EWM22725.1, cds7948 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|585103315|gb|EWM22725.1| (acetyl- carboxylase alpha [Nannochloropsis gaditana]) HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0 Query: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMAEHQGIEERIRALAQGRVAKEVASLAAVSTQGAVDGLKHVLKTLPAEHRAALLAALKE 278 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMAEHQGIEERIRALAQGRVAKEVASLAAVSTQGAVDGLKHVLKTLPAEHRAALLAALKE Sbjct: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMAEHQGIEERIRALAQGRVAKEVASLAAVSTQGAVDGLKHVLKTLPAEHRAALLAALKE 278
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|578896498|gb|AHI17199.1| (acetyl-CoA carboxylase, partial [Nannochloropsis oculata]) HSP 1 Score: 424.091 bits (1089), Expect = 1.612e-132 Identity = 218/279 (78.14%), Postives = 242/279 (86.74%), Query Frame = 0 Query: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEA--AGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMAEHQGIEERIRALAQGRVAKEVASLAAVSTQGAVDGLKHVLKTLPAEHRAALLAALK 277 MIVDALVAFAQPIFVYIPP AELRGGAWVVVDPTIH+E MEMYAAT +RGGVLEPNGAAEIKFREKDYVA AHRLD L+ MDA+M LE G+ E K L++E K+RE+ALKG+YAQVAVQFADLHDTPGRM AVGVIR+VVPW QARSFFYWRLRRRLAEFHLRKEV KA GK G + G M+LLQAS LLKSW+V+TPGK+ EGWEEDREVLGWMAEH+GIEERI+ALA+GRVA+EVA+LA S QGAV+GL HV+K LPAEHR AL+AALK Sbjct: 2082 MIVDALVAFAQPIFVYIPPHAELRGGAWVVVDPTIHSEVMEMYAATEARGGVLEPNGAAEIKFREKDYVATAHRLDRQLQGMDARMRELEGKEGGKERDAEVKALQKEIKERENALKGVYAQVAVQFADLHDTPGRMAAVGVIRQVVPWAQARSFFYWRLRRRLAEFHLRKEVFKAAGGKGGREGG-MSLLQASVLLKSWYVSTPGKTAEGWEEDREVLGWMAEHRGIEERIQALARGRVAEEVANLAGESPQGAVEGLVHVMKALPAEHREALMAALK 2359
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|397567456|gb|EJK45598.1| (hypothetical protein THAOC_35785 [Thalassiosira oceanica]) HSP 1 Score: 252.677 bits (644), Expect = 6.968e-76 Identity = 136/285 (47.72%), Postives = 189/285 (66.32%), Query Frame = 0 Query: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYA-ATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMAEH-QGIEERIRALAQGRVAKEV-------ASLAAVSTQGAVDGLKHVLKTLPAEHRAALLAAL 276 +IVDA V F QP+FVYIPP AE+RGGAWVV+D +I+ MEMYA A ++RGGVLE NGAA +K+R KD +A HRLD L+ +DA EL E EVE +E + K+RE AL +Y QVAVQF +LHDTPGRM+AVGVI + V W ++RS+FYWRLRR+LAEF LRK++L+ + G+ +T ++AS ++K WF+ TPG + W +D+ VL W+A+ Q +E +I L + V +EV + A + T G ++G+ L T+ E +A + A + Sbjct: 369 LIVDAFVKFQQPVFVYIPPHAEIRGGAWVVLDASINESVMEMYATADSARGGVLEANGAASVKYRAKDMLATMHRLDEKLKKLDA--ELQERVCEVERQE---VLDSIKEREQALLPVYEQVAVQFCELHDTPGRMQAVGVIERAVEWKESRSYFYWRLRRKLAEFDLRKKLLETY---QVGRGETITPVEASKVIKGWFLETPGATNALWNDDKAVLSWIAQQSQTLEAKIVKLNRENVVQEVFEVMTAGGNTAKIGTAGIIEGIAQALLTMSPEDQAHVRAMI 645
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|298712139|emb|CBJ33018.1| (Acetyl-CoA carboxylase [Ectocarpus siliculosus]) HSP 1 Score: 229.95 bits (585), Expect = 4.481e-72 Identity = 109/170 (64.12%), Postives = 131/170 (77.06%), Query Frame = 0 Query: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKE 170 +IVDALV + QP+FVYIPP AELRGGAWVVVD T++A MEMYAA +RGGVLE NGAA IKFR KD + AHRLDPVL +DAK+ +A EG + + + +RE + G+Y QVAVQFADLHDTPGRMEA G +RKVVPW ++RSFF+WRLRRRLAEF LR++ Sbjct: 8 LIVDALVEYKQPVFVYIPPHAELRGGAWVVVDSTVNANVMEMYAANGARGGVLEANGAASIKFRNKDLLKTAHRLDPVLMELDAKL----SACTEEGGDRRNISAALAERETRVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPWTESRSFFFWRLRRRLAEFDLRRQ 173
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|1210531177|dbj|GAX10278.1| (acetyl-CoA carboxylase / biotin carboxylase 1 [Fistulifera solaris]) HSP 1 Score: 245.358 bits (625), Expect = 3.112e-70 Identity = 130/281 (46.26%), Postives = 181/281 (64.41%), Query Frame = 0 Query: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATAS-RGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMAEHQG-IEERIRALAQGRVAKEV-------ASLAAVSTQGAVDGLKHVLKTLPAEHRAAL 272 +IVDA VA+ QP+FV+IPP AE+RGGAWVV+D +I+A MEMYAA + RGGVLE NGAA +K+R KD + HRLD L+ +D+K++ A + L+ E RE L +Y Q+AVQF +LHDTPGRM+AVGVI + V W +ARSFFYWRLRR+LAEF LR+++++A G+ G + LQA++++K WFV +P E W +D+ L WMA++ +E++I + V +EV + A V T G V+GL + + AE R L Sbjct: 2072 LIVDAFVAYTQPVFVFIPPFAEIRGGAWVVLDASINASVMEMYAAKGTARGGVLEANGAASVKYRSKDLIMTMHRLDETLKMLDSKLKSASDA------DKPSLKEEITTRERMLLPVYEQIAVQFCELHDTPGRMQAVGVIEREVEWSEARSFFYWRLRRKLAEFDLRQKIIEA--GEVGRGVKSLEPLQATSVMKQWFVESPNMKEEMWNDDKVFLSWMAQNNSFLEQKIVEFTKEVVIQEVVQVMTAGGNTARVGTTGIVEGLGRAMSLMSAEDRQNL 2344
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|223995593|ref|XP_002287470.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976586|gb|EED94913.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 244.588 bits (623), Expect = 4.830e-70 Identity = 128/267 (47.94%), Postives = 177/267 (66.29%), Query Frame = 0 Query: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYA-ATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMAEHQ-GIEERIRALAQGRVAKEVASL-------AAVSTQGAVDGLK 258 +IVDA V QP+FVYIPP AE+RGGAWVV+D +I+ MEMYA A +RGGVLE NGAA +K+R KD + HRLD L+A+DA++E V E +++ K+RE AL IY Q++VQF +LHDTPGRM+AVGVI + V W AR++FYWRLRR+LAE+ LRK++++ + G ++ ++AS L+KSWF+ TPG W++D+ VL WMA+HQ +E +I L + V +EV + A V T G V+G+ Sbjct: 1992 LIVDAFVKCQQPVFVYIPPHAEIRGGAWVVLDASINESVMEMYASAEHARGGVLEANGAATVKYRLKDMLTTMHRLDEKLKALDAELE-----ARVCESEREEVMDAIKEREQALLPIYEQISVQFCELHDTPGRMKAVGVIERAVEWKHARTYFYWRLRRKLAEYDLRKKIIET--AQVGRGTTALSPVEASKLIKSWFLKTPGAKDALWDDDKAVLSWMAQHQDDLEMKIVRLTRENVVQEVFQVMTAGGETAKVGTSGIVEGIS 2251
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|1072223370|gb|OEU08126.1| (Carboxyl_trans-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 244.588 bits (623), Expect = 5.704e-70 Identity = 127/266 (47.74%), Postives = 175/266 (65.79%), Query Frame = 0 Query: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATAS-RGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMA-EHQGIEERIRALAQGRVAKEVASL-------AAVSTQGAVDGL 257 +IVDA VA+ QP+FV+IPP AE+RGGAWVV+D +I++ MEMYA++ S RGGVLE NGAA +K+R KD + HRLD L +D +L++ + +E ++ K RE AL +Y Q++VQF +LHDTPGRMEAVGVIR+ V W ARSFFYWRLRR+LAEF LRK++ A G T L+A+ ++K WFV +PG WE+D+ +LGWM HQ +E ++ Q V++EV + A + T+G V+G+ Sbjct: 2040 LIVDAFVAYEQPVFVFIPPFAEIRGGAWVVLDASINSSVMEMYASSNSARGGVLEANGAASVKYRTKDLIKTMHRLDKTL--IDLDTQLIDGKDSLTEKEVGTIQELIKSRECALLPVYEQISVQFCELHDTPGRMEAVGVIRQQVEWKTARSFFYWRLRRKLAEFDLRKKICDASTVGRGVTNP--TPLEATDMIKQWFVQSPGMDEMKWEDDKMMLGWMGNNHQLLESKVIDYTQECVSQEVMQVMTAGGNTAKIGTRGIVEGI 2301
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|698782603|ref|XP_009824345.1| (hypothetical protein H257_02420 [Aphanomyces astaci] >gi|574120395|gb|ETV85873.1| hypothetical protein H257_02420 [Aphanomyces astaci]) HSP 1 Score: 241.506 bits (615), Expect = 6.604e-69 Identity = 127/277 (45.85%), Postives = 177/277 (63.90%), Query Frame = 0 Query: 2 IVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWM-AEHQGIEERIRALAQGRVAKEVASLAAVSTQGAVDGLKHVLKTLPAEHRAALLAALK 277 IVD LV + QP+FVYIPP AELRGGAWVVVDPTI+++ MEMYA RGGVLEP G EIK+R+ +A+AHR+D VL +DA + L AA +V + + R+ + RE L I+ Q+A F DLHDTPGRM+A VIR+VVPW QAR++FYWRL+RRL+EF +R+ +L+A +E T A + +W+ A + W D+ VL W+ ++ + +R+ +L Q R+A+EV L Q AV G+ H++ LP R ++ AL+ Sbjct: 1999 IVDGLVNYTQPVFVYIPPFAELRGGAWVVVDPTINSDVMEMYADPQGRGGVLEPAGLIEIKYRKPALLASAHRVDTVLLRLDATLATL-AADDVTRSD---VLRDIRLRESKLLPIFTQIATHFGDLHDTPGRMKAKDVIREVVPWDQARTYFYWRLKRRLSEFRVRRSILEA-----SNEEMHTTFASTEATVAAWYKAQ--QPAGDWANDQAVLAWLHSDADFLAKRLESLHQERIAREVTRLGLQDPQAAVVGILHLINQLPDSAREDVVTALR 2264
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|673020104|ref|XP_008864013.1| (hypothetical protein H310_02325 [Aphanomyces invadans] >gi|574480927|gb|ETW07920.1| hypothetical protein H310_02325 [Aphanomyces invadans]) HSP 1 Score: 241.121 bits (614), Expect = 8.819e-69 Identity = 127/277 (45.85%), Postives = 176/277 (63.54%), Query Frame = 0 Query: 2 IVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWM-AEHQGIEERIRALAQGRVAKEVASLAAVSTQGAVDGLKHVLKTLPAEHRAALLAALK 277 IVD LV + QP+FVYIPP AELRGGAWVVVDPTI+++ MEMYA RGGVLEP G EIK+R+ +A+AHR+D VL +DA + L AA +V + + R+ + RE L I+ Q+A F DLHDTPGRM+A VIR VVPW QAR++FYWRL+RRLAEF +R+ +L+A + + A + +WF A + W D+ V+ W+ A+ + + +R+ +L Q R+A+EV L Q AV G+ H++ LP R ++ AL+ Sbjct: 1997 IVDGLVHYTQPVFVYIPPFAELRGGAWVVVDPTINSDVMEMYADPQGRGGVLEPAGLIEIKYRKPALLASAHRIDSVLVRLDATLATL-AADDVTRSD---VLRDIRLRESKLLPIFTQIATHFGDLHDTPGRMKAKHVIRDVVPWDQARTYFYWRLKRRLAEFRVRRSILEA-----SNVDMHTSFASTEATVAAWFKAQ--QPAGNWANDQAVVAWLQADAEFLSKRLESLHQERIAREVTRLGLQDPQAAVVGILHLINQLPDSAREDVVTALR 2262
BLAST of EWM22725.1 vs. NCBI_GenBank
Match: gi|1210518769|dbj|GAX22315.1| (acetyl-CoA carboxylase / biotin carboxylase 1 [Fistulifera solaris]) HSP 1 Score: 240.736 bits (613), Expect = 1.073e-68 Identity = 129/278 (46.40%), Postives = 177/278 (63.67%), Query Frame = 0 Query: 1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATAS-RGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWMAEHQG-IEERIRALAQGRVAKEV-------ASLAAVSTQGAVDGLKHVLKTLPAEHR 269 +IVDA VA+ QP+FV+IPP AE+RGGAWVV+D +I+A MEMYAA + RGGVLE NGAA +K+R KD + HRLD L+ +D K+ A E ++ E RE L +Y Q+AVQF +LHDTPGRM+AVGVI + V W +AR FFYWRLRR+LAEF LR+++++A G+ G + LQA++++K WFV +P E W ED+ L WMA++ +E++I + V +EV + A V T G V+GL + + AE R Sbjct: 2073 LIVDAFVAYTQPVFVFIPPFAEIRGGAWVVLDASINASVMEMYAAKGTARGGVLEANGAASVKYRSKDLILTMHRLDETLKMLDTKLTSASDA------EKAGIKEEIMARERMLLPVYEQIAVQFCELHDTPGRMQAVGVIEREVEWSEARCFFYWRLRRKLAEFDLRQKIIEA--GEVGRGVKSLEPLQATSVMKQWFVESPNMKEEMWNEDKVFLAWMAQNNAFLEQKIVEFTKEVVIQEVVQVMTAGGNTARVGTTGIVEGLGRAMSLMSAEDR 2342 The following BLAST results are available for this feature:
BLAST of EWM22725.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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