EWM22530.1, cds8142 (CDS) Nannochloropsis gaditana

Overview
NameEWM22530.1
Unique Namecds8142
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:732396..732602 +
Alignment locationKK037247.1:732713..734743 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22530.1
ProductGlycosyltransferase AER61, uncharacterized
Orig transcript idgnl|cribi|Naga_100290g5.9869.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:732396..732602 +
KK037247.1supercontigKK037247.1:732713..734743 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016757transferase activity, transferring glycosyl groups
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR007657Glycosyltransferase_AER61
Homology
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|585103055|gb|EWM22530.1| (Glycosyltransferase AER61, uncharacterized [Nannochloropsis gaditana])

HSP 1 Score: 1487.24 bits (3849), Expect = 0.000e+0
Identity = 745/745 (100.00%), Postives = 745/745 (100.00%), Query Frame = 0
Query:    1 MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYPSLMERNSEIRKLGEQALTEEAEARTGGREGRQGGREGEGSMGYFYLCQARESFVKMLARHHREQCASLTLVSGLGPGGGWTRRYGLDGGGLEEEEEGEGGEKVPPRGHPHAKTTCFEGQELLWTHVHPPLPLSLTPYQPHPPLLPPPGSGTSSPPPSLPLTHSLFLLRLPNVYVQGPDGAVHDLYRTPPPLYRTNSTSRPHARHRREESRTEPASPPPCHIYAPSAGCYLALGSQLSYPDRSLPLVGAASLLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWERLNITLIVPPSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQGFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPLEGQVPANGFEDIVWVNEEEVVAAVRAAWREGGEEGGEREEWDKEKDEL 745
            MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYPSLMERNSEIRKLGEQALTEEAEARTGGREGRQGGREGEGSMGYFYLCQARESFVKMLARHHREQCASLTLVSGLGPGGGWTRRYGLDGGGLEEEEEGEGGEKVPPRGHPHAKTTCFEGQELLWTHVHPPLPLSLTPYQPHPPLLPPPGSGTSSPPPSLPLTHSLFLLRLPNVYVQGPDGAVHDLYRTPPPLYRTNSTSRPHARHRREESRTEPASPPPCHIYAPSAGCYLALGSQLSYPDRSLPLVGAASLLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWERLNITLIVPPSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQGFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPLEGQVPANGFEDIVWVNEEEVVAAVRAAWREGGEEGGEREEWDKEKDEL
Sbjct:    1 MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYPSLMERNSEIRKLGEQALTEEAEARTGGREGRQGGREGEGSMGYFYLCQARESFVKMLARHHREQCASLTLVSGLGPGGGWTRRYGLDGGGLEEEEEGEGGEKVPPRGHPHAKTTCFEGQELLWTHVHPPLPLSLTPYQPHPPLLPPPGSGTSSPPPSLPLTHSLFLLRLPNVYVQGPDGAVHDLYRTPPPLYRTNSTSRPHARHRREESRTEPASPPPCHIYAPSAGCYLALGSQLSYPDRSLPLVGAASLLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWERLNITLIVPPSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQGFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPLEGQVPANGFEDIVWVNEEEVVAAVRAAWREGGEEGGEREEWDKEKDEL 745          
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|553190958|ref|XP_005855300.1| (hypothetical protein NGA_0076000 [Nannochloropsis gaditana CCMP526] >gi|422293756|gb|EKU21056.1| hypothetical protein NGA_0076000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 307.76 bits (787), Expect = 1.001e-97
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0
Query:    1 MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYP 152
            MTRGVSGLRYLWYLLFLFAVWILSFSIGT VGDVGLV+LDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYP
Sbjct:    1 MTRGVSGLRYLWYLLFLFAVWILSFSIGTLVGDVGLVKLDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYP 152          
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|294950297|ref|XP_002786559.1| (hypothetical protein Pmar_PMAR005265 [Perkinsus marinus ATCC 50983] >gi|239900851|gb|EER18355.1| hypothetical protein Pmar_PMAR005265 [Perkinsus marinus ATCC 50983])

HSP 1 Score: 79.7221 bits (195), Expect = 6.195e-12
Identity = 65/200 (32.50%), Postives = 98/200 (49.00%), Query Frame = 0
Query:  538 VAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGL-RLLRSTLLPSFPP------AHARRSLVWLYRDPW--QPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPL----EGQVPANGFEDIVWVNEEEVVAAVRAA 724
            V +  +  Y W P + P+   LP H   C PP+ L R LRS ++           A  R  ++W+ R     + R + NE  L+ AL+ +     G   +  +G++ G   A+ +  +A VVVGVHGA L+N +FC+ GT ++EL    P  R Y Y+A A+GL Y  +     G+      +  V V+ E  V AVR A
Sbjct:  304 VELSEVVSYTWPPMVDPAYD-LPLH---CIPPSRLLRGLRSAMMKGSSDVGGGEEASNRPVVLWIVRKASRDESRILKNERRLVAALRNIE----GVDVREFDGAEEGAERAVAMFSRAAVVVGVHGAGLSNILFCSEGTTVIELGFANPLVRHYMYIAEALGLSYERVLLEGAGRDERAMGKKKVAVDVEAAVEAVRRA 495          
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|955161763|emb|CUG94234.1| (Hypothetical protein, putative [Bodo saltans])

HSP 1 Score: 78.1814 bits (191), Expect = 2.713e-11
Identity = 84/301 (27.91%), Postives = 121/301 (40.20%), Query Frame = 0
Query:  403 LLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWERLNITLIVP--PSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQGFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHA-----RRSLVWLY-RDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYR 695
            LLT FSG AFY HW+ ++LPRLL  R  L                    + TL+VP  P+G   R++D   + L   +   R                       R  R +S + E    + +  QP P                 D + A   SSP    H    A PA L   R  L+ + PP  A     ++  V +  RD        +   L+ A++++A      I  + E SK  L  +L +   A VVVGVHG  LAN + C   T LVE+       + Y+++A A+G+ YR
Sbjct:  321 LLTQFSGAAFY-HWMCEALPRLLAARTWLPNFD----------------SYTLLVPAFPNGVVPRFIDATFQSLFPEITNER-----------------------RGHRDVSYAKENAVAITYHSQPCP--------------ATTDSSSATEASSP--STHCSSLAHPALLSNARDALVKALPPIAAGEGTKKKPYVLVAGRDKDITMRNFDAEGLVAAIKQVATATHDVI--LFESSKQSLLESLALFHGAAVVVGVHGGALANIMACTETTSLVEIGFNTIGAQHYKHVAGALGMPYR 563          
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|1129204968|gb|OLQ07352.1| (hypothetical protein AK812_SmicGene9264 [Symbiodinium microadriaticum])

HSP 1 Score: 66.2402 bits (160), Expect = 1.520e-7
Identity = 55/166 (33.13%), Postives = 79/166 (47.59%), Query Frame = 0
Query:  568 PPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPWQPRA-VGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGL--IYRPLEGQVPANGFEDIVWVNEEEVVAAVRAAWREGGE 730
            P A LR LRS L P      A R+L+++ R     R+ + +E+     L++LA   L   FQV +GS      A ++  +AR+V+G HG  L+N +FC     + EL  + P    Y YL+  + L     PL       G  DI + N  E +  VRAA    GE
Sbjct:  427 PGAVLRGLRSALQPLAAQRMAPRALIFIKRKKGDMRSSLQDESWFTAQLKQLATPTLQ--FQVFDGSAKPKRTA-QLFARARIVIGAHGGALSNILFCPEDVEIFELGFRTPFAGHYRYLSKMLNLRMTLLPLVPDSRGIGSRDIAFANLTEAMEVVRAAALGSGE 589          
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|1129212741|gb|OLQ13777.1| (hypothetical protein AK812_SmicGene2133 [Symbiodinium microadriaticum])

HSP 1 Score: 64.6994 bits (156), Expect = 5.254e-7
Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 0
Query:  520 IVPWPFQPLPFHYNGSGVVA-----VQTLYLYDWAPALPPSSPP------LPPHLRLCAPPAGLRLLRS--TLLPSFPPAHA-RRSLVWLYRDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGA---LRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYR 695
            ++P+  +P   H+ G   VA     V  L++ DW  A  P SP       LPP   L      LR L +      + PPA A R+ L+W+ R     R V NEA LL A+  L    LG  + +   S + L  A   + +   A +VVGVHG+  AN VFC  GT ++++ + EP  +   + + A+G  YR
Sbjct:  259 VIPYDVRP---HFMGPARVAEPRFLVHQLHMVDWEDA--PGSPRREDVFLLPPRWAL----QRLRDLATWRVFGSNPPPATAGRKKLLWIQRAVATTRRVANEAELLHAMMGL----LGDGWSLQIFSDSPLPSARETVELFRSADIVVGVHGSGQANVVFCRPGTGIIDINLPEPHSQYTAHNSYALGFNYR 438          
The following BLAST results are available for this feature:
BLAST of EWM22530.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 6
Match NameE-valueIdentityDescription
gi|585103055|gb|EWM22530.1|0.000e+0100.00Glycosyltransferase AER61, uncharacterized [Nannoc... [more]
gi|553190958|ref|XP_005855300.1|1.001e-9798.68hypothetical protein NGA_0076000 [Nannochloropsis ... [more]
gi|294950297|ref|XP_002786559.1|6.195e-1232.50hypothetical protein Pmar_PMAR005265 [Perkinsus ma... [more]
gi|955161763|emb|CUG94234.1|2.713e-1127.91Hypothetical protein, putative [Bodo saltans][more]
gi|1129204968|gb|OLQ07352.1|1.520e-733.13hypothetical protein AK812_SmicGene9264 [Symbiodin... [more]
gi|1129212741|gb|OLQ13777.1|5.254e-732.64hypothetical protein AK812_SmicGene2133 [Symbiodin... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8166rna8166Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications