EWM22530.1, cds8142 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|585103055|gb|EWM22530.1| (Glycosyltransferase AER61, uncharacterized [Nannochloropsis gaditana]) HSP 1 Score: 1487.24 bits (3849), Expect = 0.000e+0 Identity = 745/745 (100.00%), Postives = 745/745 (100.00%), Query Frame = 0 Query: 1 MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYPSLMERNSEIRKLGEQALTEEAEARTGGREGRQGGREGEGSMGYFYLCQARESFVKMLARHHREQCASLTLVSGLGPGGGWTRRYGLDGGGLEEEEEGEGGEKVPPRGHPHAKTTCFEGQELLWTHVHPPLPLSLTPYQPHPPLLPPPGSGTSSPPPSLPLTHSLFLLRLPNVYVQGPDGAVHDLYRTPPPLYRTNSTSRPHARHRREESRTEPASPPPCHIYAPSAGCYLALGSQLSYPDRSLPLVGAASLLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWERLNITLIVPPSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQGFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPLEGQVPANGFEDIVWVNEEEVVAAVRAAWREGGEEGGEREEWDKEKDEL 745 MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYPSLMERNSEIRKLGEQALTEEAEARTGGREGRQGGREGEGSMGYFYLCQARESFVKMLARHHREQCASLTLVSGLGPGGGWTRRYGLDGGGLEEEEEGEGGEKVPPRGHPHAKTTCFEGQELLWTHVHPPLPLSLTPYQPHPPLLPPPGSGTSSPPPSLPLTHSLFLLRLPNVYVQGPDGAVHDLYRTPPPLYRTNSTSRPHARHRREESRTEPASPPPCHIYAPSAGCYLALGSQLSYPDRSLPLVGAASLLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWERLNITLIVPPSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQGFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPLEGQVPANGFEDIVWVNEEEVVAAVRAAWREGGEEGGEREEWDKEKDEL Sbjct: 1 MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYPSLMERNSEIRKLGEQALTEEAEARTGGREGRQGGREGEGSMGYFYLCQARESFVKMLARHHREQCASLTLVSGLGPGGGWTRRYGLDGGGLEEEEEGEGGEKVPPRGHPHAKTTCFEGQELLWTHVHPPLPLSLTPYQPHPPLLPPPGSGTSSPPPSLPLTHSLFLLRLPNVYVQGPDGAVHDLYRTPPPLYRTNSTSRPHARHRREESRTEPASPPPCHIYAPSAGCYLALGSQLSYPDRSLPLVGAASLLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWERLNITLIVPPSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQGFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPLEGQVPANGFEDIVWVNEEEVVAAVRAAWREGGEEGGEREEWDKEKDEL 745
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|553190958|ref|XP_005855300.1| (hypothetical protein NGA_0076000 [Nannochloropsis gaditana CCMP526] >gi|422293756|gb|EKU21056.1| hypothetical protein NGA_0076000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 307.76 bits (787), Expect = 1.001e-97 Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0 Query: 1 MTRGVSGLRYLWYLLFLFAVWILSFSIGTSVGDVGLVELDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYP 152 MTRGVSGLRYLWYLLFLFAVWILSFSIGT VGDVGLV+LDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYP Sbjct: 1 MTRGVSGLRYLWYLLFLFAVWILSFSIGTLVGDVGLVKLDELNLSPVKHLIEAYGSKVEKEEFQMFQDKVAILPPDAGGLTHFGNMALRVMQRHMHAQSRQASGPPGDGQGGEEDAILPVLHVAITLFHHAIRLTRHNGALSSLGVLWKLYP 152
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|294950297|ref|XP_002786559.1| (hypothetical protein Pmar_PMAR005265 [Perkinsus marinus ATCC 50983] >gi|239900851|gb|EER18355.1| hypothetical protein Pmar_PMAR005265 [Perkinsus marinus ATCC 50983]) HSP 1 Score: 79.7221 bits (195), Expect = 6.195e-12 Identity = 65/200 (32.50%), Postives = 98/200 (49.00%), Query Frame = 0 Query: 538 VAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGL-RLLRSTLLPSFPP------AHARRSLVWLYRDPW--QPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYRPL----EGQVPANGFEDIVWVNEEEVVAAVRAA 724 V + + Y W P + P+ LP H C PP+ L R LRS ++ A R ++W+ R + R + NE L+ AL+ + G + +G++ G A+ + +A VVVGVHGA L+N +FC+ GT ++EL P R Y Y+A A+GL Y + G+ + V V+ E V AVR A Sbjct: 304 VELSEVVSYTWPPMVDPAYD-LPLH---CIPPSRLLRGLRSAMMKGSSDVGGGEEASNRPVVLWIVRKASRDESRILKNERRLVAALRNIE----GVDVREFDGAEEGAERAVAMFSRAAVVVGVHGAGLSNILFCSEGTTVIELGFANPLVRHYMYIAEALGLSYERVLLEGAGRDERAMGKKKVAVDVEAAVEAVRRA 495
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|955161763|emb|CUG94234.1| (Hypothetical protein, putative [Bodo saltans]) HSP 1 Score: 78.1814 bits (191), Expect = 2.713e-11 Identity = 84/301 (27.91%), Postives = 121/301 (40.20%), Query Frame = 0 Query: 403 LLTAFSGGAFYYHWLLDSLPRLLLLRQALLEVGPEGGRGGRAKEDWERLNITLIVP--PSGPKARYVDEGLRLLAQALDGRREEPGEEPGEGGAEGEREQGFDRPRTGRPLSSSTEPERIVPWPFQPLPFHYNGSGVVAVQTLYLYDWAPALPPSSPPLPPHLRLCAPPAGLRLLRSTLLPSFPPAHA-----RRSLVWLY-RDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYR 695 LLT FSG AFY HW+ ++LPRLL R L + TL+VP P+G R++D + L + R R R +S + E + + QP P D + A SSP H A PA L R L+ + PP A ++ V + RD + L+ A++++A I + E SK L +L + A VVVGVHG LAN + C T LVE+ + Y+++A A+G+ YR Sbjct: 321 LLTQFSGAAFY-HWMCEALPRLLAARTWLPNFD----------------SYTLLVPAFPNGVVPRFIDATFQSLFPEITNER-----------------------RGHRDVSYAKENAVAITYHSQPCP--------------ATTDSSSATEASSP--STHCSSLAHPALLSNARDALVKALPPIAAGEGTKKKPYVLVAGRDKDITMRNFDAEGLVAAIKQVATATHDVI--LFESSKQSLLESLALFHGAAVVVGVHGGALANIMACTETTSLVEIGFNTIGAQHYKHVAGALGMPYR 563
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|1129204968|gb|OLQ07352.1| (hypothetical protein AK812_SmicGene9264 [Symbiodinium microadriaticum]) HSP 1 Score: 66.2402 bits (160), Expect = 1.520e-7 Identity = 55/166 (33.13%), Postives = 79/166 (47.59%), Query Frame = 0 Query: 568 PPAGLRLLRSTLLPSFPPAHARRSLVWLYRDPWQPRA-VGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGALRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGL--IYRPLEGQVPANGFEDIVWVNEEEVVAAVRAAWREGGE 730 P A LR LRS L P A R+L+++ R R+ + +E+ L++LA L FQV +GS A ++ +AR+V+G HG L+N +FC + EL + P Y YL+ + L PL G DI + N E + VRAA GE Sbjct: 427 PGAVLRGLRSALQPLAAQRMAPRALIFIKRKKGDMRSSLQDESWFTAQLKQLATPTLQ--FQVFDGSAKPKRTA-QLFARARIVIGAHGGALSNILFCPEDVEIFELGFRTPFAGHYRYLSKMLNLRMTLLPLVPDSRGIGSRDIAFANLTEAMEVVRAAALGSGE 589
BLAST of EWM22530.1 vs. NCBI_GenBank
Match: gi|1129212741|gb|OLQ13777.1| (hypothetical protein AK812_SmicGene2133 [Symbiodinium microadriaticum]) HSP 1 Score: 64.6994 bits (156), Expect = 5.254e-7 Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 0 Query: 520 IVPWPFQPLPFHYNGSGVVA-----VQTLYLYDWAPALPPSSPP------LPPHLRLCAPPAGLRLLRS--TLLPSFPPAHA-RRSLVWLYRDPWQPRAVGNEAALLLALQRLAETELGAIFQVLEGSKAGLSGA---LRVLPQARVVVGVHGANLANAVFCANGTRLVELTMQEPEFREYEYLASAIGLIYR 695 ++P+ +P H+ G VA V L++ DW A P SP LPP L LR L + + PPA A R+ L+W+ R R V NEA LL A+ L LG + + S + L A + + A +VVGVHG+ AN VFC GT ++++ + EP + + + A+G YR Sbjct: 259 VIPYDVRP---HFMGPARVAEPRFLVHQLHMVDWEDA--PGSPRREDVFLLPPRWAL----QRLRDLATWRVFGSNPPPATAGRKKLLWIQRAVATTRRVANEAELLHAMMGL----LGDGWSLQIFSDSPLPSARETVELFRSADIVVGVHGSGQANVVFCRPGTGIIDINLPEPHSQYTAHNSYALGFNYR 438 The following BLAST results are available for this feature:
BLAST of EWM22530.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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