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Properties
| Property Name | Value |
|---|
| Product | binding domain protein |
| Orig transcript id | gnl|cribi|Naga_100218g12.5293.mrna |
| Orig protein id | gnl|cribi|Naga_100218g12.5293 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:355395..356355 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8015 ID=rna8015|Name=rna8015|organism=Nannochloropsis gaditana|type=mRNA|length=2195bp
AAGTCACCTATGATCATCGAAGCCAAGCTCCACCAAAACGCAAGGCCCCC
CGCTGATCAGCGTCGGAAGCAAACCAAACCTCGCTGCCGCCGCCATGACT
TCCGGACTTTCACACCCTGGCTGAAGCCAGATATGTTTGATTCCAAGTCT
TGCTGCCTCTTCGAGTATGTCGACGGTGACTATTGGGGGTGTAACAACAG
ATACAGCCGTATTGGTAGGGTTCGGTAGGGAGGATAAGTTGGCGAGAGCG
GCAATGCCTTCAATCATCCTCTCTTTTGGATTGATGGGTGTAATGCTTTT
GCCATGCTGGATATAGCAACGTAGGACTTTATTCCCGAACTTCTCTCGGT
TTGTACTAGCCCCTACTACGGCAAAGCTGGAAGCTGACAGAAAAGCCGGA
ATTTTCGCGGCAGACATTTTACCGACGATTGTCGAGCGTACACTGCAGCA
GTGGGCGTTGTCAAAAGAGGATTCTATGATGCGGTGAAGTGGAATAGCCC
CCTCCTTTGCGGTGCGAGAGCTTAGCGAATGGCCTTCAAAGACAGATAAG
CTAGCAAATGGAACAACTGTGGTGGCGGGAGATGTAAAACCTCAAGATGT
GTAAATAGAAGGTAGACATAACATTTCCAATTGTCCGTTGAGCCCTTGAA
CCAGATGAAATAGCACCTGCAGGATACGTGGACTTCTTTCGATAGATCCG
ACTGAACTAGTGAATGTGCCTCCTATCGGGATTTGTCTCTGACAAACTCA
AGAGGATAAAGTTGAGACGCACACAGGTACATTTTGAAAACATATAACAG
AAAAGGATTGGATTACGGTCCCATGTACTGTCAAGGCGCATTATCAATCA
GTATCACCATGATGTACCAATTTGAACATTTCTTAGCTGTCCACGTGTAT
TACGGGGGCACCAGTTCAAATGCTTTGGCAGACGCTTCATGTATTTATTG
CTGTCAGGAGCACGTATTTTCAAGGCATCTTACTTTTCGTCCAAATCAGG
TGCATGAAATTGTACGCCGGTGTAGTTATCCGCGTTGTTGTGCGTGTGAA
CCTTAAAGTCGCACCGGCGTTAGAAAAACATCGCTGAAAAGGGCCTAGCA
GAGGTTCAACTGTCTCACAGCCGGTACACTATCCATTCCAGATAGACTCT
TGGTATCGCACGAGAGCCACGATGGTGAGGCCAGGTGTTGCGCACGAAAG
CAAACAAAGCCAAAAGCGTCCTTTCTTCCATTCTGGTGTCGTAAGTCCTC
TCTCGGCTCGTGCTGCTACCGCTTTTGGTAGCCCTGACGAAACATCCGCC
ACCGCCCCGGCTAGTGCCAGCCACCCGCAACACGGGGCCCAGGAGGAGGA
AGAGCAATTGCCGCAACAGAAACACAGGCATAAGTCTCATGTGGATGAGA
GGAAAAAGTCGAAAAAAGAAGATTTAGCTGTGGGCATAAACGCTTGGATC
ACAATGCCATCCACCGAGCGTGATATTTTTGTGGACAGGTGTCGAAAAGA
GATTGCACCTCTTTTGGGAGCCATTCCCCCAGCAGGGACATTAAGGGGTG
AGGAAGAAGCACACACAGACGACATAGGTCGGCGAGGAAGATGTGCACCG
ATGCATGGAATCACCGGAGGAGATAGAACACGCAAGAAAGCGAAACTTCG
CGTCCAAAAAGTCTTTTCATACCGAGATGGGACTGCGCAACACAAGTTTG
CGCGACAGTGTATTTGCATTGGTATCAATGAGGTCACTAGGGCTTTGGAG
AGGGATGAACTCTCCCTCATACTTATTTGCAGGGATGTCCGACCAGCACG
TCTCGTGGAGCATGTGGCTGTTTTAGCAGCGGTTCGCGATGTCCCCTTCT
TCCTTCTGCCTAAGGCCACATCGGCCCTAGGTCAGGCACTAGGCTTAAAG
TGTATAGCAGCTTTAGGTTTTCGGGGGGGGGAACTTATGAGACGCCTTAA
AAAAGGAGAAAATGATACAGACGGGAGCGATAATGACGCAGAACGTGTGG
TAATGGATGATGTGCGAAGTAGATTGCAGTCATTTCTGGATTTTTTGCTG
ACCAAGCAGGATTACATGAATGCTGTTCGGATTGATTAAGTAAAATAAAG
TTAAAAGTAAACGCACACGCAGTAGTTTTGAGTGCACCGCAGCAAGTCAC
AGATGAATGTAGCTTTCCAAAAAAATCACATTGCAAGTGCTCGAC back to topprotein sequence of rna8015 >rna8015-protein ID=rna8015-protein|Name=rna8015|organism=Nannochloropsis gaditana|type=polypeptide|length=137bp
MSAAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKER
MIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQP
GCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDHR back to topmRNA from alignment at KK037247.1:355395..356355+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8015 ID=rna8015|Name=rna8015|organism=Nannochloropsis gaditana|type=mRNA|length=961bp|location=Sequence derived from alignment at KK037247.1:355395..356355+ (Nannochloropsis gaditana)
TGCTCCTGACAGCAATAAATACATGAAGCGTCTGCCAAAGCATTTGAACT
GGTGCCCCCGTAATACACGTGGACAGCTAAGAAATGTTCAAATTGGTACA
TCATGGTGATACTGATTGATAATGCGCCTTGACAGTACATGGGACCGTAA
TCCAATCCTTTTCTGTTATATGTTTTCAAAATGTACCTGTGTGCGTCTCA
ACTTTATCCTCTTGAGTTTGTCAGAGACAAATCCCGATAGGAGGCACATT
CACTAGTTCAGTCGGATCTATCGAAAGAAGTCCACGTATCCTGCAGGTGC
TATTTCATCTGGTTCAAGGGCTCAACGGACAATTGGAAATGTTATGTCTA
CCTTCTATTTACACATCTTGAGGTTTTACATCTCCCGCCACCACAGTTGT
TCCATTTGCTAGCTTATCTGTCTTTGAAGGCCATTCGCTAAGCTCTCGCA
ccgcaaaggagggggctaTTCCACTTCACCGCATCATAGAATCCTCTTTT
GACAACGCCCACTGCTGCAGTGTACGCTCGACAATCGTCGGTAAAATGTC
TGCCGCGAAAATTCCGGCTTTTCTGTCAGCTTCCAGCTTTGCCGTAGTAG
GGGCTAGTACAAACCGAGAGAAGTTCGGGAATAAAGTCCTACGTTGCTAT
ATCCAGCATGGCAAAAGCATTACACCCATCAATCCAAAAGAGAGGATGAT
TGAAGGCATTGCCGCTCTCGCCAACTTATCCTCCCTACCGAACCCTACCA
ATACGGCTGTATCTGTTGTTACACCCCCAATAGTCACCGTCGACATACTC
GAAGAGGCAGCAAGACTTGGAATCAAACATATCTGGCTTCAGCCAGGGTG
TGAAAGTCCGGAAGtcatggcggcggcagcgagGTTTGGTTTGCTTCCGA
CGCTGATCAGCGGGGGGCCTTGCGTTTTGGTGGAGCTTGGCTTCGATGAT
CATAGGTGACT back to topCoding sequence (CDS) from alignment at KK037247.1:355395..356355+ >rna8015 ID=rna8015|Name=rna8015|organism=Nannochloropsis gaditana|type=CDS|length=414bp|location=Sequence derived from alignment at KK037247.1:355395..356355+ (Nannochloropsis gaditana)
ATGTCTGCCGCGAAAATTCCGGCTTTTCTGTCAGCTTCCAGCTTTGCCGT
AGTAGGGGCTAGTACAAACCGAGAGAAGTTCGGGAATAAAGTCCTACGTT
GCTATATCCAGCATGGCAAAAGCATTACACCCATCAATCCAAAAGAGAGG
ATGATTGAAGGCATTGCCGCTCTCGCCAACTTATCCTCCCTACCGAACCC
TACCAATACGGCTGTATCTGTTGTTACACCCCCAATAGTCACCGTCGACA
TACTCGAAGAGGCAGCAAGACTTGGAATCAAACATATCTGGCTTCAGCCA
GGGTGTGAAAGTCCGGAAGtcatggcggcggcagcgagGTTTGGTTTGCT
TCCGACGCTGATCAGCGGGGGGCCTTGCGTTTTGGTGGAGCTTGGCTTCG
ATGATCATAGGTGA back to top
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