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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100011g64.3423.mrna |
| Orig protein id | gnl|cribi|Naga_100011g64.3423 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:194830..196387 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8254 ID=rna8254|Name=rna8254|organism=Nannochloropsis gaditana|type=mRNA|length=2713bp
AGCCGGGAGGAAAGATTGCCAGAACCCTACAGCTGAGAGGGTTGAGGGAG
GGCAGAGACAGCGGCGCATAGCACCTCAAGTCCGAACAAGACTGGCGAAG
TGAGCTCCCACAGTGATCCTCGTCAAGTGATCAAAAGGAGGATGCTGAGA
ACTAATGTTCTGCAAGGCGAAGTGCACCGGTCTTGGGTGTGGCTGAGTCC
TGCAGGTGCCAAGCACGTGATCGACTTATGGCATGATACAGTAACTGGCG
TACGCTCCGTTGCAGTGGGCATGGAGGAAGTGCCCGGTTCCATGGGCAGC
TCACCCTTTTTCTCCGCCGAAGCGCACCACATAAATTTTACCGTGGGGCA
AGACCAGTGTCGGGGAATGGTCATCATCGAGAAAGCGGGTCTGTTCTCCT
TTCGATATACGTGCGTGGTCAACGGCCGGCCGCTGAAGGCGACCCTGCAA
GGGCTGGCGGATGAGGACGAAGAGCGCTTCAACATAGCTATCCTGGGGGC
AGCCAACGCCTACAGCAGCAAGGAGAAATCGGTGACCTGGTACGAGTTGA
CGGTGACGCGCGGGTCGGACGGGGCTCGCACCTTAGTGCACAGACGCTAT
CGAGAGTTTGTCTGCCTCTTCGAGCAGGTTCACGCGGCTTTCAAAGGCCA
CCACTTGCGCTCAAGCCTGCCCGAACTCCCGGGCCGACAGCTGAAGCTGC
TCGTCGACCACAACGACACTGCCTTCGTGGAAGAACGCCGGCTCCTCCTT
GAGACGGCGCTGGGGAAGCTGCTGAGCGTGCCGCACGTGGGTGCCATGGT
GCCAGTGCAAGTTTTTTTGGGCTTTTTCGATCGGCTGAAGGAGCACAGCG
TCATTTTCACCCAGCGGGACCTGGGCCTGAGCATCACGCGGACGGTGGTG
CCCGAGGAGTCGATCGTGGTGACGCGCGTGAAGGAGGCGGGGCCCGGGGG
GCAGAAAAGCCGGGTCATGGTGGGGGACACGCTCTCCAAGGTGGGCGGCG
AGCCCGTCTCCAAGTTCGGGGGCTTCGATGGCGTCGCCTTTCAGGTCTCG
AGGGGGCTCCGGCCCATCGTCATCCATTTCCTTGAACCCGTGGACAGGAA
CCCTTCGCACGATTTCCTTCCCCCCGGGGAACCCCTCGACATCCCACCCG
TCCACGAGCAGCAGCGCCAGCGAAAAGCCGCGGCGCCGCACGCACAGTCT
CCTGTCGCCCCCCCGCCCGTGGTCCCCACCCCCTCGGGCCTGCCCACGCG
ACTGGCGGCAACCACGTCGGTGGCGCTCGGGGAGGAAGCATCGGGCGCCC
CGACAACCCCGCCCGTAGCCCTTCCAGCCCAGTCTAAACCGCCTGTGGCG
GCACTCCCACGCGTTGAGATCCGAGTTCCTAGTCGCGGGCCTGCATCGCG
CCCCCGTCCCAAGCTGGGTCCTTCCGAGGATGAGGTGGAACACTTGAAGA
TCGAGCGCATATCCAGCAAGCGCGAGGGCCAGGACCCGAACAAGTTGCAA
AGCGTGCTGGAAGCTGCTTTAGTGGAGGAGGAGAGGCGGTCGGAGGGACA
ATTGAACGGCTCGCTGAGCACGTCCTTGTCCTCGGCGGGAGTGGGGGAGC
CTAAAGATCCTCTTTTCGAGCTGGAGACGAGCGGCCGGGGCGCCTCAGAA
ATGGGCTCTACGACAGAGAACAAAGTGGCCAAAGGGCAAGCGACCGTGCC
GACAGCGACGCAAGACAATGAAACAGAGGGAGAAGGGAGCGGTGCTGAGA
ATCCCGCGGCCCCTATCCAGGCGTCAGAGTCGAGCTCGGGAGACACACTG
GCCGAGGAAGGGCCAGACTCCGATGCATTGTCCCACGACCCTTCTGAACC
TCTAGCTGCGCTTGCGCTTGACACGCAGGAGCTTGGAGAGCAGGAAAATG
CTGAGGATGGGCCTGGAGTCACCGTGGAGGAGCCGCATTCTCCAGTATCC
GCGCCGCCTCCTGTAGCTCCTGCCCCTCCCGCTTTGCCTTCTTACGAACC
TCCCCCATCCATTCCTGCCGCTCAACCTGCCTCTGTTTCCTTGATCATCT
CTTCTACCAGCTCTGGCGTTCCCTCTTCTACATCCCACGACCCTCCTCCA
TCCACTTCTGCAGTCTCCCTTGCCCCTGCCTCCACTCTTCGTTCTCTCTC
GCCGCCTCTCCCTGTCATTTTCCCAACCTCGAGCCCGCCGACCACTACCC
ATCCGGTGCGTGCAGTTTGTGAAGCGGAGGAAATGGCGGCGGCGGACGTT
ACCTCCAAAATCTCCCACTTGACGGATCAGCGTCATGCAACGGAAGATAC
CCTTGGGGGCGGTGCTTCCCGGGTAGGAAAAGATGAAGCCATAGGGGCGG
GACCCATCGATTTGACAGCGCCAGCGGATGTCGACGCCCACACGTCTCAG
ACGTCAGGCGTGCATTCTCAGTCTCACGACAGCCCCCCTTCCGTGGTGGC
CCACTCACACGATCACCTGTCCCCACGCCAGCTCCATCACGACTCCCGGC
TCAAGACGCCGCCACGGCTTGAGAAGGCCAAACTGGAGGAAGAGGGGGAT
GTCGCGGGGGGAGCGGAAACTAAAGAAGAGCTAGTGCCGCCGTCTCCTTT
TGAAGACTATATGTGAAGAACAGTGGACATATTGTGGGCGCAGGCAGAAG
GGTTGTAAGTGGATATTGAAGGAGAAAGTACAGGCGCGCAAAAACAATGA
ACACATAGAAAGC back to topprotein sequence of rna8254 >rna8254-protein ID=rna8254-protein|Name=rna8254|organism=Nannochloropsis gaditana|type=polypeptide|length=446bp
MGGSTVTRSRRTAAARRTGLSSSLPPCTPFKNALTIRSPAAATAEDCPSQ
HAPKAAVKNPSCVKLDFEKSSVSHSSTAVAAAVALDVCKPECSGSDRRAL
VLPAGLPTSPAASSRLPAKKQTEGTKVDESSFVLKLETQDVEEARRAVRY
ARLHQRPLLLRGLFRETVKSFTPDQLQCLPEDVKVCADDKTGIGFQPLRD
WGVPHKRVRKPTAAAVRVATAKKGGSRGSDSSQSGSSNHNGTIEAEDSTG
SMPSNWGRIASIMSEKPLQTRLWARFMQKDLFAFRTKTGHSALADFAASI
HQGCKPMSSNMIVTGNAAPSAAGRCFEMKSDAHQDEYHNFMVVASGAKIW
ALAALTEEQVAKGRKTKGRLSSSFRLDAVDRTKNRTPEEHEVAGLFETVW
MGPGDVLFNPAWVWHQVNSEPQTLAYSVMYPVGGGGKDARVGNEGR back to topmRNA from alignment at KK037248.1:194830..196387+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8254 ID=rna8254|Name=rna8254|organism=Nannochloropsis gaditana|type=mRNA|length=1558bp|location=Sequence derived from alignment at KK037248.1:194830..196387+ (Nannochloropsis gaditana)
GCCCGCGGTCTCACAGCGCAATACTTTCACAATCCTCCACACAGTACCAC
GAGAATGGGGGGCTCCACTGTCACTCGGAGCCGGCGAACTGCGGCAGCAC
GGAGGACCGGACTTTCGTCGAGCTTGCCTCCTTGCACACCTTTCAAGAAC
GCATTGACCATCAGAAGCCCGGCCGCTGCAACAGCCGAAGACTGTCCAAG
CCAACACGCACCCAAAGCTGCAGTCAAAAATCCTAGCTGCGTCAAATTGG
ATTTCGAAAAATCCTCCGTATCGCACTCCTCTACCGCGGTGGCCGCTGCC
GTTGCACTTGATGTTTGTAAACCGGAATGTTCGGGCTCCGATAGGCGGGC
TTTGGTTTTGCCTGCAGGTCTTCCAACTTCTCCGGCCGCATCCTCGAGAC
TTCCTGCTAAAAAACAAACCGAGGGCACCAAAGTTGATGAAAGCTCATTC
GTTTTGAAACTCGAGActcaggacgtggaggaagcgcggcGCGCCGTCCG
CTACGCCAGGTTACACCAACGACCGTTGCTCCTGCGGGGTCTCTTCCGGG
AGACCGTGAAGAGCTTCACGCCCGATCAGCTCCAGTGCCTCCCAGAGGAT
GTCAAGGTGTGCGCGGATGACAAGACAGGAATCGGGTTTCAGCCTTTGCG
TGACTGGGGGGTTCCCCACAAGCGCGTTCGCAAACCTACCGCGGCGGCTG
TGAGAGTGGCGACGGCtaagaagggaggcagccgGGGCAGCGACTCGAGC
CAGAGCGGTAGCAGCAATCACAACGGAACAATTGAGGCGGAAGACAGTAC
CGGAAGCATGCCTAGCAACTGGGGTCGTATTGCCAGCATTATGAGCGAGA
AACCGCTGCAGACTCGGCTGTGGGCCCGCTTCATGCAGAAGGATTTGTTT
GCTTTCCGCACCAAAACCGGACACAGCGCTCTCGCGGACTTCGCTGCTTC
GATACATCAAGGTTGTAAGCCCATGTCGAGCAACATGATAGTCACAGGAA
ATGCAGCGCCTTCTGCCGCTGGGCGGTGCTTCGAGATGAAGTCCGATGCG
CACCAAGACGAGTACCACAACTTCATGGTGGTCGCCTCGGGTGCGAAAAT
ctgggccttggccgccctGACAGAGGAACAAGTGGCAAAGGGTCGcaaga
cgaagggaaggtTGAGCAGCTCGTTTCGCCTGGACGCGGTGGACCGGACG
AAGAACCGGACACCCGAGGAGCACGAGGTGGCCGGCCTGTTCGAGACCGT
CTGGATGGGCCCCGGCGACGTCCTCTTCAACCCAGCCTGGGTCTGGCACC
AGGTCAACAGCGAACCGCAGACGCTGGCGTACAGTGTCATGTACCCCGTA
GGGGGGGGTGGCAAGGACGCCCGTGTTGGAAACGAGGGACGCTGACAGCT
TCTGTTTCCTGGTAGGAGAGCGATGAGATGAAGAGCTCGACACGTGGTTC
AACAGGGAGTCAATGTTAGAGAAAGAAGACCAAAGGCCCTCATAAACAAA
TCAAAGTAGAATTTACCGAGGAAGTGCCGTGTGAGGAATTACAAACCGTT
GCCCGCCA back to topCoding sequence (CDS) from alignment at KK037248.1:194830..196387+ >rna8254 ID=rna8254|Name=rna8254|organism=Nannochloropsis gaditana|type=CDS|length=1341bp|location=Sequence derived from alignment at KK037248.1:194830..196387+ (Nannochloropsis gaditana)
ATGGGGGGCTCCACTGTCACTCGGAGCCGGCGAACTGCGGCAGCACGGAG
GACCGGACTTTCGTCGAGCTTGCCTCCTTGCACACCTTTCAAGAACGCAT
TGACCATCAGAAGCCCGGCCGCTGCAACAGCCGAAGACTGTCCAAGCCAA
CACGCACCCAAAGCTGCAGTCAAAAATCCTAGCTGCGTCAAATTGGATTT
CGAAAAATCCTCCGTATCGCACTCCTCTACCGCGGTGGCCGCTGCCGTTG
CACTTGATGTTTGTAAACCGGAATGTTCGGGCTCCGATAGGCGGGCTTTG
GTTTTGCCTGCAGGTCTTCCAACTTCTCCGGCCGCATCCTCGAGACTTCC
TGCTAAAAAACAAACCGAGGGCACCAAAGTTGATGAAAGCTCATTCGTTT
TGAAACTCGAGActcaggacgtggaggaagcgcggcGCGCCGTCCGCTAC
GCCAGGTTACACCAACGACCGTTGCTCCTGCGGGGTCTCTTCCGGGAGAC
CGTGAAGAGCTTCACGCCCGATCAGCTCCAGTGCCTCCCAGAGGATGTCA
AGGTGTGCGCGGATGACAAGACAGGAATCGGGTTTCAGCCTTTGCGTGAC
TGGGGGGTTCCCCACAAGCGCGTTCGCAAACCTACCGCGGCGGCTGTGAG
AGTGGCGACGGCtaagaagggaggcagccgGGGCAGCGACTCGAGCCAGA
GCGGTAGCAGCAATCACAACGGAACAATTGAGGCGGAAGACAGTACCGGA
AGCATGCCTAGCAACTGGGGTCGTATTGCCAGCATTATGAGCGAGAAACC
GCTGCAGACTCGGCTGTGGGCCCGCTTCATGCAGAAGGATTTGTTTGCTT
TCCGCACCAAAACCGGACACAGCGCTCTCGCGGACTTCGCTGCTTCGATA
CATCAAGGTTGTAAGCCCATGTCGAGCAACATGATAGTCACAGGAAATGC
AGCGCCTTCTGCCGCTGGGCGGTGCTTCGAGATGAAGTCCGATGCGCACC
AAGACGAGTACCACAACTTCATGGTGGTCGCCTCGGGTGCGAAAATctgg
gccttggccgccctGACAGAGGAACAAGTGGCAAAGGGTCGcaagacgaa
gggaaggtTGAGCAGCTCGTTTCGCCTGGACGCGGTGGACCGGACGAAGA
ACCGGACACCCGAGGAGCACGAGGTGGCCGGCCTGTTCGAGACCGTCTGG
ATGGGCCCCGGCGACGTCCTCTTCAACCCAGCCTGGGTCTGGCACCAGGT
CAACAGCGAACCGCAGACGCTGGCGTACAGTGTCATGTACCCCGTAGGGG
GGGGTGGCAAGGACGCCCGTGTTGGAAACGAGGGACGCTGA back to top
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