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Properties
| Property Name | Value |
|---|
| Product | Glycosyltransferase AER61, uncharacterized |
| Orig transcript id | gnl|cribi|Naga_100290g5.9869.mrna |
| Orig protein id | gnl|cribi|Naga_100290g5.9869 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:732345..735073 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8166 ID=rna8166|Name=rna8166|organism=Nannochloropsis gaditana|type=mRNA|length=1169bp
CATGCGTGATCATGGAGCCCGGTGTGGGCACCCGAACACCGTACGCAGGG
AAATGAAGCTGGGATAGATGACTATCCCTCACAGGTCTCTCCTTACCAGT
AGTAACTTTAAGAGCGACAGCTCCCGAGAACAGAATTCACAGCTTGTCTG
CTCGACAGACATGTCAGAGAACCTACATGGCAGTCATCGCGGCATGTACG
GTGTGCAGTCAATCATGCATGTGCGATGCTTGTGCCTGCAGTTGTATCTC
TCATGTTCGTCCTTTTTTTCCAGGTGCTTCCCCGCAGGAGGAAGAATTCC
CTACCCGATGGCGTCCATCAAGAGCCCCAAGCGGAGCCCAACAGCAAGCA
CTTTTGCGAGTTATAGCGGTCTTAAGAACAGTCTCACGCTCAAGCTAGTG
TTCCTGGCCATGTGTGCATGTGCCTTGGTGGCTGCCGTACACTCTCCGGA
AGACGATGGCGTCGATGTGATAGGCACTGCATTGCGAGGGGATCATGGAC
CTCGTCGAGCAAATATAATGGAACCTGCTGCCCTTGCCGTGGCGGCACCC
CCAGTTGCGGAGGTGCCGCCCGGCCCGGCTCAAGACATCACCCCTGAACC
CCCCCTTCTGTTCCCCGCGGATGCGCAGCTCCAAGATTTGACAGGCGCCC
TCGTCAATGCGAACGAGGCGCTGGCCAATCGGTCGGTCGGTTTGTATTTC
GGGGCAGGCTGGTGCAGTATGACCCGCGCGGCCAATCCAGGAGTGGCGGC
GTTTCTGAGGCCCAGAGAGTCGGAGGGCGTGACGCTGGTCTTCGTCTCCT
CAGACACGAATGCGGAGTCGCTCAATGAGCAGCAAGCATCCAACTTGTGG
CCCTTTGCCGTCCCCTTCGACAGCCCCCTCCGCCTGTCTCTCAAGGAGTT
GTACGGCGTATGGTCAAGCCTGGAGGTTGGGAAAATTCCTGGCAAGAGGC
GATCGGCAATTCCGACAGTGATGGTCGTGGGGAAGGATGGAACGGAGCTT
GCGCGGTTGGAAGTGGGTGCGCGGGGTATAAGTGAGCTGGACCGATGGAA
TTATTTGGAATGGAAGTGGGAGTGAAGTGAAAGAAGGAACTGGGAATTGG
AAGCACGACTACCCAACAGGAATCACGATATGAAGGAAGGAATTCAGAAA
AATAGTTTCGCTGTAGTCA back to topprotein sequence of rna8166 >rna8166-protein ID=rna8166-protein|Name=rna8166|organism=Nannochloropsis gaditana|type=polypeptide|length=745bp
MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHL
IEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSR
QASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKL
YPSLMERNSEIRKLGEQALTEEAEARTGGREGRQGGREGEGSMGYFYLCQ
ARESFVKMLARHHREQCASLTLVSGLGPGGGWTRRYGLDGGGLEEEEEGE
GGEKVPPRGHPHAKTTCFEGQELLWTHVHPPLPLSLTPYQPHPPLLPPPG
SGTSSPPPSLPLTHSLFLLRLPNVYVQGPDGAVHDLYRTPPPLYRTNSTS
RPHARHRREESRTEPASPPPCHIYAPSAGCYLALGSQLSYPDRSLPLVGA
ASLLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWER
LNITLIVPPSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQ
GFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAP
ALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPW
QPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVV
VGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPLEGQ
VPANGFEDIVWVNEEEVVAAVRAAWREGGEEGGEREEWDKEKDEL back to topmRNA from alignment at KK037247.1:732345..735073+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8166 ID=rna8166|Name=rna8166|organism=Nannochloropsis gaditana|type=mRNA|length=2729bp|location=Sequence derived from alignment at KK037247.1:732345..735073+ (Nannochloropsis gaditana)
ccctATGCTACAGACACAGGCATGTTTTTTCCCATCCGCTGATAGGACAA
CATGACTCGCGGCGTGTCAGGGCTACGATACCTTTGGTATCTACTTTTTC
TCTTCGCTGTCTGGATTCTATCCTTTTCCATCGGCACCTCGGTGGGGGAT
GTGGGTCTCGTCGAGCTCGACGAGTTGAATCTGAGCCCTGTCAAGCATTT
GATCGAGGCCTATGGATCGAaagtggaaaaggaagaattTCAGATGTTCC
AGGACAAGGTAATGCGTTCGTTTTCTAGACGGCCGCAACGGTGGAGGAAC
taaggagaagggcgggtgTAATGGTCGGTCATCTCAaagcctctccttct
ccctccgcggccaCCCAGGTTGCCATTCTCCCGCCGGACGCGGGGGGGCT
CACCCACTTTGGAAACATGGCTTTACGCGTCATGCAACGGCACATGCACG
CGCAAAGCCGTCAAGCGTCAGGGCCTCCTGGGGAtggacaggggggggag
gaagatgctATCTTGCCCGTCCTGCATGTGGCCATAaccctcttccacca
cgcGATCAGACTCACACGTCACAACGGTGCCCTATCATCGCTCGGTGTCC
TCTGGAAGCTCTACCCGTCTTTGATGGAACGAAATTCAGAAATTCGGAAG
CTGGGAGAACAGGCgttgacggaggaggcagaagccaggacaggagggag
ggagggaaggcaggggggacgcgagggggagggaagcatgggGTATTTCT
ATTTGTGTCAGGCCAGGGAGAGTTTCGTAAAGATGCTTGCACGGCACCAT
CGGGAGCAGTGTGCCTCCCTCACTCTGGTCTCAGGTttgggcccgggcgg
ggggtGGACTCGCCGATACGGCCTGGACGGGGGCGgtctggaagaggagg
aggagggagaggggggggaaaaggtgcCCCCTCGGGGCCATCCCCACGCC
AAGACCACCTGCTTCGAAGGGCAAGAGCTGCTGTGGACCCAcgtccatcc
ccctcttcccctctccctcaccccctaccagccccaccctcctctcctcc
ctcccccaggctcgggcacctcctcccccccccccagccttcccctcacc
cactctctcttccttctccgccttcccaaCGTCTATGTCCAGGGACCGGA
TGGGGCCGTCCACGACCTCTAccgcacccctccccccctctacCGCACGA
ACTCCACCAGCCGTCCGCACGCGAggcacaggagggaggagagtcGCACA
GagcctgcctccccccccccctgccacATTTATGCGCCCAGCGCCGGGTG
CTACCTGGCCCTCGGATCCCAATTAAGCTACCCGGATCGTAGCCTCCCAT
TGGTGGGCGCGGCCTCCCTGCTGACTGCTTTCTCGGGCGGTGCTTTCTAT
TACCACTGGCTGTTGGATTCCCTGCCCCGTTTGCTTTTGTTACGGCAGGC
CTTGCTGGAGGTCGGgcccgaaggagggaggggggggagggcgaaggagg
actgGGAGAGGCTGAATATCACCCTGAtcgtgcctccctccggcccgaAG
GCTCGGTACGTCGACGAAGGTCTGCGCCTCTTGGCACAAGCCTTGGacgg
caggagggaggagccgggggaggagccgggggagggaggggcggaggggg
agagggaacaAGGCTTTGACCGACCACGCACAGGTCGACCTCTCTCTTCG
TCAACGGAACCGGAACGGATTGTGCCCTGGCCGTTTCAGCCGTTACCCTT
TCACTACAACGGCTCGGGGGTTGTCGCTGTTCAAACCCTCTACCTCTACG
ACtgggcccccgccctccctccttcctcccctcccctccctccccacctc
cggcTGTGCGCACCCCCggccggcctccgccttctcaggtccaccctcct
cccttccttcccccccgcccacgcccgccgctCGTTGGTCTGGCTGTACC
GGGATCCATGGCAACCGCGCGCGGTGGGAAACGAAGCTGCCCTGCTCCTG
GCCTTGCAAAGGCTGGCTGAGACGGAATTGGGCGCAATTTTCCAGGTTCT
AGAGGGTTCAAAAGCAGGCTTATCTGGGGCCCtgcgcgtcctccctcagg
cgCGAGTGGTCGTCGGCGTGCACGGGGCCAATCTGGCCAACGCTGTTTTT
TGCGCGAACGGCACCCGCTTGGTGGAACTCACGATGCAAGAGCCGGAGTT
TCGGGAGTATGAATACCTGGCTTCGGCGATAGGTTTGATCTACCGACCGT
TGGAAGGTCAGGTGCCTGCGAACGGGTTTGAGGACATCGTGTGGGtcaat
gaggaggaggtggtggcggcggtccgggcggcgtggagggaaggagggga
agaagggggggagagggaggaatgggacaaggagaaggacgagttATGAA
AGGccgaaaggaaggaaagataGCATTGTGACGAGATAAAGTGGGAAATG
TTGtaaattttaaaaaaagtaTGGTCTCGAAAGGTCTAGGACGCGACCAG
GTCTGTCCTTGTGGGTAGAAGGGGCTGCAAGCTCCaatgagggaaagaaa
atttTGATTCCTCTGAAATTTATGAGCGATACCGTGTGTACATAGTGTTG
ATACTCGCATTTGAATGGAACGTGACGCTCTTTCGCACACACATTTCCTC
TCATACATTGGACGCTTGGACAAGTCCCTTGTCTCTGCCGCCCTTCCTGC
AGGCACTATCCCTctgaaaaaaaaggaca back to topCoding sequence (CDS) from alignment at KK037247.1:732345..735073+ >rna8166 ID=rna8166|Name=rna8166|organism=Nannochloropsis gaditana|type=CDS|length=4476bp|location=Sequence derived from alignment at KK037247.1:732345..735073+ (Nannochloropsis gaditana)
ATGACTCGCGGCGTGTCAGGGCTACGATACCTTTGGTATCTACTTTTTCT
CTTCGCTGTCTGGATTCTATCCTTTTCCATCGGCACCTCGGTGGGGGATG
TGGGTCTCGTCGAGCTCGACGAGTTGAATCTGAGCCCTGTCAAGCATTTG
ATCGAGGCCTATGGATCGAaagtggaaaaggaagaattTCAGATGTTCCA
GGACAAGGTTGCCATTCTCCCGCCGGACGCGGGGGGGCTCACCCACTTTG
GAAACATGGCTTTACGCGTCATGCAACGGCACATGCACGCGCAAAGCCGT
CAAGCGTCAGGGCCTCCTGGGGAtggacaggggggggaggaagatgctAT
CTTGCCCGTCCTGCATGTGGCCATAaccctcttccaccacgcGATCAGAC
TCACACGTCACAACGGTGCCCTATCATCGCTCGGTGTCCTCTGGAAGCTC
TACCCGTCTTTGATGGAACGAAATTCAGAAATTCGGAAGCTGGGAGAACA
GGCgttgacggaggaggcagaagccaggacaggagggagggagggaaggc
aggggggacgcgagggggagggaagcatgggGTATTTCTATTTGTGTCAG
GCCAGGGAGAGTTTCGTAAAGATGCTTGCACGGCACCATCGGGAGCAGTG
TGCCTCCCTCACTCTGGTCTCAGGTttgggcccgggcggggggtGGACTC
GCCGATACGGCCTGGACGGGGGCGgtctggaagaggaggaggagggagag
gggggggaaaaggtgcCCCCTCGGGGCCATCCCCACGCCAAGACCACCTG
CTTCGAAGGGCAAGAGCTGCTGTGGACCCAcgtccatccccctcttcccc
tctccctcaccccctaccagccccaccctcctctcctccctcccccaggc
tcgggcacctcctcccccccccccagccttcccctcacccactctctctt
ccttctccgccttcccaaCGTCTATGTCCAGGGACCGGATGGGGCCGTCC
ACGACCTCTAccgcacccctccccccctctacCGCACGAACTCCACCAGC
CGTCCGCACGCGAggcacaggagggaggagagtcGCACAGagcctgcctc
cccccccccctgccacATTTATGCGCCCAGCGCCGGGTGCTACCTGGCCC
TCGGATCCCAATTAAGCTACCCGGATCGTAGCCTCCCATTGGTGGGCGCG
GCCTCCCTGCTGACTGCTTTCTCGGGCGGTGCTTTCTATTACCACTGGCT
GTTGGATTCCCTGCCCCGTTTGCTTTTGTTACGGCAGGCCTTGCTGGAGG
TCGGgcccgaaggagggaggggggggagggcgaaggaggactgGGAGAGG
CTGAATATCACCCTGAtcgtgcctccctccggcccgaAGGCTCGGTACGT
CGACGAAGGTCTGCGCCTCTTGGCACAAGCCTTGGacggcaggagggagg
agccgggggaggagccgggggagggaggggcggagggggagagggaacaA
GGCTTTGACCGACCACGCACAGGTCGACCTCTCTCTTCGTCAACGGAACC
GGAACGGATTGTGCCCTGGCCGTTTCAGCCGTTACCCTTTCACTACAACG
GCTCGGGGGTTGTCGCTGTTCAAACCCTCTACCTCTACGACtgggccccc
gccctccctccttcctcccctcccctccctccccacctccggcTGTGCGC
ACCCCCggccggcctccgccttctcaggtccaccctcctcccttccttcc
cccccgcccacgcccgccgctCGTTGGTCTGGCTGTACCGGGATCCATGG
CAACCGCGCGCGGTGGGAAACGAAGCTGCCCTGCTCCTGGCCTTGCAAAG
GCTGGCTGAGACGGAATTGGGCGCAATTTTCCAGGTTCTAGAGGGTTCAA
AAGCAGGCTTATCTGGGGCCCtgcgcgtcctccctcaggcgCGAGTGGTC
GTCGGCGTGCACGGGGCCAATCTGGCCAACGCTGTTTTTTGCGCGAACGG
CACCCGCTTGGTGGAACTCACGATGCAAGAGCCGGAGTTTCGGGAGTATG
AATACCTGGCTTCGGCGATAGGTTTGATCTACCGACCGTTGGAAGGTCAG
GTGCCTGCGAACGGGTTTGAGGACATCGTGTGGGtcaatgaggaggaggt
ggtggcggcggtccgggcggcgtggagggaaggaggggaagaaggggggg
agagggaggaatgggacaaggagaaggacgagttATGAATGACTCGCGGC
GTGTCAGGGCTACGATACCTTTGGTATCTACTTTTTCTCTTCGCTGTCTG
GATTCTATCCTTTTCCATCGGCACCTCGGTGGGGGATGTGGGTCTCGTCG
AGCTCGACGAGTTGAATCTGAGCCCTGTCAAGCATTTGATCGAGGCCTAT
GGATCGAaagtggaaaaggaagaattTCAGATGTTCCAGGACAAGGTTGC
CATTCTCCCGCCGGACGCGGGGGGGCTCACCCACTTTGGAAACATGGCTT
TACGCGTCATGCAACGGCACATGCACGCGCAAAGCCGTCAAGCGTCAGGG
CCTCCTGGGGAtggacaggggggggaggaagatgctATCTTGCCCGTCCT
GCATGTGGCCATAaccctcttccaccacgcGATCAGACTCACACGTCACA
ACGGTGCCCTATCATCGCTCGGTGTCCTCTGGAAGCTCTACCCGTCTTTG
ATGGAACGAAATTCAGAAATTCGGAAGCTGGGAGAACAGGCgttgacgga
ggaggcagaagccaggacaggagggagggagggaaggcaggggggacgcg
agggggagggaagcatgggGTATTTCTATTTGTGTCAGGCCAGGGAGAGT
TTCGTAAAGATGCTTGCACGGCACCATCGGGAGCAGTGTGCCTCCCTCAC
TCTGGTCTCAGGTttgggcccgggcggggggtGGACTCGCCGATACGGCC
TGGACGGGGGCGgtctggaagaggaggaggagggagaggggggggaaaag
gtgcCCCCTCGGGGCCATCCCCACGCCAAGACCACCTGCTTCGAAGGGCA
AGAGCTGCTGTGGACCCAcgtccatccccctcttcccctctccctcaccc
cctaccagccccaccctcctctcctccctcccccaggctcgggcacctcc
tcccccccccccagccttcccctcacccactctctcttccttctccgcct
tcccaaCGTCTATGTCCAGGGACCGGATGGGGCCGTCCACGACCTCTAcc
gcacccctccccccctctacCGCACGAACTCCACCAGCCGTCCGCACGCG
AggcacaggagggaggagagtcGCACAGagcctgcctccccccccccctg
ccacATTTATGCGCCCAGCGCCGGGTGCTACCTGGCCCTCGGATCCCAAT
TAAGCTACCCGGATCGTAGCCTCCCATTGGTGGGCGCGGCCTCCCTGCTG
ACTGCTTTCTCGGGCGGTGCTTTCTATTACCACTGGCTGTTGGATTCCCT
GCCCCGTTTGCTTTTGTTACGGCAGGCCTTGCTGGAGGTCGGgcccgaag
gagggaggggggggagggcgaaggaggactgGGAGAGGCTGAATATCACC
CTGAtcgtgcctccctccggcccgaAGGCTCGGTACGTCGACGAAGGTCT
GCGCCTCTTGGCACAAGCCTTGGacggcaggagggaggagccgggggagg
agccgggggagggaggggcggagggggagagggaacaAGGCTTTGACCGA
CCACGCACAGGTCGACCTCTCTCTTCGTCAACGGAACCGGAACGGATTGT
GCCCTGGCCGTTTCAGCCGTTACCCTTTCACTACAACGGCTCGGGGGTTG
TCGCTGTTCAAACCCTCTACCTCTACGACtgggcccccgccctccctcct
tcctcccctcccctccctccccacctccggcTGTGCGCACCCCCggccgg
cctccgccttctcaggtccaccctcctcccttccttcccccccgcccacg
cccgccgctCGTTGGTCTGGCTGTACCGGGATCCATGGCAACCGCGCGCG
GTGGGAAACGAAGCTGCCCTGCTCCTGGCCTTGCAAAGGCTGGCTGAGAC
GGAATTGGGCGCAATTTTCCAGGTTCTAGAGGGTTCAAAAGCAGGCTTAT
CTGGGGCCCtgcgcgtcctccctcaggcgCGAGTGGTCGTCGGCGTGCAC
GGGGCCAATCTGGCCAACGCTGTTTTTTGCGCGAACGGCACCCGCTTGGT
GGAACTCACGATGCAAGAGCCGGAGTTTCGGGAGTATGAATACCTGGCTT
CGGCGATAGGTTTGATCTACCGACCGTTGGAAGGTCAGGTGCCTGCGAAC
GGGTTTGAGGACATCGTGTGGGtcaatgaggaggaggtggtggcggcggt
ccgggcggcgtggagggaaggaggggaagaagggggggagagggaggaat
gggacaaggagaaggacgagttATGA back to top
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