rna7975, rna7975 (mRNA) Nannochloropsis gaditana

Overview
Namerna7975
Unique Namerna7975
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length456
Alignment locationKK037247.1:267600..267919 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101219g2.883.mrna
Orig protein idgnl|cribi|Naga_101219g2.883
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:267600..267919 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101219g2gene7722Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7975rna7975-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22721.1cds7953Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7975 ID=rna7975|Name=rna7975|organism=Nannochloropsis gaditana|type=mRNA|length=456bp
ATGCTGGAAGAAATGCAACGACAAGAAGAAGAACAGCGACGAATGCCGGT
GGTTGTCGTCAGCCAGCATGCGAATTCAGACACAGGATCAAAGACAAAGC
CGGTGGTGATGCGGGGAAAGGATGGGGAGTTACAGTTTCCGGGGCGGGAA
GAAGGGAGTGGTGACCATGGAGGGACAGGAGCGGCGGAGTCGCTAGATTC
GTGCTTGGACGTGTTCAACGGGGCTCGATACTTTGCGGTGACGGGCATCC
TGCTCGCGTATCATGAGACAGAGGTCGAGGCGGATCCGGTGGAAAAGACG
GCGTTTGTTCGCAAGTTTAGAGAGTACGAGTTCCGCAGAGCAATGCTCGG
TGTGAGAAACCTGCCAGGATTTTGGAGGCGATTAGCCGACCTCGTATTTC
GAGGACTCACGTGGATCATCCGGGTAGTCTTTTTCGACCCCAAGCTTGCG
CGTTGA
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protein sequence of rna7975

>rna7975-protein ID=rna7975-protein|Name=rna7975|organism=Nannochloropsis gaditana|type=polypeptide|length=68bp
MAGRYKYSYILFNGFCIGSRDNLAFNWIKHIFLQTTLKPQEVVVWPGLYH
SYAITLPPPFESLSNHLR
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mRNA from alignment at KK037247.1:267600..267919-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7975 ID=rna7975|Name=rna7975|organism=Nannochloropsis gaditana|type=mRNA|length=320bp|location=Sequence derived from alignment at KK037247.1:267600..267919- (Nannochloropsis gaditana)
ATGGCAGGGTAGATAGCAGATGGGGATTGCGGAACTGACCGACACGGCCC
CCACTTGACTACCATGTAGTCCTTCTATTCCTGAGACACAGACAAATAAC
ACACACTACCACCACCCACAGCCGGTACAAGTATAGCTACATCCTTTTCA
ACGGCTTTTGCATTGGCTCGAGAGATAATCTCGCTTTCAACTGGATTAAG
CACATATTTTTGCAGACGACCTTGAAGCCGCAGGAGGTTGTAGTCTGGCC
CGGCCTCTATCACTCTTATGCAATCACACTTCCCCCCCCGTTCGAAAGTC
TTTCGAACCATCTTCGATAG
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Coding sequence (CDS) from alignment at KK037247.1:267600..267919-

>rna7975 ID=rna7975|Name=rna7975|organism=Nannochloropsis gaditana|type=CDS|length=414bp|location=Sequence derived from alignment at KK037247.1:267600..267919- (Nannochloropsis gaditana)
CCGGTACAAGTATAGCTACATCCTTTTCAACGGCTTTTGCATTGGCTCGA
GAGATAATCTCGCTTTCAACTGGATTAAGCACATATTTTTGCAGACGACC
TTGAAGCCGCAGGAGGTTGTAGTCTGGCCCGGCCTCTATCACTCTTATGC
AATCACACTTCCCCCCCCGTTCGAAAGTCTTTCGAACCATCTTCGATAGA
TGGCAGGCCGGTACAAGTATAGCTACATCCTTTTCAACGGCTTTTGCATT
GGCTCGAGAGATAATCTCGCTTTCAACTGGATTAAGCACATATTTTTGCA
GACGACCTTGAAGCCGCAGGAGGTTGTAGTCTGGCCCGGCCTCTATCACT
CTTATGCAATCACACTTCCCCCCCCGTTCGAAAGTCTTTCGAACCATCTT
CGATAGATGGCAGG
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Synonyms
Publications