EWM22642.1, cds8025 (CDS) Nannochloropsis gaditana

Overview
NameEWM22642.1
Unique Namecds8025
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:430796..431707 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22642.1
Productmetal ion transporter family
Orig transcript idgnl|cribi|Naga_100023g35.3958.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:430796..431707 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015095magnesium ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0015693magnesium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR026573MRS2/LPE10
Homology
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|585103207|gb|EWM22642.1| (metal ion transporter family [Nannochloropsis gaditana])

HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
Query:    1 MDIDLNGVEEEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIMVT 303
            MDIDLNGVEEEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIMVT
Sbjct:    1 MDIDLNGVEEEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIMVT 303          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|298709068|emb|CBJ31017.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 93.2041 bits (230), Expect = 2.129e-18
Identity = 79/294 (26.87%), Postives = 132/294 (44.90%), Query Frame = 0
Query:   12 EFEFLALEAVLMTINDHFKSKLKDLRPHI--IKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIMVT 303
            EFE  A+EA+L   +   + +++++   I  I N     G    ++++ DT R L + +   + + ++  + ++ +L+D+  L M++LTR              +Q  ED  P L+                                               A VL   ED +E E+LLE++L D N +    EL+    ++TE  V VKLD+ARN++LT G +F++ + C   GAL+SGIFGMNL +G+       N+  F V  +   V   TV    + A+ Y   I+V+
Sbjct:   76 EFELKAVEALLSVSSKRLEREVREVEKPIANIVNILEGPGKGATSAKNNDTFRVLLNSINVLENRAKARRRALLMVLEDDTDLAMMNLTR-------------MYQSPEDYLPPLS-----------------------------------------------AEVL---EDHEEMELLLEAYLQDINSIYNVLELLLNRARSTEALVMVKLDIARNRILTAGLVFSMASTCLTVGALVSGIFGMNLKSGL-----DSNNILFEVVAIG-TVCACTVAFCGVFAFFYRHGILVS 300          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|901806458|gb|KMZ63665.1| (Magnesium transporter MRS2 [Zostera marina])

HSP 1 Score: 85.1149 bits (209), Expect = 5.060e-15
Identity = 78/283 (27.56%), Postives = 127/283 (44.88%), Query Frame = 0
Query:   10 EEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLN--SEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSF--IVILMTVVG 288
            E  FEF  LE  L TI    +S + +L      N   +L +  +N  +++ + +R LKS +T   A+V+ +   +  LLDD E +  L+LTR + Q QQ +   +            AS   NE    Q    R              RT     SI          +L + ED +E E+LLE++    +    K   ++E + +TE+YV ++LD  RN+L+ +  +  +V+       LI+G F MN    +    G    F  FVG+ SF   ++L+ ++G
Sbjct:  161 ELPFEFQILEICLETICSFLESSVLELE----NNAYPILDDLAMNVSTKNLERVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMSQLYLTRKEMQNQQYESLMESG----------ASIPSNEVISPQSKLQR-----------LNSRTHASILSIA-------TSILSEDEDVEELEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLILTIVSFAIGINTLIAGAFAMNFNCELFEQKG---LFWPFVGLTSFGSFLVLLLILG 408          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|1214712348|gb|OWZ23296.1| (CorA Metal Ion Transporter [Phytophthora megakarya])

HSP 1 Score: 84.7297 bits (208), Expect = 6.232e-15
Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 0
Query:  181 DSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVIL 283
            DS+EAE+L+E++L D        EL++  + NTE+ V +KLD  RN LL I  +F+LV++  + G LISG+FGMNL +GV+   G      +F+G+V F ++L
Sbjct:  298 DSEEAEVLIENYLQDIFSTRTTAELLQHRIANTESLVTLKLDSKRNYLLGIELIFSLVSINISVGTLISGVFGMNLVSGVAEAKG------WFLGVVIFTIVL 394          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|669156952|ref|XP_008614038.1| (hypothetical protein SDRG_09860 [Saprolegnia diclina VS20] >gi|530734295|gb|EQC32537.1| hypothetical protein SDRG_09860 [Saprolegnia diclina VS20])

HSP 1 Score: 85.1149 bits (209), Expect = 6.307e-15
Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 0
Query:  177 MDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVG---IVSFIVILMTV 286
            M A DS+EAE LLE++L D + M  K  LI++ M NTEN V +K+D  RN LL+I T+F L+ +C  F   ++  FGMNL +G      +P+ F   +G    +S ++IL+ V
Sbjct:  306 MFAFDSEEAEALLEAYLQDIHSMRAKVRLIQQRMANTENVVMLKMDAVRNSLLSIDTMFGLIMLCLNFAMFVASSFGMNLVSGYET---TPHLFWGVLGSSVSISMVLILLGV 415          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|301094159|ref|XP_002997923.1| (CorA Metal Ion Transporter (MIT) Family [Phytophthora infestans T30-4] >gi|262109709|gb|EEY67761.1| CorA Metal Ion Transporter (MIT) Family [Phytophthora infestans T30-4])

HSP 1 Score: 84.7297 bits (208), Expect = 6.492e-15
Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 0
Query:  181 DSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVGIVSFIVILM--TVVGGSIL 292
            DS+EAE+L+E++L D        +L++  + NTE+ V +KLD  RN LL +  +F+LV++  + G LISG+FGMNL +GV+  SG      +F+G+V F V+L   T   G I 
Sbjct:  280 DSEEAEVLIENYLQDIFSTRTTADLLQHRIANTESLVTLKLDSKRNYLLRVQLVFSLVSINISVGTLISGVFGMNLTSGVADASG------WFLGVVIFTVVLFITTTYAGIIF 387          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|813120127|ref|XP_012196390.1| (hypothetical protein SPRG_02424 [Saprolegnia parasitica CBS 223.65] >gi|641538905|gb|KDO32726.1| hypothetical protein SPRG_02424 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 84.7297 bits (208), Expect = 6.615e-15
Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 0
Query:  177 MDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVG---IVSFIVILMTV 286
            M A DS+EAE LLE++L D + M  K  LI++ M NTEN V +K+D  RN LL+I T+F L+ +C  F   ++  FGMNL +G      +P+ F   +G    +S ++IL+ V
Sbjct:  304 MFAFDSEEAEALLEAYLQDIHSMRAKVRLIQQRMANTENVVMLKMDAVRNSLLSIDTMFGLIMLCLNFAMFVASSFGMNLVSGYET---TPHLFWGVLGSSVSISMVLILLGV 413          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|1173951053|gb|OQR98966.1| (CorA Metal Ion Transporter (MIT) Family [Achlya hypogyna])

HSP 1 Score: 84.7297 bits (208), Expect = 8.232e-15
Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 0
Query:  181 DSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFVG---IVSFIVILMTV 286
            DS+EAE LLE++L D + M  K  LI+  M NTEN V +K+D  RN LL+I T+F LV +C  F   ++  FGMNL +G      +P+ F   +G     SF+ I++ V
Sbjct:  310 DSEEAEALLEAYLQDIHSMRAKVGLIQRRMLNTENVVMLKMDAVRNSLLSIDTMFGLVMLCLNFAMFVASAFGMNLLSGYET---TPHIFWLVLGSSVTFSFVFIVLGV 415          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|567197106|ref|XP_006406476.1| (hypothetical protein EUTSA_v10020646mg [Eutrema salsugineum] >gi|557107622|gb|ESQ47929.1| hypothetical protein EUTSA_v10020646mg [Eutrema salsugineum])

HSP 1 Score: 83.1889 bits (204), Expect = 3.533e-14
Identity = 77/306 (25.16%), Postives = 142/306 (46.41%), Query Frame = 0
Query:   13 FEFLALEAVLMTINDHFKSKLKDLR----PHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQ--------KQEDQKPNLASAQKNEYHQQQEW-RFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMN----LFNGVSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILA-YMYVSRI 300
            FEF+ALEA L   +   +S+   L     P + K    +   +TLN E    +RQ+KS++     +V+ +   +  LLDD+E +  ++LT   +Q+ +       ++         +ED+   L     +E ++ + + R  D H+  +L S     +R    S G  T    + +  +  D +E E+LLE++    +  + K   ++E + +TE+Y+ + LD  +N+LL +G +     +  +    ++G+FGMN    LFN    G G                 L TV+GG++ + ++YV  I
Sbjct:  187 FEFVALEACLEAASSSLESEAVRLELEAHPALDKLTSKI---STLNLER---VRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLAQKLENSSASSMNESESVEIDLPEEDEDDRLPPEFASEANRDESYLRANDAHD--LLMSAHSALSRN---SRGTHTSSTRSAI-TNKFDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNQLLQMGVMLTTATLVMSAFIAVAGVFGMNITIELFNDEKAGPGR---------------FLWTVIGGTVGSIFLYVGAI 465          
BLAST of EWM22642.1 vs. NCBI_GenBank
Match: gi|1070956036|gb|OEL27213.1| (putative magnesium transporter MRS2-H [Dichanthelium oligosanthes])

HSP 1 Score: 82.4185 bits (202), Expect = 6.591e-14
Identity = 81/296 (27.36%), Postives = 129/296 (43.58%), Query Frame = 0
Query:   10 EEEFEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLHLTRTQSQQQQQQQQQQQHQKQEDQKPNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCSIGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNL-FNG---VSVGSGSPNSFPFFVGIVSFIVILMTVVGGSILAYMYVSRIM 301
            E  FEF  LE  L  +   F S L DL  H +     L  N  +++ + + +R LKS +T+  A V+ +   V  LLD  E++  LHL+R Q++ QQ Q               LASA  N                     F    +  R  SI  +         +D  D+   E+LLES+    + +  +  +++  + +TE+Y+ ++LD  RN+L+    +  +V+   A    I   F MNL  NG    +VG   P     FVG  S   +L+ VV   + AY + +R++
Sbjct:  259 ELPFEFQVLELTLEAVCLSFNSSLSDLNRHAVFVLDELTKN--VSTRNLERVRSLKSNLTSLLAGVQKVRDEVEHLLDHNENMAQLHLSRKQTKNQQDQAL-------------LASAAINSI-------------------FSSKTSLARPNSIINQAMGVATSATLDT-DAGNLEMLLESYFIQLDGIRNRIAMVRGYIVDTEDYINIQLDNQRNQLIQFHLILIIVSFGIAINTWIVASFAMNLPHNGDKNTAVGPFLP-----FVGATSSFCLLVVVV---LFAYAWRNRLL 511          
The following BLAST results are available for this feature:
BLAST of EWM22642.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103207|gb|EWM22642.1|0.000e+0100.00metal ion transporter family [Nannochloropsis gadi... [more]
gi|298709068|emb|CBJ31017.1|2.129e-1826.87conserved unknown protein [Ectocarpus siliculosus][more]
gi|901806458|gb|KMZ63665.1|5.060e-1527.56Magnesium transporter MRS2 [Zostera marina][more]
gi|1214712348|gb|OWZ23296.1|6.232e-1542.72CorA Metal Ion Transporter [Phytophthora megakarya... [more]
gi|669156952|ref|XP_008614038.1|6.307e-1541.59hypothetical protein SDRG_09860 [Saprolegnia dicli... [more]
gi|301094159|ref|XP_002997923.1|6.492e-1541.23CorA Metal Ion Transporter (MIT) Family [Phytophth... [more]
gi|813120127|ref|XP_012196390.1|6.615e-1541.59hypothetical protein SPRG_02424 [Saprolegnia paras... [more]
gi|1173951053|gb|OQR98966.1|8.232e-1542.20CorA Metal Ion Transporter (MIT) Family [Achlya hy... [more]
gi|567197106|ref|XP_006406476.1|3.533e-1425.16hypothetical protein EUTSA_v10020646mg [Eutrema sa... [more]
gi|1070956036|gb|OEL27213.1|6.591e-1427.36putative magnesium transporter MRS2-H [Dichantheli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8047rna8047Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications