EWM22585.1, cds8083 (CDS) Nannochloropsis gaditana

Overview
NameEWM22585.1
Unique Namecds8083
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:579840..580005 +
Alignment locationKK037247.1:580087..580119 +
Alignment locationKK037247.1:580201..580430 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22585.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100155g13.10226.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:579840..580005 +
KK037247.1supercontigKK037247.1:580087..580119 +
KK037247.1supercontigKK037247.1:580201..580430 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22585.1 vs. NCBI_GenBank
Match: gi|585103146|gb|EWM22585.1| (hypothetical protein Naga_100155g13 [Nannochloropsis gaditana])

HSP 1 Score: 285.034 bits (728), Expect = 2.434e-97
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 
Query:    1 MGNALHVVVDVEAGHNDRLGLEVDGATRLYGGLAVLNPVGENEVFHLITEKASVQVPMHTSSLVVEGDFSLRGISSTAFDGVVYGVAPHNRCSLPGTDDGKVAYGYLARPEPPAVRALPPLLQHGERHGVASGGRVGTSGRC 142
            MGNALHVVVDVEAGHNDRLGLEVDGATRLYGGLAVLNPVGENEVFHLITEKASVQVPMHTSSLVVEGDFSLRGISSTAFDGVVYGVAPHNRCSLPGTDDGKVAYGYLARPEPPAVRALPPLLQHGERHGVASGGRVGTSGRC
Sbjct:    1 MGNALHVVVDVEAGHNDRLGLEVDGATRLYGGLAVLNPVGENEVFHLITEKASVQVPMHTSSLVVEGDFSLRGISSTAFDGVVYGVAPHNRCSLPGTDDGKVAYGYLARPEPPAVRALPPLLQHGERHGVASGGRVGTSGRC 142
[Close]
BLAST of EWM22585.1 vs. NCBI_GenBank
Match: gi|585103153|gb|EWM22591.1| (hypothetical protein Naga_100483g2 [Nannochloropsis gaditana])

HSP 1 Score: 212.231 bits (539), Expect = 9.291e-62
Identity = 103/112 (91.96%), Postives = 105/112 (93.75%), Query Frame = 0 
Query:    1 MGNALHVVVDVEAGHNDRLGLEVDGATRLYGGLAVLNPVGENEVFHLITEKASVQVPMHTSSLVVEGDFSLRGISSTAFDGVVYGVAPHNRCSLPGTDDGKVAYGYLARPEP 112
            MGNALHVV DVEAGHND LGL VDGATRLYG +AVLNPVGENEVFHL T+KASVQVPM TSSLVVEGDFSLRGISSTAFDGVVYGV PHNRCSLPGTDDGKVAYGYLARPEP
Sbjct:  696 MGNALHVVADVEAGHNDHLGLVVDGATRLYGDVAVLNPVGENEVFHLSTDKASVQVPMQTSSLVVEGDFSLRGISSTAFDGVVYGVVPHNRCSLPGTDDGKVAYGYLARPEP 807
The following BLAST results are available for this feature:
BLAST of EWM22585.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103146|gb|EWM22585.1|2.434e-97100.00hypothetical protein Naga_100155g13 [Nannochlorops... [more]
gi|585103153|gb|EWM22591.1|9.291e-6291.96hypothetical protein Naga_100483g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8105rna8105Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications