EWM22480.1, cds8214 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM22480.1
Unique Name	cds8214
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	KK037248.1:152332..152772 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM22480.1
Product	hypothetical protein
Orig transcript id	gnl\|cribi\|Naga_100011g49.3480.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KK037248.1	supercontig	KK037248.1:152332..152772 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **INTERPRO**
Term	Definition
IPR029058	AB_hydrolase

Homology

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BLAST of EWM22480.1 vs. NCBI_GenBank
Match: gi|585102986|gb|EWM22480.1| (hypothetical protein Naga_100011g49 [Nannochloropsis gaditana])

HSP 1 Score: 305.834 bits (782), Expect = 1.969e-105
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0

Query:    1 MHIAVHHEKERRSVRIILYNGWLRDWTYPRLWMKSLAIHLSHTQYCVLGEGGHGLVDIDVEIVGNTVPVQTADSGRYIKHLSDMVGPAGPDENTFFIGQSIGCLVILRYLACLPPGFKVCIYACGKKYCFIFPSGSYEYQLANHGT 146
            MHIAVHHEKERRSVRIILYNGWLRDWTYPRLWMKSLAIHLSHTQYCVLGEGGHGLVDIDVEIVGNTVPVQTADSGRYIKHLSDMVGPAGPDENTFFIGQSIGCLVILRYLACLPPGFKVCIYACGKKYCFIFPSGSYEYQLANHGT
Sbjct:    1 MHIAVHHEKERRSVRIILYNGWLRDWTYPRLWMKSLAIHLSHTQYCVLGEGGHGLVDIDVEIVGNTVPVQTADSGRYIKHLSDMVGPAGPDENTFFIGQSIGCLVILRYLACLPPGFKVCIYACGKKYCFIFPSGSYEYQLANHGT 146

The following BLAST results are available for this feature:

BLAST of EWM22480.1 vs. NCBI_GenBank

BLAST of EWM22480.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1


Match Name	E-value	Identity	Description
gi\|585102986\|gb\|EWM22480.1\|	1.969e-105	100.00	hypothetical protein Naga_100011g49 [Nannochlorops...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna8238	rna8238	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications