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Properties
| Property Name | Value |
|---|
| Product | 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase |
| Orig transcript id | gnl|cribi|Naga_100067g6.2687.mrna |
| Orig protein id | gnl|cribi|Naga_100067g6.2687 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:285926..287690 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8289 ID=rna8289|Name=rna8289|organism=Nannochloropsis gaditana|type=mRNA|length=1666bp
CAGAAGACAATGACGCTGTACGCGCAGAGGGAAAGGGTCGGGTTGAAAGC
ACCCTTCAATGTTTTCATATTGTGGGCTCTGGGGTTCATTTTTGTTCGAA
ATACCTGTCGCACGCAAACTTTCCACTTTCTTCGGGCTGACGAGCACCAC
CCCCCTCCCCTGGGTTGCTATCTCACCTTTTCAAAATTCCTTCGTACAAA
TACACTTCAGCGCCCGCTGCCGGCGGTAAGCAGCACCACGCCCTGTACGG
CAATAGCGCGGCAACATCGATCATGAAGCACTCCCCATCCACTTTGTTGC
TCTTCCTTTGTGTCGCCACTTTTTCAGGCCCCGGGAGCGTGGAAGTGGGA
GCCTTCTATCTGACCCCCCGAGTCTCGACGGGGGCGGACATTACATCCCC
CGTCATCGTCCGGGCCATGCGGTTGCAAAATTTTGGGACATATAGAAAGT
CTGCCAGGGTCCTGTCATGGGTGTTTCCCCAATTTCTTCGGCAAATCATG
TTTAGAGGAGCCCGTCATGGCAGCAGTACCAGCCGAAGTAGCAGGAGCAG
GAGCCGTACGTCAGGCACCAATGACGCGGGGCCTGCCCCTCGCACAGGCA
GACTGGCGGCTACTGCGCTCTCCTACCAGGTAGGTCCTTCGTTTTTGCAA
AGGATGAGTGCTGTGTCATACAATGGGGTTGAAGGAGAGGGCGGTCGGCC
GTCGCAGCAATCAGTGCAGCAGCCGCAGCCTCAGTCGGCGCAACAAAATG
TTAGACCGGCGCTGAACGGAGAGGGCGGTCTTGCAGGAGCACAAGAGAAC
TCGGACGTAATTCCTATTTTGATCAAGTACACCGGTGGGGTGGGATATAA
AAGTCTTTACACGGGTGTGTGTCGAGTCCTGAAGGAGCGGTTCGGGAACA
TTGCTATTCGAAAGACCATATTGGGCGTCACCGAAGTCCGAGGGGGGAAG
AAACTAGGAATATTTGAGGTTGTGATAGGGGATCGCTCTTTTACGTCGAA
ACCAGGGGCCGTGGGTGTATATCTCCCCATGGCTGACCTACAAGCTGCCA
TTGAGAGGGTTGTTGTCCGGCGAGAGAAGGAGAATAAGATGCTAGCAGCT
GCGGCGGCCGCTGTATCGGCCGTGGCGAGCGATGGCAGTGACGGGATATC
CTACCAAGAGTCTATCCATCCATGACGGTGGTCTGTGAGGAAAGACTGCC
CCATGTTGGTCGGGGTCCTGGGGGGAGATGCAGGGGGCGCGGAAGGGGAA
ATCCACGAGCGGAAACTCCTATATAAGGTGTCGAGAAAAGGTGCACGTGC
TGTTTGGGTGGAGGGCATCTCTAACGTGTCGGCGATTAGTCTTTTACCCG
TCTCTGTGACGTGCTATTCTCCGAAGATTCTCCGCGTTCCCTATTTGTAT
GTACAAAACCAAGTATATACTCGTATATACGCATATACATAAATATATGA
AACCGCACCCTTCCTCCTCATTGGTCCCTGCTTCATCGACGATGCAGCTG
TATGGAGGGAGGCGGGATCCAGGCAAGAGCAAGGAAAGAGTACCACCGTT
GTTAGCTTGTGAGGTTCACGACGGAAAAGGCTGGCGAGTGCAAACTGTAC
TGTCCCCGAAAGGAAACAATCGGCGATGATTTGTAAACAACGACAGCTTA
TCAAGCTTGACTCTGC back to topprotein sequence of rna8289 >rna8289-protein ID=rna8289-protein|Name=rna8289|organism=Nannochloropsis gaditana|type=polypeptide|length=310bp
MTTVHGSSYRFIWFGLEMVSLFIHFTCLLPLLIGTPVTRAFMPRLNGATF
LGPSNALSPVNVAHSRNRGIFCMRSNEMITVEGVSVVLLAGGVGKRMKAD
RPKQFIELLGKPVLLHSLEIFSTLPGVNRIVIVLDKSYRQEFSFLQEEDP
RIVFADPGKERQDSVFNGFSQTLPDASVVCIHDSARPLVSQSAVLASLRD
GSVHGAAVLGVPMKATVKESADGEFVLRTMNRSRLWEIQTPQVIKPDILS
EAFALVTEKGLEVTDDVSMVEQVGRPVKLTMGEYTNIKLTTPEDIGVAEG
FLRERAEGKL back to topmRNA from alignment at KK037248.1:285926..287690- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8289 ID=rna8289|Name=rna8289|organism=Nannochloropsis gaditana|type=mRNA|length=1765bp|location=Sequence derived from alignment at KK037248.1:285926..287690- (Nannochloropsis gaditana)
AAACCCGCCGCCCGGCCTAGGCCTGTCACCCACCGTCCTGAACGACCTAT
ACCAACACCCCGGGACGAGGTTCCTTGCATATGACTACCGTACATGGCTC
TTCTTACAGGTTTATTTGGTTTGGACTGGAGATGGTAAGCCTCTTCATAC
ATTTTACGTGCCTGCTCCCACTCCTCATCGGCACGCCCGTGACGAGGGCG
TTCATGCCGCGTCTCAATGGAGCCACTTTCTTGGGGCCGTCAAATGCGCT
GTCACCAGTAAATGTGGCACACAGTAGAAATCGAGGCATTTTTTGCATGA
GGAGCAATGAAATGGTAAGTTTTTTTTTCTACACTGTAGCCCCTCGATGT
GTATCGCTCTGAACATGCTTACCCCTCGCGGCTTGCAGACAGCTCCAAAA
CGCCTTAACAAAATAAATGTTCCGGTAATGTAATCATGCGGCTACTTACA
AATCATTTTGATGACTACATTCTCATCAAAAGATAACTGTGGAAGGCGTG
TCTGTGGTGCTCCTTGCGGGCGGAGTGGGAAAGCGGATGAAGGCCGATCG
ACCAAAGCAATTTATAGAGCTTCTAGGAAAACCAGTTCTTTTGCATTCCC
TTGAAATCTTTAGTACCTTGCCCGGCGTCAATCGGTACGTACTTGAGAGA
GAGATGTGTAAAGAATAAGTCCTGATAGTCGGCAATCGCCTCGGCGCCGA
CTTGGATGCGAGCCTCCTCCAGACGTAGGTCCTGCGAGGGCGCAATAGCA
TCACAATGTACGAGGAAGCTTCAGCAAGACAAAGGAGGAGAAATGTCTTA
TGTGTACGCTTTCACAACCTTTACCTCATCAGGATCGTCATTGTACTTGA
CAAGAGCTACCGCCAAGAATTCTCGTTTCTCCAAGAAGAGGACCCTCGTA
TCGTCTTTGCCGACCCTGGGAAGTACGTATAAATGGATCGATTTTTGAAT
TTGGGAGCTCTCAAGTAAATGCGAGCATTCTCTTCTCGGGGTGTTTATGT
TCAGCATGGAAATGCCAGTCGTCCTTCTCCCGCTCTAGTATCCTTGCTCG
GAATGGCCAGACACAAACGATGTCACCCCTTAGGATTTCAACATACATGT
TTTTTAATACAGAGAACGACAAGATTCGGTCTTTAACGGCTTTAGTCAGA
CTCTTCCTGACGCTTCAGTAGTCTGCATCCATGATTCCGCCCGTCCTCTC
GTATCCCAATCCGCTGTTTTGGCATCCCTTCGGGATGGTTCGGTGCACGG
TGCAGCGGTCCTCGGTGTACCAATGAAAGCAACTGTTAAGGAATCTGCAG
ATGGAGAATTTGTGTTGAGGACTATGAATCGCTCACGTCTCTGGGAAATT
CAGACTCCCCAGGTGATCAAGCCTGACATCCTGTCTGAAGCCTTTGCGCT
GGTAACAGAGAAGGGCTTGGAAGTCACGGACGACGTGTCCATGGTCGAAC
AGGTGGGCAGGCCTGTGAAGCTAACGATGGGGGAATATACAAACATAAAG
CTGACGACGCCAGAGGATATTGGTGTCGCTGAGGGGTTCTTGAGAGAGCG
AGCTGAGGGTAAACTGTAGCTCGTCGGATCTACCTTTAAAAGGTATGAAC
TCGCCGAGTTGTGCGTGCCGTAGTTTAAGAAAAATACAACAACATGTTCG
TAGTTGGTTGAACAAGGTCGGAAATTGCCTGCACAAACCTTGTGTCTTGA
ATGCAAACAGGAAAAACCTATGGCATATGTGTTACGAGACAGAAAAGGAT
GTACGCATTCATCCG back to topCoding sequence (CDS) from alignment at KK037248.1:285926..287690- >rna8289 ID=rna8289|Name=rna8289|organism=Nannochloropsis gaditana|type=CDS|length=3732bp|location=Sequence derived from alignment at KK037248.1:285926..287690- (Nannochloropsis gaditana)
AGAACGACAAGATTCGGTCTTTAACGGCTTTAGTCAGACTCTTCCTGACG
CTTCAGTAGTCTGCATCCATGATTCCGCCCGTCCTCTCGTATCCCAATCC
GCTGTTTTGGCATCCCTTCGGGATGGTTCGGTGCACGGTGCAGCGGTCCT
CGGTGTACCAATGAAAGCAACTGTTAAGGAATCTGCAGATGGAGAATTTG
TGTTGAGGACTATGAATCGCTCACGTCTCTGGGAAATTCAGACTCCCCAG
GTGATCAAGCCTGACATCCTGTCTGAAGCCTTTGCGCTGGTAACAGAGAA
GGGCTTGGAAGTCACGGACGACGTGTCCATGGTCGAACAGGTGGGCAGGC
CTGTGAAGCTAACGATGGGGGAATATACAAACATAAAGCTGACGACGCCA
GAGGATATTGGTGTCGCTGAGGGGTTCTTGAGAGAGCGAGCTGAGGGTAA
ACTGTAGGATCGTCATTGTACTTGACAAGAGCTACCGCCAAGAATTCTCG
TTTCTCCAAGAAGAGGACCCTCGTATCGTCTTTGCCGACCCTGGGAAATA
ACTGTGGAAGGCGTGTCTGTGGTGCTCCTTGCGGGCGGAGTGGGAAAGCG
GATGAAGGCCGATCGACCAAAGCAATTTATAGAGCTTCTAGGAAAACCAG
TTCTTTTGCATTCCCTTGAAATCTTTAGTACCTTGCCCGGCGTCAATCGA
TGACTACCGTACATGGCTCTTCTTACAGGTTTATTTGGTTTGGACTGGAG
ATGGTAAGCCTCTTCATACATTTTACGTGCCTGCTCCCACTCCTCATCGG
CACGCCCGTGACGAGGGCGTTCATGCCGCGTCTCAATGGAGCCACTTTCT
TGGGGCCGTCAAATGCGCTGTCACCAGTAAATGTGGCACACAGTAGAAAT
CGAGGCATTTTTTGCATGAGGAGCAATGAAATGAGAACGACAAGATTCGG
TCTTTAACGGCTTTAGTCAGACTCTTCCTGACGCTTCAGTAGTCTGCATC
CATGATTCCGCCCGTCCTCTCGTATCCCAATCCGCTGTTTTGGCATCCCT
TCGGGATGGTTCGGTGCACGGTGCAGCGGTCCTCGGTGTACCAATGAAAG
CAACTGTTAAGGAATCTGCAGATGGAGAATTTGTGTTGAGGACTATGAAT
CGCTCACGTCTCTGGGAAATTCAGACTCCCCAGGTGATCAAGCCTGACAT
CCTGTCTGAAGCCTTTGCGCTGGTAACAGAGAAGGGCTTGGAAGTCACGG
ACGACGTGTCCATGGTCGAACAGGTGGGCAGGCCTGTGAAGCTAACGATG
GGGGAATATACAAACATAAAGCTGACGACGCCAGAGGATATTGGTGTCGC
TGAGGGGTTCTTGAGAGAGCGAGCTGAGGGTAAACTGTAGGATCGTCATT
GTACTTGACAAGAGCTACCGCCAAGAATTCTCGTTTCTCCAAGAAGAGGA
CCCTCGTATCGTCTTTGCCGACCCTGGGAAATAACTGTGGAAGGCGTGTC
TGTGGTGCTCCTTGCGGGCGGAGTGGGAAAGCGGATGAAGGCCGATCGAC
CAAAGCAATTTATAGAGCTTCTAGGAAAACCAGTTCTTTTGCATTCCCTT
GAAATCTTTAGTACCTTGCCCGGCGTCAATCGATGACTACCGTACATGGC
TCTTCTTACAGGTTTATTTGGTTTGGACTGGAGATGGTAAGCCTCTTCAT
ACATTTTACGTGCCTGCTCCCACTCCTCATCGGCACGCCCGTGACGAGGG
CGTTCATGCCGCGTCTCAATGGAGCCACTTTCTTGGGGCCGTCAAATGCG
CTGTCACCAGTAAATGTGGCACACAGTAGAAATCGAGGCATTTTTTGCAT
GAGGAGCAATGAAATGAGAACGACAAGATTCGGTCTTTAACGGCTTTAGT
CAGACTCTTCCTGACGCTTCAGTAGTCTGCATCCATGATTCCGCCCGTCC
TCTCGTATCCCAATCCGCTGTTTTGGCATCCCTTCGGGATGGTTCGGTGC
ACGGTGCAGCGGTCCTCGGTGTACCAATGAAAGCAACTGTTAAGGAATCT
GCAGATGGAGAATTTGTGTTGAGGACTATGAATCGCTCACGTCTCTGGGA
AATTCAGACTCCCCAGGTGATCAAGCCTGACATCCTGTCTGAAGCCTTTG
CGCTGGTAACAGAGAAGGGCTTGGAAGTCACGGACGACGTGTCCATGGTC
GAACAGGTGGGCAGGCCTGTGAAGCTAACGATGGGGGAATATACAAACAT
AAAGCTGACGACGCCAGAGGATATTGGTGTCGCTGAGGGGTTCTTGAGAG
AGCGAGCTGAGGGTAAACTGTAGGATCGTCATTGTACTTGACAAGAGCTA
CCGCCAAGAATTCTCGTTTCTCCAAGAAGAGGACCCTCGTATCGTCTTTG
CCGACCCTGGGAAATAACTGTGGAAGGCGTGTCTGTGGTGCTCCTTGCGG
GCGGAGTGGGAAAGCGGATGAAGGCCGATCGACCAAAGCAATTTATAGAG
CTTCTAGGAAAACCAGTTCTTTTGCATTCCCTTGAAATCTTTAGTACCTT
GCCCGGCGTCAATCGATGACTACCGTACATGGCTCTTCTTACAGGTTTAT
TTGGTTTGGACTGGAGATGGTAAGCCTCTTCATACATTTTACGTGCCTGC
TCCCACTCCTCATCGGCACGCCCGTGACGAGGGCGTTCATGCCGCGTCTC
AATGGAGCCACTTTCTTGGGGCCGTCAAATGCGCTGTCACCAGTAAATGT
GGCACACAGTAGAAATCGAGGCATTTTTTGCATGAGGAGCAATGAAATGA
GAACGACAAGATTCGGTCTTTAACGGCTTTAGTCAGACTCTTCCTGACGC
TTCAGTAGTCTGCATCCATGATTCCGCCCGTCCTCTCGTATCCCAATCCG
CTGTTTTGGCATCCCTTCGGGATGGTTCGGTGCACGGTGCAGCGGTCCTC
GGTGTACCAATGAAAGCAACTGTTAAGGAATCTGCAGATGGAGAATTTGT
GTTGAGGACTATGAATCGCTCACGTCTCTGGGAAATTCAGACTCCCCAGG
TGATCAAGCCTGACATCCTGTCTGAAGCCTTTGCGCTGGTAACAGAGAAG
GGCTTGGAAGTCACGGACGACGTGTCCATGGTCGAACAGGTGGGCAGGCC
TGTGAAGCTAACGATGGGGGAATATACAAACATAAAGCTGACGACGCCAG
AGGATATTGGTGTCGCTGAGGGGTTCTTGAGAGAGCGAGCTGAGGGTAAA
CTGTAGGATCGTCATTGTACTTGACAAGAGCTACCGCCAAGAATTCTCGT
TTCTCCAAGAAGAGGACCCTCGTATCGTCTTTGCCGACCCTGGGAAATAA
CTGTGGAAGGCGTGTCTGTGGTGCTCCTTGCGGGCGGAGTGGGAAAGCGG
ATGAAGGCCGATCGACCAAAGCAATTTATAGAGCTTCTAGGAAAACCAGT
TCTTTTGCATTCCCTTGAAATCTTTAGTACCTTGCCCGGCGTCAATCGAT
GACTACCGTACATGGCTCTTCTTACAGGTTTATTTGGTTTGGACTGGAGA
TGGTAAGCCTCTTCATACATTTTACGTGCCTGCTCCCACTCCTCATCGGC
ACGCCCGTGACGAGGGCGTTCATGCCGCGTCTCAATGGAGCCACTTTCTT
GGGGCCGTCAAATGCGCTGTCACCAGTAAATGTGGCACACAGTAGAAATC
GAGGCATTTTTTGCATGAGGAGCAATGAAATG back to top
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