EWM22423.1, cds8230 (CDS) Nannochloropsis gaditana

Overview
NameEWM22423.1
Unique Namecds8230
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:194884..196224 +

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Properties
Property NameValue
Protein idEWM22423.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g64.3423.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:194884..196224 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22423.1 vs. NCBI_GenBank
Match: gi|553182847|ref|XP_005853794.1| (hypoxia-inducible factor alpha subunit [Nannochloropsis gaditana CCMP526] >gi|422295268|gb|EKU22567.1| hypoxia-inducible factor alpha subunit [Nannochloropsis gaditana CCMP526] >gi|585102929|gb|EWM22423.1| hypothetical protein Naga_100011g64 [Nannochloropsis gaditana])

HSP 1 Score: 920.228 bits (2377), Expect = 0.000e+0
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0 
Query:    1 MGGSTVTRSRRTAAARRTGLSSSLPPCTPFKNALTIRSPAAATAEDCPSQHAPKAAVKNPSCVKLDFEKSSVSHSSTAVAAAVALDVCKPECSGSDRRALVLPAGLPTSPAASSRLPAKKQTEGTKVDESSFVLKLETQDVEEARRAVRYARLHQRPLLLRGLFRETVKSFTPDQLQCLPEDVKVCADDKTGIGFQPLRDWGVPHKRVRKPTAAAVRVATAKKGGSRGSDSSQSGSSNHNGTIEAEDSTGSMPSNWGRIASIMSEKPLQTRLWARFMQKDLFAFRTKTGHSALADFAASIHQGCKPMSSNMIVTGNAAPSAAGRCFEMKSDAHQDEYHNFMVVASGAKIWALAALTEEQVAKGRKTKGRLSSSFRLDAVDRTKNRTPEEHEVAGLFETVWMGPGDVLFNPAWVWHQVNSEPQTLAYSVMYPVGGGGKDARVGNEGR 446
            MGGSTVTRSRRTAAARRTGLSSSLPPCTPFKNALTIRSPAAATAEDCPSQHAPKAAVKNPSCVKLDFEKSSVSHSSTAVAAAVALDVCKPECSGSDRRALVLPAGLPTSPAASSRLPAKKQTEGTKVDESSFVLKLETQDVEEARRAVRYARLHQRPLLLRGLFRETVKSFTPDQLQCLPEDVKVCADDKTGIGFQPLRDWGVPHKRVRKPTAAAVRVATAKKGGSRGSDSSQSGSSNHNGTIEAEDSTGSMPSNWGRIASIMSEKPLQTRLWARFMQKDLFAFRTKTGHSALADFAASIHQGCKPMSSNMIVTGNAAPSAAGRCFEMKSDAHQDEYHNFMVVASGAKIWALAALTEEQVAKGRKTKGRLSSSFRLDAVDRTKNRTPEEHEVAGLFETVWMGPGDVLFNPAWVWHQVNSEPQTLAYSVMYPVGGGGKDARVGNEGR
Sbjct:    1 MGGSTVTRSRRTAAARRTGLSSSLPPCTPFKNALTIRSPAAATAEDCPSQHAPKAAVKNPSCVKLDFEKSSVSHSSTAVAAAVALDVCKPECSGSDRRALVLPAGLPTSPAASSRLPAKKQTEGTKVDESSFVLKLETQDVEEARRAVRYARLHQRPLLLRGLFRETVKSFTPDQLQCLPEDVKVCADDKTGIGFQPLRDWGVPHKRVRKPTAAAVRVATAKKGGSRGSDSSQSGSSNHNGTIEAEDSTGSMPSNWGRIASIMSEKPLQTRLWARFMQKDLFAFRTKTGHSALADFAASIHQGCKPMSSNMIVTGNAAPSAAGRCFEMKSDAHQDEYHNFMVVASGAKIWALAALTEEQVAKGRKTKGRLSSSFRLDAVDRTKNRTPEEHEVAGLFETVWMGPGDVLFNPAWVWHQVNSEPQTLAYSVMYPVGGGGKDARVGNEGR 446
The following BLAST results are available for this feature:
BLAST of EWM22423.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|553182847|ref|XP_005853794.1|0.000e+0100.00hypoxia-inducible factor alpha subunit [Nannochlor... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8254rna8254Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications