EWM22721.1, cds7953 (CDS) Nannochloropsis gaditana

Overview
NameEWM22721.1
Unique Namecds7953
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:267912..267919 -
Alignment locationKK037247.1:267600..267798 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22721.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101219g2.883.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:267912..267919 -
KK037247.1supercontigKK037247.1:267600..267798 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22721.1 vs. NCBI_GenBank
Match: gi|585103303|gb|EWM22721.1| (hypothetical protein Naga_101219g2 [Nannochloropsis gaditana])

HSP 1 Score: 144.821 bits (364), Expect = 4.124e-44
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 
Query:    1 MAGRYKYSYILFNGFCIGSRDNLAFNWIKHIFLQTTLKPQEVVVWPGLYHSYAITLPPPFESLSNHLR 68
            MAGRYKYSYILFNGFCIGSRDNLAFNWIKHIFLQTTLKPQEVVVWPGLYHSYAITLPPPFESLSNHLR
Sbjct:    1 MAGRYKYSYILFNGFCIGSRDNLAFNWIKHIFLQTTLKPQEVVVWPGLYHSYAITLPPPFESLSNHLR 68
The following BLAST results are available for this feature:
BLAST of EWM22721.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103303|gb|EWM22721.1|4.124e-44100.00hypothetical protein Naga_101219g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7975rna7975Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications