rna7981, rna7981 (mRNA) Nannochloropsis gaditana

Overview
Namerna7981
Unique Namerna7981
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length730
Alignment locationKK037247.1:278895..279438 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100639g4.5888.mrna
Orig protein idgnl|cribi|Naga_100639g4.5888
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:278895..279438 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100639g4gene7728Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7981rna7981-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22714.1cds7959Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7981 ID=rna7981|Name=rna7981|organism=Nannochloropsis gaditana|type=mRNA|length=730bp
ACAGAGGGCACGTGGATGCCAGGGCTGAAATCAAGGAGACTGGCAGGAGG
ATTCCATTCCATCATCCCTGAGGGCCCTGTTCTTTCCCTTCCCCCCAGGC
GGCGCAGTGCCATCGCTTTTCTCATCGACTTGTACGTCACTCGCGCTCCC
TCTTCCTCGGTGCCCGTCTCCCCTTCCTCCCATTCTCCCCCTCCTCCTCC
TCTCGTCCCTTCCTCCCCCCCTCCGCCTCTTATATCGCCTCTATCCACGG
GCTCCTCGGAGCTTTCTCGGAACAACCCAGTCCCAGCCTGTCAACAGAAG
GCAGCTCTACTTCCCTTGGGACTGGTGGAGGCCCTGGACAGCACCATCAA
GAGCACTATTGCAGAGGCCCTCGAACTCTTCGTCCCGCCTGTTCCGGGTA
TCCCTGCGGGGCACTGGTGGTGGTGGAGTAGCGTCCAAATCGTCAATTTC
CACCAGTGCTGAGGAGAAGGCAGGAAGAAAGGGCGGTGCGAAGGCGCATT
GAAGAGGCGATGTGCGAGGAAAGATGTTGCTGGATGACCACCAGCTTTGA
ATGAAGCGTGTACGAGTAAAGTGTAATTAAATTAATAAAAGGATCACAGA
ATATACGGCAGCGATAGGAGACTGTTCGATGAGGTGAAGAGGAGATTGTT
TTCGGATGGAAAAACATGGGAACGATCTCAGAAATGAAAGAGGAAATAGA
AGAAAGAAAATCTTGCAAAATTTATCCACC
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protein sequence of rna7981

>rna7981-protein ID=rna7981-protein|Name=rna7981|organism=Nannochloropsis gaditana|type=polypeptide|length=67bp
MALSDFCIDATLSGSERIGTPSCPTLSPTIQGTLGPNLVQVMALAHSEPG
QATGWATLPIDLLHQLI
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mRNA from alignment at KK037247.1:278895..279438-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7981 ID=rna7981|Name=rna7981|organism=Nannochloropsis gaditana|type=mRNA|length=544bp|location=Sequence derived from alignment at KK037247.1:278895..279438- (Nannochloropsis gaditana)
ATGGCTTTATCAGATTTCTGTATCGATGCGACATTGAGCGGATCGGAACG
GATCGGAACGCCCTCTTGTCCTACACTGTAAGCAAAAATACCTGGCAAAA
TCCCGCCTCGAAAAGGTCGCATTTTTGTTACAGACGCATCCTTTTCCCCA
GATCTCCAACGATTCAGGGAACGTTAGGGCCAAATCTGGTGCAGGTCATG
GCGTTGGCGCATTCGGAACCAGGACAAGCGACAGGTTGGGCAACATTACC
GATAGACCTGTTGCATCAGGTACGTCTCGAGGGGCATACAAAAGAGGCAT
ACAAAAAAGATGTCTATAGGTTTAAACAGTGCATTGGTTAAAGCGTGCGT
CATGATGCATCATGTAAGATAGACGGACGGCGTGTATAGGTACTTGAATG
GCTTCGTTGGTCGCAGGACATAAAAAAGTAATGAGGGTGGAAGAAAAAAT
CGTGCAGGTCACGCGTCAGCGGGGGAACCTCCCCAGGCGTCGCAGACGAT
GATTTAATCTTGCATGTCCTCAATAGCATTGCAAGCTGATCTGA
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Coding sequence (CDS) from alignment at KK037247.1:278895..279438-

>rna7981 ID=rna7981|Name=rna7981|organism=Nannochloropsis gaditana|type=CDS|length=612bp|location=Sequence derived from alignment at KK037247.1:278895..279438- (Nannochloropsis gaditana)
CTGATCTGAATCTCCAACGATTCAGGGAACGTTAGGGCCAAATCTGGTGC
AGGTCATGGCGTTGGCGCATTCGGAACCAGGACAAGCGACAGGTTGGGCA
ACATTACCGATAGACCTGTTGCATCAGATGGCTTTATCAGATTTCTGTAT
CGATGCGACATTGAGCGGATCGGAACGGATCGGAACGCCCTCTTGTCCTA
CACTCTGATCTGAATCTCCAACGATTCAGGGAACGTTAGGGCCAAATCTG
GTGCAGGTCATGGCGTTGGCGCATTCGGAACCAGGACAAGCGACAGGTTG
GGCAACATTACCGATAGACCTGTTGCATCAGATGGCTTTATCAGATTTCT
GTATCGATGCGACATTGAGCGGATCGGAACGGATCGGAACGCCCTCTTGT
CCTACACTCTGATCTGAATCTCCAACGATTCAGGGAACGTTAGGGCCAAA
TCTGGTGCAGGTCATGGCGTTGGCGCATTCGGAACCAGGACAAGCGACAG
GTTGGGCAACATTACCGATAGACCTGTTGCATCAGATGGCTTTATCAGAT
TTCTGTATCGATGCGACATTGAGCGGATCGGAACGGATCGGAACGCCCTC
TTGTCCTACACT
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Synonyms
Publications