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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100993g1.6882.mrna |
| Orig protein id | gnl|cribi|Naga_100993g1.6882 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:639175..640996 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8128 ID=rna8128|Name=rna8128|organism=Nannochloropsis gaditana|type=mRNA|length=813bp
ATGGAGGAAGGGACGGCCACTGCATCACTGGCAGGTGTGGTGAAAATGGA
CGACGACGACTTAGACGCCCTCTTGGATGACGCGGCAGAGGATGTGTTAA
GTGCCACTACCCCCCAGAATACATCTGTCGATGCACAAATCCCAGCCTCC
GTGTCCGCCCACTCACCATCCGATAGTATGCTGGAGGACGCCATTTCCTC
GGTTTTCGCACAGCCCGGGCCACCTTCCTCGTCCAGCAAACCCAGACATG
GTATGCTCCCCCTCCCTCGCCCTCTGACCTCGCCTCCCAAGAGGGTGAAA
GCCCCTCCCACGTTGGAGGATGCCTTGTCTGCAGTACTGCCAGCCCCTGA
GGCGGAAAAATGGCGGGCGATCATTCAGGCCGATGTTCCTCGGCTGGAAG
GAATGCGCACACATCCTCCCAGCTTTGCGTACCGATCCTTCCTTGCCCGT
GGTGGCGGGGACTATCCGAGGCCTGCACGTCCCGCGAAGGGCGATAGGGA
GGGAGAAGAGGAAGGCGAGGCACACGTGCCATGGAAAGAGAGCGAGGGCA
AGGGCGGGCAGGACCCGGGCGCCGTGCTTACGGGCTTAATGATGCGGGCC
TGCACCAAGGCCGGGGTGGCCGACACGGAAGGGCTTCGGCAGGGACTGAA
ATCCTACCCGGAAGCGACCAAGAGGCTGGAGGCTTTGTTCCTCAAGCAAC
TCGCCCGGGACCTGAAGCCTGTGGTGGCGGAGGACGAGAATTTCGACCCG
ACGCGCTTCCCGGCCACAGCCAGGAACATATTGGGGAGGGCGGAGTCGGG
GGGGGAGGGGTGA back to topprotein sequence of rna8128 >rna8128-protein ID=rna8128-protein|Name=rna8128|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MARKSGPSTREKWKLLPLLLLPLLHPAAAFVPPYRNPDIAFDAREALVTD
NRVESISFRRLSVKCAEATSSAPPASPPQRPPSSPRSSEANQRSVISSTL
PGGNWPPNGFRPFKSLREENGDVVLDVDEPHQPLIAPLTSQFFAGFQLRE
LDDSNMNTFLKDTGKIQKTLRTLLWFAYLLWPYIGFGIFSSILAQLLLAT
VSQEHVEQGSFLTMLDVKDYPDLKIGHGFIGSILGFSIAFRTNAAYDRYY
EVAKSSASSWRTAVPSSETCTPSSSRLPPFPLQPPPAPPSPSLTTPPSSS
SAATSDVASTSSSPSSASRCGSPCRAFRPTRTWVRSLSPTPPSTSTPPSP
TSSTSFPRRKQNATRLSPLAPAPVLSRRRLISFFRF back to topmRNA from alignment at KK037247.1:639175..640996+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8128 ID=rna8128|Name=rna8128|organism=Nannochloropsis gaditana|type=mRNA|length=1822bp|location=Sequence derived from alignment at KK037247.1:639175..640996+ (Nannochloropsis gaditana)
ATGGCCAGAAAAAGTGGGCCGTCCACAAGAGAGAAGTGGaagctccttcc
cctccttctcctccccctcctccaccctgctGCGGCCTTCGTTCCTCCCT
ACCGCAATCCCGACATCGCCTTTGACGCACGTGAAGCTTTGGTTACGGAC
AACAGAGTTGAGTCCATCTCATTCCGCCGTCTGTCGGTGAAATGTGCTGA
GGCGACCTCGAGCGCccccccagcctcccctccccagcgccctccctcct
cccccagatCTTCTGAGGCGAATCAACGCTCAGTcatctcttccaccctc
cctggtgGCAATTGGCCCCCGAACGGCTTTCGTCCCTTCAAATCCTTGCG
AGAAGAGAACGGCGACGTGGtcctggacgtggacgagccCCATCAGCCTT
TGATCGCCCCCCTGACCTCTCAATTCTTCGCTGGCTTTCAGTTGCGAGAG
CTGGACGACAGCAACATGAATACATTCTTGAAAGACACGGGGAAAATACA
GAAAACGTAAgcggacgggagggcggatttgggggagggaaggagagagg
gataggGCGAAGAAGCCATGTCTGTACGTCACGCGGTGCGTCGCTGGAAC
CCGCTGGGACCCCTGACCAGGCGTGCTCAAGGCCCTAGGGGATGCCGCCT
TCCAAACATCCTCACCTTGCACACGCACGTACTCCTGTTTCGCTTTCTGC
ACCAATGCCCTCATCCCCCtgaccctgcctcccttccacgcctccccctc
cccctcctcctttctttcctcagcTTACGGACCCTCCTGTGGTTCGCCTA
CCTGCTCTGGCCCTACATCGGCTTCGGAATTTTCAGCTCCATCCTCGCCC
AGCTCCTGCTCGCGACCGTGAGCCAGGAGCACGTGGAGCAAGGCTCCTTC
TTGACCATGCTGGACGTGAAAGACTACCCGGATTTAAAAATCGGCCACGG
CTTCATCGGCTCCATCCTGGGCTTTTCCatcggtggggagggaggaaggg
ggggcgaggtagaggaggataTGGCGGGCGCTTCTTTTGGAAGTTCTCCT
CACGCTGAGTCCCATCCTTCTGATTGGTTGcccgtccctctttccctccc
tccctccttccctcccgccctccttccctccctccctccctcctccagcc
ttccGCACCAACGCGGCCTACGACCGCTACTACGAGGTCGCAAAATCCTC
AGGTTCGTCTGTCTCAAGGCACCGGTCAAGGCGCTGATCAGTCTCCCACG
GAGACGGTGCCTCAGGGTGGTGGCCAGGATCGGTCCCTCCATCGATTCCT
GGTAGCGAGTTATGAGTCTTTTTCCTGATcggtttttttttccccctttt
ttccccgccaaaccccctttttttccctcttcttttccctttcttcttcc
tcctttccctttttatTCTTGGCCCTCCAGCATCATCCTGGAGAACAGCC
GTTCCATCCTCCGAGACGTgtactccttcctcctcaaggctcccgccttt
ccctctccaacctcctcctgctcctccctccccgtccctgaCGACGCcgc
cgtcctcgtcatcaGCAGCGACCTCCGACGTCGCCTCAAcatcctcttcg
ccttcatCCGCCAGTCGGTGCGGGAGTCCTTGTCGGGCTTTTCGCCCAAC
TCGGACATGGGTACggtctctttctccaacTCCACCTTCTacctcgaccc
ctccctcccccacctcctcgacctcctttccaaggaggaagcagaacGCT
ACGCGgctctctcccctcgcgcccGCCCCGGTGCTGTCTCGGCGGAGATT
AATATCATTCTTCAGATTTTAA back to topCoding sequence (CDS) from alignment at KK037247.1:639175..640996+ >rna8128 ID=rna8128|Name=rna8128|organism=Nannochloropsis gaditana|type=CDS|length=4644bp|location=Sequence derived from alignment at KK037247.1:639175..640996+ (Nannochloropsis gaditana)
ATGGCCAGAAAAAGTGGGCCGTCCACAAGAGAGAAGTGGaagctccttcc
cctccttctcctccccctcctccaccctgctGCGGCCTTCGTTCCTCCCT
ACCGCAATCCCGACATCGCCTTTGACGCACGTGAAGCTTTGGTTACGGAC
AACAGAGTTGAGTCCATCTCATTCCGCCGTCTGTCGGTGAAATGTGCTGA
GGCGACCTCGAGCGCccccccagcctcccctccccagcgccctccctcct
cccccagatCTTCTGAGGCGAATCAACGCTCAGTcatctcttccaccctc
cctggtgGCAATTGGCCCCCGAACGGCTTTCGTCCCTTCAAATCCTTGCG
AGAAGAGAACGGCGACGTGGtcctggacgtggacgagccCCATCAGCCTT
TGATCGCCCCCCTGACCTCTCAATTCTTCGCTGGCTTTCAGTTGCGAGAG
CTGGACGACAGCAACATGAATACATTCTTGAAAGACACGGGGAAAATACA
GAAAACcTTACGGACCCTCCTGTGGTTCGCCTACCTGCTCTGGCCCTACA
TCGGCTTCGGAATTTTCAGCTCCATCCTCGCCCAGCTCCTGCTCGCGACC
GTGAGCCAGGAGCACGTGGAGCAAGGCTCCTTCTTGACCATGCTGGACGT
GAAAGACTACCCGGATTTAAAAATCGGCCACGGCTTCATCGGCTCCATCC
TGGGCTTTTCCatcgccttccGCACCAACGCGGCCTACGACCGCTACTAC
GAGGTCGCAAAATCCTCAGCATCATCCTGGAGAACAGCCGTTCCATCCTC
CGAGACGTgtactccttcctcctcaaggctcccgcctttccctctccaac
ctcctcctgctcctccctccccgtccctgaCGACGCcgccgtcctcgtca
tcaGCAGCGACCTCCGACGTCGCCTCAAcatcctcttcgccttcatCCGC
CAGTCGGTGCGGGAGTCCTTGTCGGGCTTTTCGCCCAACTCGGACATGGG
TACggtctctttctccaacTCCACCTTCTacctcgacccctccctccccc
acctcctcgacctcctttccaaggaggaagcagaacGCTACGCGgctctc
tcccctcgcgcccGCCCCGGTGCTGTCTCGGCGGAGATTAATATCATTCT
TCAGATTTTAAATGGCCAGAAAAAGTGGGCCGTCCACAAGAGAGAAGTGG
aagctccttcccctccttctcctccccctcctccaccctgctGCGGCCTT
CGTTCCTCCCTACCGCAATCCCGACATCGCCTTTGACGCACGTGAAGCTT
TGGTTACGGACAACAGAGTTGAGTCCATCTCATTCCGCCGTCTGTCGGTG
AAATGTGCTGAGGCGACCTCGAGCGCccccccagcctcccctccccagcg
ccctccctcctcccccagatCTTCTGAGGCGAATCAACGCTCAGTcatct
cttccaccctccctggtgGCAATTGGCCCCCGAACGGCTTTCGTCCCTTC
AAATCCTTGCGAGAAGAGAACGGCGACGTGGtcctggacgtggacgagcc
CCATCAGCCTTTGATCGCCCCCCTGACCTCTCAATTCTTCGCTGGCTTTC
AGTTGCGAGAGCTGGACGACAGCAACATGAATACATTCTTGAAAGACACG
GGGAAAATACAGAAAACcTTACGGACCCTCCTGTGGTTCGCCTACCTGCT
CTGGCCCTACATCGGCTTCGGAATTTTCAGCTCCATCCTCGCCCAGCTCC
TGCTCGCGACCGTGAGCCAGGAGCACGTGGAGCAAGGCTCCTTCTTGACC
ATGCTGGACGTGAAAGACTACCCGGATTTAAAAATCGGCCACGGCTTCAT
CGGCTCCATCCTGGGCTTTTCCatcgccttccGCACCAACGCGGCCTACG
ACCGCTACTACGAGGTCGCAAAATCCTCAGCATCATCCTGGAGAACAGCC
GTTCCATCCTCCGAGACGTgtactccttcctcctcaaggctcccgccttt
ccctctccaacctcctcctgctcctccctccccgtccctgaCGACGCcgc
cgtcctcgtcatcaGCAGCGACCTCCGACGTCGCCTCAAcatcctcttcg
ccttcatCCGCCAGTCGGTGCGGGAGTCCTTGTCGGGCTTTTCGCCCAAC
TCGGACATGGGTACggtctctttctccaacTCCACCTTCTacctcgaccc
ctccctcccccacctcctcgacctcctttccaaggaggaagcagaacGCT
ACGCGgctctctcccctcgcgcccGCCCCGGTGCTGTCTCGGCGGAGATT
AATATCATTCTTCAGATTTTAAATGGCCAGAAAAAGTGGGCCGTCCACAA
GAGAGAAGTGGaagctccttcccctccttctcctccccctcctccaccct
gctGCGGCCTTCGTTCCTCCCTACCGCAATCCCGACATCGCCTTTGACGC
ACGTGAAGCTTTGGTTACGGACAACAGAGTTGAGTCCATCTCATTCCGCC
GTCTGTCGGTGAAATGTGCTGAGGCGACCTCGAGCGCccccccagcctcc
cctccccagcgccctccctcctcccccagatCTTCTGAGGCGAATCAACG
CTCAGTcatctcttccaccctccctggtgGCAATTGGCCCCCGAACGGCT
TTCGTCCCTTCAAATCCTTGCGAGAAGAGAACGGCGACGTGGtcctggac
gtggacgagccCCATCAGCCTTTGATCGCCCCCCTGACCTCTCAATTCTT
CGCTGGCTTTCAGTTGCGAGAGCTGGACGACAGCAACATGAATACATTCT
TGAAAGACACGGGGAAAATACAGAAAACcTTACGGACCCTCCTGTGGTTC
GCCTACCTGCTCTGGCCCTACATCGGCTTCGGAATTTTCAGCTCCATCCT
CGCCCAGCTCCTGCTCGCGACCGTGAGCCAGGAGCACGTGGAGCAAGGCT
CCTTCTTGACCATGCTGGACGTGAAAGACTACCCGGATTTAAAAATCGGC
CACGGCTTCATCGGCTCCATCCTGGGCTTTTCCatcgccttccGCACCAA
CGCGGCCTACGACCGCTACTACGAGGTCGCAAAATCCTCAGCATCATCCT
GGAGAACAGCCGTTCCATCCTCCGAGACGTgtactccttcctcctcaagg
ctcccgcctttccctctccaacctcctcctgctcctccctccccgtccct
gaCGACGCcgccgtcctcgtcatcaGCAGCGACCTCCGACGTCGCCTCAA
catcctcttcgccttcatCCGCCAGTCGGTGCGGGAGTCCTTGTCGGGCT
TTTCGCCCAACTCGGACATGGGTACggtctctttctccaacTCCACCTTC
Tacctcgacccctccctcccccacctcctcgacctcctttccaaggagga
agcagaacGCTACGCGgctctctcccctcgcgcccGCCCCGGTGCTGTCT
CGGCGGAGATTAATATCATTCTTCAGATTTTAAATGGCCAGAAAAAGTGG
GCCGTCCACAAGAGAGAAGTGGaagctccttcccctccttctcctccccc
tcctccaccctgctGCGGCCTTCGTTCCTCCCTACCGCAATCCCGACATC
GCCTTTGACGCACGTGAAGCTTTGGTTACGGACAACAGAGTTGAGTCCAT
CTCATTCCGCCGTCTGTCGGTGAAATGTGCTGAGGCGACCTCGAGCGCcc
ccccagcctcccctccccagcgccctccctcctcccccagatCTTCTGAG
GCGAATCAACGCTCAGTcatctcttccaccctccctggtgGCAATTGGCC
CCCGAACGGCTTTCGTCCCTTCAAATCCTTGCGAGAAGAGAACGGCGACG
TGGtcctggacgtggacgagccCCATCAGCCTTTGATCGCCCCCCTGACC
TCTCAATTCTTCGCTGGCTTTCAGTTGCGAGAGCTGGACGACAGCAACAT
GAATACATTCTTGAAAGACACGGGGAAAATACAGAAAACcTTACGGACCC
TCCTGTGGTTCGCCTACCTGCTCTGGCCCTACATCGGCTTCGGAATTTTC
AGCTCCATCCTCGCCCAGCTCCTGCTCGCGACCGTGAGCCAGGAGCACGT
GGAGCAAGGCTCCTTCTTGACCATGCTGGACGTGAAAGACTACCCGGATT
TAAAAATCGGCCACGGCTTCATCGGCTCCATCCTGGGCTTTTCCatcgcc
ttccGCACCAACGCGGCCTACGACCGCTACTACGAGGTCGCAAAATCCTC
AGCATCATCCTGGAGAACAGCCGTTCCATCCTCCGAGACGTgtactcctt
cctcctcaaggctcccgcctttccctctccaacctcctcctgctcctccc
tccccgtccctgaCGACGCcgccgtcctcgtcatcaGCAGCGACCTCCGA
CGTCGCCTCAAcatcctcttcgccttcatCCGCCAGTCGGTGCGGGAGTC
CTTGTCGGGCTTTTCGCCCAACTCGGACATGGGTACggtctctttctcca
acTCCACCTTCTacctcgacccctccctcccccacctcctcgacctcctt
tccaaggaggaagcagaacGCTACGCGgctctctcccctcgcgcccGCCC
CGGTGCTGTCTCGGCGGAGATTAATATCATTCTTCAGATTTTAA back to top
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