EWM22714.1, cds7959 (CDS) Nannochloropsis gaditana

Overview
NameEWM22714.1
Unique Namecds7959
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:279362..279438 -
Alignment locationKK037247.1:279170..279287 -
Alignment locationKK037247.1:278895..278903 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22714.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100639g4.5888.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:279362..279438 -
KK037247.1supercontigKK037247.1:279170..279287 -
KK037247.1supercontigKK037247.1:278895..278903 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22714.1 vs. NCBI_GenBank
Match: gi|585103291|gb|EWM22714.1| (hypothetical protein Naga_100639g4 [Nannochloropsis gaditana])

HSP 1 Score: 135.576 bits (340), Expect = 1.643e-40
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MALSDFCIDATLSGSERIGTPSCPTLSPTIQGTLGPNLVQVMALAHSEPGQATGWATLPIDLLHQLI 67
            MALSDFCIDATLSGSERIGTPSCPTLSPTIQGTLGPNLVQVMALAHSEPGQATGWATLPIDLLHQLI
Sbjct:    1 MALSDFCIDATLSGSERIGTPSCPTLSPTIQGTLGPNLVQVMALAHSEPGQATGWATLPIDLLHQLI 67
The following BLAST results are available for this feature:
BLAST of EWM22714.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103291|gb|EWM22714.1|1.643e-40100.00hypothetical protein Naga_100639g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7981rna7981Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications