EWM22607.1, cds8066 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|585103170|gb|EWM22607.1| (Lipid-binding START [Nannochloropsis gaditana]) HSP 1 Score: 701.819 bits (1810), Expect = 0.000e+0 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0
Query: 1 MSSETSLHGLHFFSYANLGQAWHNSWTCWGVPIRPRVGSTVAQTTAPLGQVLRRATLVLAAAACASLLVLTHGDVQEVGKLPLITLLGLAGASFTEEPASVGASRADSLSAVVGRTSVGVQIPPSSTQTQAKSLGRGSRQVTEGEDGGEGEWVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFAHW 342
MSSETSLHGLHFFSYANLGQAWHNSWTCWGVPIRPRVGSTVAQTTAPLGQVLRRATLVLAAAACASLLVLTHGDVQEVGKLPLITLLGLAGASFTEEPASVGASRADSLSAVVGRTSVGVQIPPSSTQTQAKSLGRGSRQVTEGEDGGEGEWVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFAHW
Sbjct: 1 MSSETSLHGLHFFSYANLGQAWHNSWTCWGVPIRPRVGSTVAQTTAPLGQVLRRATLVLAAAACASLLVLTHGDVQEVGKLPLITLLGLAGASFTEEPASVGASRADSLSAVVGRTSVGVQIPPSSTQTQAKSLGRGSRQVTEGEDGGEGEWVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFAHW 342
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|298712309|emb|CBJ33104.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 117.087 bits (292), Expect = 3.928e-27 Identity = 71/232 (30.60%), Postives = 118/232 (50.86%), Query Frame = 0
Query: 118 VGVQIPPSSTQTQAKSLGRGSRQVTEGEDGGEGEWVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPT-------GQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFAHW 342
+GV + P + A+ L S + +GE+ E VE G T R G S ++ LRG+ +VD HI + T FLNT+ + +WV +L EELPT G + +++Q +DMP P+ DRE ++RR+V D+R + A Y S +H ++P + VR +T W + G +T I+ E+ +PK + +V +Q + R ++ + + + HP+ W
Sbjct: 35 LGVLLSPEIMKYLAR-LRSSSVEPGDGEESIAWELVED---SGGFRTFSSRVQGSS-SLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVYRTSWILTSLGSSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVAGFVSSARNVELHPAMTKW 261
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|1082621979|gb|OFZ51367.1| (hypothetical protein A2417_08580 [Bdellovibrionales bacterium RIFOXYC1_FULL_37_79] >gi|1082632214|gb|OFZ59824.1| hypothetical protein A2381_17790 [Bdellovibrionales bacterium RIFOXYB1_FULL_37_110] >gi|1082638237|gb|OFZ65438.1| hypothetical protein A2577_18325 [Bdellovibrionales bacterium RIFOXYD1_FULL_36_51]) HSP 1 Score: 73.1738 bits (178), Expect = 2.225e-11 Identity = 59/190 (31.05%), Postives = 86/190 (45.26%), Query Frame = 0
Query: 151 EWVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSL--NPKLPVNGWLVQMMQNTYQRASL------LAMLDLIKR 332
EW ++ D +R +SG I ++ +D+ I +VLTV + S TEWV LD ++ + I Y FD P P DR+FL+ D K V A SV H P R+ VRG T T+L + T VE S + + + W+V M+Q T+ R + LA D++ R
Sbjct: 30 EWTKYSDEDSIQVYEAKR-AHRSGLIPIKVHTILDYPITKVLTVLTDASRKTEWVPRLDISKTVEQVAFGEFIDYASFDAPWPFEDRDFLVYIRTNYDIEKKEVKAIIYSVTHPQMPNRKGFVRGHTYSGN-TYLKSVFNDTKTYVEISFFNDYRGNIPKWIVNMVQLTWPRTFIGQLRGQLAKKDVVDR 217
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|1199229851|gb|OUR96712.1| (hypothetical protein A9Q84_10240 [Halobacteriovorax marinus]) HSP 1 Score: 68.5514 bits (166), Expect = 5.781e-10 Identity = 46/181 (25.41%), Postives = 84/181 (46.41%), Query Frame = 0
Query: 152 WVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKR 332
W E +G T + E + + +G+ ++ ++L V + +WV LD +EL + +IYQ F MPL +S+R+ + R ++ ++ G H SVEHA P VR E + + ++T + VE +PK + WLV ++Q ++ +L + +K+
Sbjct: 23 WDEINQEEG--ITVYSAEVPDNPLVAFKGKVIIEAPAKKILWVLADRKHRRDWVDRLDINDELEIISKVERVIYQSFKMPLFISNRDMVYRSVLSRNKETGVYKFHLFSVEHAKAPETIG-VRAELVNSSYLVKPLSANKTEVTVEILSDPKGLLPAWLVNLIQKSWPLKTLRGLRTQVKK 200
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|1182763729|emb|SMF29914.1| (START domain-containing protein [Pseudobacteriovorax antillogorgiicola]) HSP 1 Score: 68.5514 bits (166), Expect = 9.395e-10 Identity = 45/186 (24.19%), Postives = 84/186 (45.16%), Query Frame = 0
Query: 150 GEWVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSV-VRGETCKTLW-TFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRA 333
+W + + DG + +R+ S + G A +D ++++ V ++ +WV A + T I Y F MP P+SDR+F+ + + SVEH S P SV VRGE + + +K QT ++VE +PK + W+V ++Q + ++ + ++++
Sbjct: 26 NQWEQVKVEDG--ISVYRKSFEDSNVKGVAGAALIDAPASKIVWVLMDHEHKDDWVDKFRDARTIETPSRLTSIQYAAFSMPFPVSDRDFVYAYEFQYHSNRNMIEVDVKSVEHKSAPEDDSVGVRGEIIMGKYRLYPSKNGKQTYVEVEYLADPKGLLPSWIVNIVQKNWPYKTIKGLRKQVQKS 209
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|676387227|ref|XP_009036892.1| (hypothetical protein AURANDRAFT_64116 [Aureococcus anophagefferens] >gi|323452279|gb|EGB08153.1| hypothetical protein AURANDRAFT_64116 [Aureococcus anophagefferens]) HSP 1 Score: 67.781 bits (164), Expect = 1.832e-9 Identity = 46/167 (27.54%), Postives = 78/167 (46.71%), Query Frame = 0
Query: 178 LRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKR--AKPHPSFAHW 342
+ G+A V +AE++TVFL+ +W L E+ + A IYQ F P P+ DRE +++ T + + Y SV+ + P R VR + K W F A + +T+I S ++P + GW ++ + + +LA+++ K P F W
Sbjct: 45 VHGEAVVGLSMAELMTVFLDLEQYDKWDDTL--VEKRQWRADGADFIYQRFQQPWPVRDRELVLKMTTYPYPDENRLAVRYESVDDGT-PVARGAVRTKAQKVWWNFTAVSETETLISHYSCVDPGGAIPGWARDLVVQKWCASQILALVETAKELGLAPVEEFLGW 208
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|551546358|ref|XP_005761108.1| (hypothetical protein EMIHUDRAFT_446330 [Emiliania huxleyi CCMP1516] >gi|485609759|gb|EOD08679.1| hypothetical protein EMIHUDRAFT_446330 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 68.1662 bits (165), Expect = 1.920e-9 Identity = 48/169 (28.40%), Postives = 84/169 (49.70%), Query Frame = 0
Query: 176 IRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRR-SVVRGETCKTLWTFLA-KGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFAHW 342
+ + A+VD IA +L+VF +L+ +W L L G N + +Q + MP PL+DR+F++ D R + ++ +S H + P + VVR E ++ W+F A G + T + S+++PK + LV Q + + A+++ + P P F HW
Sbjct: 2 LEVSASATVDLSIAALLSVFAEPALNLKWNERLSEQTLLHAG--NRTVAHQLYPMPWPLTDRDFVLTCDERVDERLRSFFSSCSSTSHPAFPSQEPGVVRAELVRSSWSFTAVPGSESTHVTFSSAVDPKGALPRPLVAAAQRLGRDQLISALVEEARGRTPSPRFEHW 168
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|551556466|ref|XP_005765352.1| (hypothetical protein EMIHUDRAFT_437251 [Emiliania huxleyi CCMP1516] >gi|485615300|gb|EOD12923.1| hypothetical protein EMIHUDRAFT_437251 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 67.781 bits (164), Expect = 2.774e-9 Identity = 48/169 (28.40%), Postives = 84/169 (49.70%), Query Frame = 0
Query: 176 IRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRR-SVVRGETCKTLWTFLA-KGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFAHW 342
+ + A+VD IA +L+VF +L+ +W L L G N + +Q + MP PL+DR+F++ D R + ++ +S H + P + VVR E ++ W+F A G + T + S+++PK + LV Q + + A+++ + P P F HW
Sbjct: 2 LEVSASATVDLSIAALLSVFAEPALNLKWNERLSEQTLLHAG--NRTVAHQLYPMPWPLTDRDFVLTCDERVDERSRSFFSSCSSTSHPAFPSQEPGVVRAELVRSSWSFTAVPGSESTHVTFSSAVDPKGAIPRPLVAAAQRLGRDQLISALVEEARGRTPSPRFEHW 168
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|740338008|ref|WP_038174709.1| (hypothetical protein [Vibrio pacinii]) HSP 1 Score: 61.2326 bits (147), Expect = 2.511e-7 Identity = 42/189 (22.22%), Postives = 79/189 (41.80%), Query Frame = 0
Query: 147 GGEGEWVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASV-EHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAK 334
+ +W H + D + R S R +A ++ + ++ +FL+TS+ TEWV +D EE+ I + P P++DRE ++ ++ D + TV + ++ P VVR K+ W + T + + P + WLV ++ + +LL M ++ K
Sbjct: 21 SDQTDW--HLARDKLGIEVYNRSIEGSDFKEFRSEADINASLTSIIALFLDTSVGTEWVENIDQMEEIEHFDPTHSITKTYSKAPWPVADREAIVENHISQDDKTLTVTIEQQGLPDYLPHPSDHKVVRIPYLKSRWVLTPIDSETTHLSYQVLTEPGGTLPAWLVNLVSVSQPYNTLLGMQKMLHADK 207
BLAST of EWM22607.1 vs. NCBI_GenBank
Match: gi|1084994703|gb|OGS05771.1| (hypothetical protein A3G41_02975 [Elusimicrobia bacterium RIFCSPLOWO2_12_FULL_59_9]) HSP 1 Score: 60.4622 bits (145), Expect = 6.146e-7 Identity = 41/177 (23.16%), Postives = 76/177 (42.94%), Query Frame = 0
Query: 166 FRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQ-TVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFAH 341
++R+ +S + R +A +D + VL V +T +EWV + L E + YQ D P P R+++ R D K +V + + H+S P R VR + LW A G + T ++ ++P + WL + + +L + +++ +P+ F
Sbjct: 59 YKRKVPESRFVEFRARAILDAPVLSVLAVLDDTGGYSEWVPGNLEMKILEKVSETDEVFYQATDAPWPAKSRDYVGRFQFQKDDGKRSVEIEFRNTSHSSAPVRGDRVRMPFVRGLWVLQAAGDGRSTRAELGVHMDPGGWIPAWLANWVTRYFPLDTLKNLQRVLREKEPNADFVR 235 The following BLAST results are available for this feature:
BLAST of EWM22607.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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