388815827|gb|AFK78217.1| ATP synthase-like protein [Biomphalaria glabrata])

HSP 1 Score: 72.0182 bits (175), Expect = 6.030e-12
Identity = 59/203 (29.06%), Postives = 93/203 (45.81%), Query Frame = 0
Query:    4 RRRSSSASRSNSLLSIAPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFHLVEKDLIGTK---EWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQ----LEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSATKD 199
            R   SSA+R   L  +  P+++SG  G+  S LYS A+    L+ VEK+   ++ +L   +   E+L+       QK   V   M K  + +  T  L     E   +K   ++   F KL+   RGE+   V +A PLD ATLK+    L+G + K  G S    +   T VD  L+ G+ +      +D ++  K+    D
Sbjct:   11 RHFCSSAARGGKL--VQAPLQVSGVEGRYASALYSAATKQSKLETVEKELSSLQSELQKNQQLLEFLSDPSQKKFQKKAAVESLMKKK-NFSDLTVNLFVALAENGRMKKTMQVISSFNKLMSAHRGEVSCTVKTAKPLDEATLKELKTALQGFLKK--GES----LQLQTSVDPTLIGGMTVALGDKFVDMSMRTKIKTYTD 204          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|302923498|ref|XP_003053689.1| (hypothetical protein NECHADRAFT_102383 [Nectria haematococca mpVI 77-13-4] >gi|256734630|gb|EEU47976.1| hypothetical protein NECHADRAFT_102383 [Nectria haematococca mpVI 77-13-4])

HSP 1 Score: 72.0182 bits (175), Expect = 6.923e-12
Identity = 57/183 (31.15%), Postives = 83/183 (45.36%), Query Frame = 0
Query:   19 IAPPMRLSGPVGKITSNLYSYASMNGVLD----AVEKDFHLVEKDLIGTK--EWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVS 195
            + PP+ + G  G   + LY+ A     LD    A+     L EKD   TK    L +   T   K  ++ +   KAGS     K  L    E   L  LP + D F  ++   RGE++V VTSA PLD  TL +LE  + K    S   K+     V+ D+V GL +      ID +V+ +++
Sbjct:   38 VKPPVSVFGVDGTYATALYTAAVKTSSLDPTATALSNLGALFEKD---TKLAAILLTPTLTEADKKAIIEELGKKAGSGNETVKNFLETLAENNRLGLLPGVCDKFATIISAARGEVEVTVTSAQPLDKRTLNRLESAVSKSAYISQGQKLKVTNSVNPDIVGGLVVEIGDRTIDLSVSARIA 217          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|1063251258|gb|ODQ73704.1| (hypothetical protein LIPSTDRAFT_52074 [Lipomyces starkeyi NRRL Y-11557])

HSP 1 Score: 71.2478 bits (173), Expect = 9.212e-12
Identity = 56/182 (30.77%), Postives = 89/182 (48.90%), Query Frame = 0
Query:   18 SIAPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDFH----LVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVS 195
            S APP++L G  G   S LY+ A+ N  LDA  K       L++KD       + SN   +    ++V + +SK+ S+ P    LL    E   L  L E+ + F  L+   +GE++  +TSA PLD+  L ++E  I K     A  K+     V+ D++ GL +      +D +V+ K+S
Sbjct:    9 STAPPVQLFGVDGTYASALYTAAAKNSSLDATSKALTYLKTLLDKD--PDVSGILSNPALSASDKKIVVETLSKSVSV-PTVANLLAVLAENNRLGLLSEVIEKFDTLMSAYKGEVEATITSAAPLDSKILSRIESAISKSQFVGAGKKLKVSNRVNPDILGGLIVEVGDRTVDLSVSSKIS 187          
BLAST of EWM22374.1 vs. NCBI_GenBank
Match: gi|1192745175|ref|XP_021002848.1| (ATP synthase subunit O, mitochondrial [Parasteatoda tepidariorum])

HSP 1 Score: 71.2478 bits (173), Expect = 1.078e-11
Identity = 59/197 (29.95%), Postives = 95/197 (48.22%), Query Frame = 0
Query:    4 RRRSSSASRSNSLLSIAPPMRLSGPVGKITSNLYSYASMNGVLDAVEKDF----HLVEKDLIGTKEWLNSNGWTTTQKLEMVNKFMSKAGSLTPFTKELLPYFVEQKMLKHLPEIKDLFFKLVKEKRGEIDVFVTSADPLDAATLKQLEGLIIKQIGSSAASKVNFHTDVDKDLVAGLRIRYKSTLIDNTVTRKVSA 196
            R+  SS S   ++  I PP+ + G  G+  +  YS A     +DAVEKD     +LV+KD     E++ +       K +++ K  +K  + +P T  LL    E   LK L  + D F  ++   RGEI   + SA PLDA TL + E  +   +  +   KV  +T VD  L+ G+ +      +D +++ K+ A
Sbjct:   12 RKFGSSPSLCAAM--IKPPVAVFGVAGRYVTAFYSAAMKEKKIDAVEKDLIDLKNLVQKDK-RFAEFIVNPLMKPKIKTDILRKVCTKK-NYSPLTGNLLALLSENGRLKSLMAVLDCFSGVMSNIRGEISCEIVSAKPLDAPTLSEFEKALKAFVKKN--EKVLLNTRVDPSLIGGVIVTIGDKYVDMSISSKIKA 202          
The following BLAST results are available for this feature:
BLAST of EWM22374.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102875|gb|EWM22374.1|1.657e-153100.00atp synthase subunit 5 [Nannochloropsis gaditana][more]
gi|553187180|ref|XP_005854560.1|5.267e-13899.48F-type H+-transporting ATPase oligomycin sensitivi... [more]
gi|298706078|emb|CBJ29188.1|3.822e-1428.73ATP synthase O subunit, mitochondrial precursor [E... [more]
gi|924822701|gb|KOS20651.1|8.767e-1328.89ATP synthase subunit 5 [Escovopsis weberi][more]
gi|1003738592|gb|KXX75198.1|1.107e-1230.94ATP synthase subunit 5, mitochondrial [Madurella m... [more]
gi|389638418|ref|XP_003716842.1|1.612e-1230.22ATP synthase subunit 5 [Magnaporthe oryzae 70-15] ... [more]
gi|910749427|ref|NP_001298200.1|6.030e-1229.06ATP synthase subunit O, mitochondrial-like [Biomph... [more]
gi|302923498|ref|XP_003053689.1|6.923e-1231.15hypothetical protein NECHADRAFT_102383 [Nectria ha... [more]
gi|1063251258|gb|ODQ73704.1|9.212e-1230.77hypothetical protein LIPSTDRAFT_52074 [Lipomyces s... [more]
gi|1192745175|ref|XP_021002848.1|1.078e-1129.95ATP synthase subunit O, mitochondrial [Parasteatod... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8323rna8323Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications