rna7970, rna7970 (mRNA) Nannochloropsis gaditana

Overview
Namerna7970
Unique Namerna7970
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1524
Alignment locationKK037247.1:254038..255270 -

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Properties
Property NameValue
Productacetyl- carboxylase alpha
Orig transcript idgnl|cribi|Naga_101049g3.10510.mrna
Orig protein idgnl|cribi|Naga_101049g3.10510
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:254038..255270 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101049g3gene7717Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7970rna7970-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22725.1cds7948Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7970 ID=rna7970|Name=rna7970|organism=Nannochloropsis gaditana|type=mRNA|length=1524bp
GGATTCAGCGCAAGGCGGACCTCAAACCTCTTCCCTCAATTTCTCTTTCC
AGGTGCATGGCCAACAACGGATCGGAACGCTTTCCTCCCAACGCGCGCCT
GGTCTTTGTCCACGGGCATCGGATGGAGGGCCCGAGGGAGGGGGTGCCGG
TGGGGGAGGTCGAGGCAGGGGCGGAGTTCAACGTGGCGCTTCCCCTCACG
ACGCCCACGGTTCCCGACCGTTACGTCGGTTACTGGCAGTTGGAAGCGCA
TGGGCCTCGCGGGGAGCGGGTGGAGCTGGGGCATCGGATTTGGATTGACG
TGGTGGTGGAGGAGAAAGAGGAGGGGTGGGAGTTGGTGCGAGCGACACGA
GAGGAGGGGGGCCAGGGAGAAAGGGAGGAGGGAGCGAGGGCGATGGGAGG
CGAAGAAGGAGAGGAAATGGGGGAGGATGATGGTGACGAGGAGGAAAAGG
TTGAAGATGACGGGGAAGACGAATCCCTGTTGGAGACGGCAGCGGCAGCC
ACCCTCGCTTCCTCCTTCCCTTCCCCTCTCGCTTCCTCCCTCCCGGGCTC
GCAAGACTGGTCAAAATGGACCCCTCAACTGGAGCTCTTGGCCGCCATGG
GCTTCGAGACGCGCCTGGATGAATGCGTAGTGCTCATGGAAAAAATCTGG
AAGGAGGAAGGGGAGGAGGGAGGGGTGGGAGGGGCTGCGCCCGCCTCCTC
CTCCTCGGGTGGTGCTCCTCCTTGTTCGCCTTCGTCCGATCCCTCCTTGA
TAGAGGGTGGGGAAAGGCGAAGCGAGAGAGCGAAGGCGTGGGGGGAAGAG
GAAAAACTGCAGGCGGTAGTAGAAGCCTTGCTAGGGAGGGACTCTGAGGA
GGGACGCCGTCGGTAGACAAGATGGCGAGGAAGAAGGACGGGAAGTTCGG
AGGGGTGGTGTACGGTGACACGCAGAAATGCTGCTTATCATGAGAGCCTT
TCCTAAAAGATAGAGGGCTCAGGACTGAAGGGCTTCGTCTCCAAGCCAAT
CGCTCTTACTTTCATCCAGCACCGGGTAACGCGTATGTTAGCTTGAGTAT
GTAATTCGGAAGATAAATTCATGGAAGAGACGAAGGGCAAAAAAGAAATA
CGGCCAAAAGAAAAAAAATGCGTGTAATTAGAAGGTGTCGCAGGGGATCG
TAATTTCAACGATGAATTCTCGCTCTCAGAAAGGGTCAAGAGCTGTTGGA
CAAAGCAGATGGAAAGGAAGAAGAATAGCGAGGAGAAGGAGAGCAATACT
TGAGGCGCAGAGAAGGCTTATGAAAGCGAAAGCATGAAAACAAGTTGGAA
AAGACATGACCGATAAGAAGGGGGGAAGTTTTAAGTAGATACGTGTTTGC
TCGAGAATGTTGACGAGGGAAAGATATTGCGGACAAAAGAGGTACAACTT
CACACGGGATTCTAGAAACCATGAACAAGGACCTTGCTCACGGGGCCTTT
AAAAACAGAAGAAATCCGCCGTTTATTGGAACTTGAATTGTTCAAGATGG
TGGGTATTATCGCATGAATTTTCC
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protein sequence of rna7970

>rna7970-protein ID=rna7970-protein|Name=rna7970|organism=Nannochloropsis gaditana|type=polypeptide|length=278bp
MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRG
GVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEG
KQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQA
RSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEGGMTLLQASALLKSWFV
ATPGKSTEGWEEDREVLGWMAEHQGIEERIRALAQGRVAKEVASLAAVST
QGAVDGLKHVLKTLPAEHRAALLAALKE
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mRNA from alignment at KK037247.1:254038..255270-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7970 ID=rna7970|Name=rna7970|organism=Nannochloropsis gaditana|type=mRNA|length=1233bp|location=Sequence derived from alignment at KK037247.1:254038..255270- (Nannochloropsis gaditana)
GCCCTCGGAGTCGCGTCCTTCCGTCGTCCTTTTCCTCCCTTGGCTTTTTT
CCCACCACACCGCCTTCTCCTCCCTCCCCCCCCCCTTTCTTTCCTGCACA
GAGGTGCTCAAGTTCGGGAGCATGATCGTGGACGCCCTCGTCGCTTTCGC
GCAGCCCATCTTCGTCTACATCCCCCCCCAGGCCGAGCTCCGGGGCGGGG
CCTGGGTGGTGGTCGATCCCACCATACACGCCGAGGCGATGGAGATGTAC
GCAGCGACGGCCTCCCGGGGAGGGGTCCTGGAGCCCAACGGAGCGGCGGA
GATCAAGTTCAGGGAGAAGGACTACGTGGCGGCGGCGCATCGCTTGGACC
CAGTCTTGCGGGCGATGGACGCGAAGATGGAGCTCTTGGAGGCGGCGGGG
GAGGTGGAGGGGGAAGAAGGAAAGCAGCTGCGAAGGGAGAGGAAGGACCG
GGAGGTGAGTGAAGGGGCAGACGGGGCAATGGGAGGTATCTCTCCTCTGG
CGCGAAGGTCTGTGTGGTTGCGCGGATCTGTCTTTCGATGCGGTGCTCAT
CGTGGATGGAGGGGTTTGAAATTGACTATGCAGCCTTGTTTTCTTCTTTG
AATTCTTTCCGGTGTGTATCTATCGACCGGGCTGCGCGACACTCACGTCT
GCTTTCCCTGTATGTGTCCACTCTCTGTTTAGGACGCTCTCAAAGGCATC
TACGCCCAAGTGGCGGTGCAATTTGCCGACTTGCACGACACGCCGGGGCG
GATGGAGGCCGTCGGGGTCATTCGAAAGGTGGTGCCCTGGGGCCAGGCCC
GCTCCTTCTTCTACTGGCGCCTGCGCCGTCGTTTGGCCGAATTCCACCTC
CGCAAGGAAGTGTTGAAAGCCGTGGATGGGAAGGAAGGGGGGAAGGAGGG
CGGAATGACCTTGTTGCAGGCGTCCGCTCTCCTCAAGAGCTGGTTCGTCG
CCACCCCGGGAAAATCCACGGAGGGCTGGGAGGAGGACAGGGAGGTCTTG
GGGTGGATGGCGGAACATCAGGGGATCGAGGAGCGGATTCGGGCGCTGGC
CCAGGGGCGGGTGGCGAAGGAAGTGGCTTCGCTGGCCGCGGTGAGCACGC
AGGGCGCGGTGGATGGGCTCAAGCATGTCCTTAAGACGCTCCCGGCGGAG
CACCGGGCGGCGCTACTGGCGGCATTGAAGGAGTAGGAAGGAGGCGGGAG
AAGAAGCTTAGAGGAAAAGTCGGAAAGGGGGGG
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Coding sequence (CDS) from alignment at KK037247.1:254038..255270-

>rna7970 ID=rna7970|Name=rna7970|organism=Nannochloropsis gaditana|type=CDS|length=1674bp|location=Sequence derived from alignment at KK037247.1:254038..255270- (Nannochloropsis gaditana)
GACGCTCTCAAAGGCATCTACGCCCAAGTGGCGGTGCAATTTGCCGACTT
GCACGACACGCCGGGGCGGATGGAGGCCGTCGGGGTCATTCGAAAGGTGG
TGCCCTGGGGCCAGGCCCGCTCCTTCTTCTACTGGCGCCTGCGCCGTCGT
TTGGCCGAATTCCACCTCCGCAAGGAAGTGTTGAAAGCCGTGGATGGGAA
GGAAGGGGGGAAGGAGGGCGGAATGACCTTGTTGCAGGCGTCCGCTCTCC
TCAAGAGCTGGTTCGTCGCCACCCCGGGAAAATCCACGGAGGGCTGGGAG
GAGGACAGGGAGGTCTTGGGGTGGATGGCGGAACATCAGGGGATCGAGGA
GCGGATTCGGGCGCTGGCCCAGGGGCGGGTGGCGAAGGAAGTGGCTTCGC
TGGCCGCGGTGAGCACGCAGGGCGCGGTGGATGGGCTCAAGCATGTCCTT
AAGACGCTCCCGGCGGAGCACCGGGCGGCGCTACTGGCGGCATTGAAGGA
GTAGATGATCGTGGACGCCCTCGTCGCTTTCGCGCAGCCCATCTTCGTCT
ACATCCCCCCCCAGGCCGAGCTCCGGGGCGGGGCCTGGGTGGTGGTCGAT
CCCACCATACACGCCGAGGCGATGGAGATGTACGCAGCGACGGCCTCCCG
GGGAGGGGTCCTGGAGCCCAACGGAGCGGCGGAGATCAAGTTCAGGGAGA
AGGACTACGTGGCGGCGGCGCATCGCTTGGACCCAGTCTTGCGGGCGATG
GACGCGAAGATGGAGCTCTTGGAGGCGGCGGGGGAGGTGGAGGGGGAAGA
AGGAAAGCAGCTGCGAAGGGAGAGGAAGGACCGGGAGGACGCTCTCAAAG
GCATCTACGCCCAAGTGGCGGTGCAATTTGCCGACTTGCACGACACGCCG
GGGCGGATGGAGGCCGTCGGGGTCATTCGAAAGGTGGTGCCCTGGGGCCA
GGCCCGCTCCTTCTTCTACTGGCGCCTGCGCCGTCGTTTGGCCGAATTCC
ACCTCCGCAAGGAAGTGTTGAAAGCCGTGGATGGGAAGGAAGGGGGGAAG
GAGGGCGGAATGACCTTGTTGCAGGCGTCCGCTCTCCTCAAGAGCTGGTT
CGTCGCCACCCCGGGAAAATCCACGGAGGGCTGGGAGGAGGACAGGGAGG
TCTTGGGGTGGATGGCGGAACATCAGGGGATCGAGGAGCGGATTCGGGCG
CTGGCCCAGGGGCGGGTGGCGAAGGAAGTGGCTTCGCTGGCCGCGGTGAG
CACGCAGGGCGCGGTGGATGGGCTCAAGCATGTCCTTAAGACGCTCCCGG
CGGAGCACCGGGCGGCGCTACTGGCGGCATTGAAGGAGTAGATGATCGTG
GACGCCCTCGTCGCTTTCGCGCAGCCCATCTTCGTCTACATCCCCCCCCA
GGCCGAGCTCCGGGGCGGGGCCTGGGTGGTGGTCGATCCCACCATACACG
CCGAGGCGATGGAGATGTACGCAGCGACGGCCTCCCGGGGAGGGGTCCTG
GAGCCCAACGGAGCGGCGGAGATCAAGTTCAGGGAGAAGGACTACGTGGC
GGCGGCGCATCGCTTGGACCCAGTCTTGCGGGCGATGGACGCGAAGATGG
AGCTCTTGGAGGCGGCGGGGGAGGTGGAGGGGGAAGAAGGAAAGCAGCTG
CGAAGGGAGAGGAAGGACCGGGAG
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Synonyms
Publications