EWM22681.1, cds7993 (CDS) Nannochloropsis gaditana

Overview
NameEWM22681.1
Unique Namecds7993
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:355940..356353 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22681.1
Productbinding domain protein
Orig transcript idgnl|cribi|Naga_100218g12.5293.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:355940..356353 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0048037cofactor binding
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR003781CoA-bd
Homology
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|585103247|gb|EWM22681.1| (binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 279.641 bits (714), Expect = 2.939e-95
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query:    1 MSAAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDHR 137
            MSAAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDHR
Sbjct:    1 MSAAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDHR 137          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|298708189|emb|CBJ30528.1| (CoA-binding domain protein [Ectocarpus siliculosus])

HSP 1 Score: 156.762 bits (395), Expect = 1.797e-46
Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 0
Query:    9 FLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGF 133
            FL+A  FAVVGASTNR KFGNKVLRCY+   K++ P+NP+E  IEG   + +LS LP+P + +VSVVTPP VT+ ++EEA RLG+K +WLQPG E  EV++ A   GL   +I G PCVLVELG+
Sbjct:    8 FLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGL--QIIHGEPCVLVELGY 130          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|1113348253|gb|OJW12044.1| (CoA-binding protein [Legionella sp. 39-23])

HSP 1 Score: 148.288 bits (373), Expect = 2.086e-43
Identity = 65/136 (47.79%), Postives = 101/136 (74.26%), Query Frame = 0
Query:    1 MSAAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDH 136
            M+  +I  F  + +FAV+GAS+NREK+GNKVLRCY Q+ K + P+NPKE++IEG++ +A++S LP+  ++ +S++TPP VT  I+EEA + GIK+IW+QPG ES + +    +  +   +I+GGPC+LV LG+ +H
Sbjct:    1 MTNQQIDLFFQSKAFAVIGASSNREKYGNKVLRCYQQNDKKVYPVNPKEKLIEGLSVIASVSDLPSEVDS-ISIITPPAVTEKIVEEAIQKGIKNIWMQPGAESDKAIQNCKQHKI--NIIAGGPCILVILGYKEH 133          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|966493524|ref|WP_058510312.1| (CoA-binding protein [Legionella steelei])

HSP 1 Score: 147.517 bits (371), Expect = 3.564e-43
Identity = 65/136 (47.79%), Postives = 100/136 (73.53%), Query Frame = 0
Query:    1 MSAAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDH 136
            M+  +I +F  + +FAV+GAS+NREK+GNKVLRCY Q+GK + P+NP+E++IEG++ +A +S LP    + +S++TPP VT  I+EEA + GIK+IW+QPG ES + +    +  +   +I+GGPC+LV LG+ +H
Sbjct:    1 MTNQQIDSFFQSKAFAVIGASSNREKYGNKVLRCYQQNGKKVYPVNPQEKLIEGLSVIALVSDLPREVES-ISIITPPAVTEKIVEEAIQKGIKNIWMQPGAESDKAIQNCKQHKI--NIIAGGPCILVILGYKEH 133          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|962284431|gb|KTD68197.1| (CoA-binding protein [Legionella steelei])

HSP 1 Score: 147.132 bits (370), Expect = 3.164e-42
Identity = 65/136 (47.79%), Postives = 100/136 (73.53%), Query Frame = 0
Query:    1 MSAAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDH 136
            M+  +I +F  + +FAV+GAS+NREK+GNKVLRCY Q+GK + P+NP+E++IEG++ +A +S LP    + +S++TPP VT  I+EEA + GIK+IW+QPG ES + +    +  +   +I+GGPC+LV LG+ +H
Sbjct:   61 MTNQQIDSFFQSKAFAVIGASSNREKYGNKVLRCYQQNGKKVYPVNPQEKLIEGLSVIALVSDLPREVES-ISIITPPAVTEKIVEEAIQKGIKNIWMQPGAESDKAIQNCKQHKI--NIIAGGPCILVILGYKEH 193          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|966429437|ref|WP_058471558.1| (CoA-binding protein [Legionella jordanis] >gi|962233291|gb|KTD17839.1| CoA-binding protein [Legionella jordanis])

HSP 1 Score: 142.124 bits (357), Expect = 4.668e-41
Identity = 66/130 (50.77%), Postives = 92/130 (70.77%), Query Frame = 0
Query:    6 IPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDD 135
            I  F S+ ++AVVGAS+NR KFGNKVLRCY+QH K++ P+NP E MIE + A+ +++ LP   N+ +S++TPP +T  I+ EA + GIK+IW+QPG ES   +      G+   +I GGPC+LVELGF D
Sbjct:    7 ITEFFSSKAYAVVGASSNRHKFGNKVLRCYLQHHKTVYPVNPHESMIESLTAVKSIADLPEEVNS-ISIITPPKITEQIVNEAIQKGIKNIWMQPGAESQLAVKQCLAQGI--NVIYGGPCLLVELGFKD 133          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|966394529|ref|WP_058440239.1| (CoA-binding protein [Legionella brunensis] >gi|962201911|gb|KTC86888.1| CoA-binding protein [Legionella brunensis])

HSP 1 Score: 142.124 bits (357), Expect = 5.670e-41
Identity = 67/130 (51.54%), Postives = 98/130 (75.38%), Query Frame = 0
Query:    3 AAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELG 132
            +AKI  FL+A +FAV+GASTNR+KFGNKVLRCY+QH K++ P+N +E  IEG+ ++  ++ LP P+ T++SV+TPP +T  I+E+A   GIK+IW+QPG ES   ++   +  +   +I+GGPC+LVELG
Sbjct:    6 SAKIKQFLAAEAFAVIGASTNRQKFGNKVLRCYLQHHKTVYPVNHREATIEGLDSVKEIADLP-PSVTSISVITPPPITEKIVEQAIIKGIKNIWMQPGAESEAALSNCLQHQI--NVIAGGPCILVELG 132          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|769991447|ref|WP_045107319.1| (CoA-binding protein [Legionella hackeliae])

HSP 1 Score: 141.739 bits (356), Expect = 8.704e-41
Identity = 67/133 (50.38%), Postives = 96/133 (72.18%), Query Frame = 0
Query:    4 AKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDH 136
            A+I  FLS+ +F VVGAS  R KFGNKVLRCY+QHGK+  PINP+E ++EGIA++  ++ LP+   + +S++TP  VT  ++EEA + GIK+IW+QPG ES + +    + G+   +I+ GPC+LVELGF D 
Sbjct:    5 AQINQFLSSKAFGVVGASGRRHKFGNKVLRCYLQHGKTAYPINPRESIVEGIASVETVTQLPSDVES-ISIITPAAVTERVVEEAIKKGIKNIWMQPGAESEKAIHDCNKNGI--NVIAKGPCLLVELGFIDE 134          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|731150807|emb|CEK09351.1| (CoA-binding protein [Legionella hackeliae] >gi|962228897|gb|KTD13506.1| CoA-binding protein [Legionella hackeliae])

HSP 1 Score: 141.354 bits (355), Expect = 1.256e-40
Identity = 67/133 (50.38%), Postives = 96/133 (72.18%), Query Frame = 0
Query:    4 AKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFDDH 136
            A+I  FLS+ +F VVGAS  R KFGNKVLRCY+QHGK+  PINP+E ++EGIA++  ++ LP+   + +S++TP  VT  ++EEA + GIK+IW+QPG ES + +    + G+   +I+ GPC+LVELGF D 
Sbjct:    7 AQINQFLSSKAFGVVGASGRRHKFGNKVLRCYLQHGKTAYPINPRESIVEGIASVETVTQLPSDVES-ISIITPAAVTERVVEEAIKKGIKNIWMQPGAESEKAIHDCNKNGI--NVIAKGPCLLVELGFIDE 136          
BLAST of EWM22681.1 vs. NCBI_GenBank
Match: gi|966464102|ref|WP_058495464.1| (CoA-binding protein [Legionella drozanskii] >gi|962202567|gb|KTC87536.1| CoA-binding protein [Legionella drozanskii LLAP-1])

HSP 1 Score: 140.584 bits (353), Expect = 1.726e-40
Identity = 64/129 (49.61%), Postives = 94/129 (72.87%), Query Frame = 0
Query:    5 KIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGF 133
            +I  F ++S++AV+GASTNREKFGNKVLRCY+QH K++ P+NPKE  IEG+  + N+  LP  T  ++S++TPP +T  ++E+A + GIK+IW+QPG ES   +    +  +   +I+ GPC+LVELGF
Sbjct:    4 QIERFFTSSAYAVIGASTNREKFGNKVLRCYLQHYKTVYPVNPKEGFIEGLVCINNIVDLPE-TVASISIITPPAITEKVVEQAIKKGIKNIWMQPGAESDTAIQNCLKNHV--NVIAKGPCILVELGF 129          
The following BLAST results are available for this feature:
BLAST of EWM22681.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103247|gb|EWM22681.1|2.939e-95100.00binding domain protein [Nannochloropsis gaditana][more]
gi|298708189|emb|CBJ30528.1|1.797e-4658.40CoA-binding domain protein [Ectocarpus siliculosus... [more]
gi|1113348253|gb|OJW12044.1|2.086e-4347.79CoA-binding protein [Legionella sp. 39-23][more]
gi|966493524|ref|WP_058510312.1|3.564e-4347.79CoA-binding protein [Legionella steelei][more]
gi|962284431|gb|KTD68197.1|3.164e-4247.79CoA-binding protein [Legionella steelei][more]
gi|966429437|ref|WP_058471558.1|4.668e-4150.77CoA-binding protein [Legionella jordanis] >gi|9622... [more]
gi|966394529|ref|WP_058440239.1|5.670e-4151.54CoA-binding protein [Legionella brunensis] >gi|962... [more]
gi|769991447|ref|WP_045107319.1|8.704e-4150.38CoA-binding protein [Legionella hackeliae][more]
gi|731150807|emb|CEK09351.1|1.256e-4050.38CoA-binding protein [Legionella hackeliae] >gi|962... [more]
gi|966464102|ref|WP_058495464.1|1.726e-4049.61CoA-binding protein [Legionella drozanskii] >gi|96... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8015rna8015Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications