EWM22692.1, cds7981 (CDS) Nannochloropsis gaditana

Overview
NameEWM22692.1
Unique Namecds7981
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:330291..330345 -
Alignment locationKK037247.1:329744..330057 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22692.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102225g1.7664.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:330291..330345 -
KK037247.1supercontigKK037247.1:329744..330057 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22692.1 vs. NCBI_GenBank
Match: gi|585103259|gb|EWM22692.1| (hypothetical protein Naga_102225g1 [Nannochloropsis gaditana])

HSP 1 Score: 243.432 bits (620), Expect = 1.794e-81
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MFKMQQQYNLPVVLIRLRGVEKIWAAEGIPSGTGLVECQMLPHAYRWPSLQAYEEGLRAVYERGEDDPLPPLPPSPPPSLATTATAAMAKVMGMLEKEAARVLEGEEEGRGGEGGAVVAPTE 122
            MFKMQQQYNLPVVLIRLRGVEKIWAAEGIPSGTGLVECQMLPHAYRWPSLQAYEEGLRAVYERGEDDPLPPLPPSPPPSLATTATAAMAKVMGMLEKEAARVLEGEEEGRGGEGGAVVAPTE
Sbjct:    1 MFKMQQQYNLPVVLIRLRGVEKIWAAEGIPSGTGLVECQMLPHAYRWPSLQAYEEGLRAVYERGEDDPLPPLPPSPPPSLATTATAAMAKVMGMLEKEAARVLEGEEEGRGGEGGAVVAPTE 122
The following BLAST results are available for this feature:
BLAST of EWM22692.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103259|gb|EWM22692.1|1.794e-81100.00hypothetical protein Naga_102225g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8003rna8003Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications