EWM22748.1, cds7921 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22748.1 vs. NCBI_GenBank
Match: gi|585103347|gb|EWM22748.1| (hypothetical protein Naga_100143g3 [Nannochloropsis gaditana]) HSP 1 Score: 1117.06 bits (2888), Expect = 0.000e+0 Identity = 542/542 (100.00%), Postives = 542/542 (100.00%), Query Frame = 0 Query: 1 MSSPARGHVENMLADQTEGSDDNWLRDFREMKQSILMSPAGTSSTGFPSPARRISEVDPAAVNGDHLDQEIKSIVDILQDEDAANKKLNIGSSHHPVIGGKEKAIKGPYDRLTGCAPAASPLSSSSSSSSESSRASSPESTPSPGHGGFKNSSSHESSCYSPNAYQILRSEQPLAPPFIDDPTEDNRKPSYTDMHRTTNYQELHQAQPSWAPETQHEESSLARPPSDIASGNLLRMLYEEKERGQGQKARIQGLEVALAETTQEKEVAMASARLEIHELRGMLRRVASESTFSDVFTLYEAHIARVEKEANVLRDRNVHLEAWRLDQRQQSEESRGQGRADACGGEGDSQGCNRPDRPTPSPSRKNRKSLYGATKPAPHNAQDTFWSPTSALSTAMRMNGSQPAPTGVLVALKGKVKELQRQVNDLKQETGELRRRERQFLVQKRMVETTWARVQKVQFMAKGLESSLASSRLDGARAEARLEEAEGEIRALRQREAVLVMDRDRCLQELEVIRRQLGGVGNARGSAFSKGTHGRERDCPRR 542 MSSPARGHVENMLADQTEGSDDNWLRDFREMKQSILMSPAGTSSTGFPSPARRISEVDPAAVNGDHLDQEIKSIVDILQDEDAANKKLNIGSSHHPVIGGKEKAIKGPYDRLTGCAPAASPLSSSSSSSSESSRASSPESTPSPGHGGFKNSSSHESSCYSPNAYQILRSEQPLAPPFIDDPTEDNRKPSYTDMHRTTNYQELHQAQPSWAPETQHEESSLARPPSDIASGNLLRMLYEEKERGQGQKARIQGLEVALAETTQEKEVAMASARLEIHELRGMLRRVASESTFSDVFTLYEAHIARVEKEANVLRDRNVHLEAWRLDQRQQSEESRGQGRADACGGEGDSQGCNRPDRPTPSPSRKNRKSLYGATKPAPHNAQDTFWSPTSALSTAMRMNGSQPAPTGVLVALKGKVKELQRQVNDLKQETGELRRRERQFLVQKRMVETTWARVQKVQFMAKGLESSLASSRLDGARAEARLEEAEGEIRALRQREAVLVMDRDRCLQELEVIRRQLGGVGNARGSAFSKGTHGRERDCPRR Sbjct: 1 MSSPARGHVENMLADQTEGSDDNWLRDFREMKQSILMSPAGTSSTGFPSPARRISEVDPAAVNGDHLDQEIKSIVDILQDEDAANKKLNIGSSHHPVIGGKEKAIKGPYDRLTGCAPAASPLSSSSSSSSESSRASSPESTPSPGHGGFKNSSSHESSCYSPNAYQILRSEQPLAPPFIDDPTEDNRKPSYTDMHRTTNYQELHQAQPSWAPETQHEESSLARPPSDIASGNLLRMLYEEKERGQGQKARIQGLEVALAETTQEKEVAMASARLEIHELRGMLRRVASESTFSDVFTLYEAHIARVEKEANVLRDRNVHLEAWRLDQRQQSEESRGQGRADACGGEGDSQGCNRPDRPTPSPSRKNRKSLYGATKPAPHNAQDTFWSPTSALSTAMRMNGSQPAPTGVLVALKGKVKELQRQVNDLKQETGELRRRERQFLVQKRMVETTWARVQKVQFMAKGLESSLASSRLDGARAEARLEEAEGEIRALRQREAVLVMDRDRCLQELEVIRRQLGGVGNARGSAFSKGTHGRERDCPRR 542
BLAST of EWM22748.1 vs. NCBI_GenBank
Match: gi|553191332|ref|XP_005855363.1| (hypothetical protein NGA_2048100, partial [Nannochloropsis gaditana CCMP526] >gi|422293697|gb|EKU20997.1| hypothetical protein NGA_2048100, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 422.165 bits (1084), Expect = 5.213e-144 Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0 Query: 178 FIDDPTEDNRKPSYTDMHRTTNYQELHQAQPSWAPETQHEESSLARPPSDIASGNLLRMLYEEKERGQGQKARIQGLEVALAETTQEKEVAMASARLEIHELRGMLRRVASESTFSDVFTLYEAHIARVEKEANVLRDRNVHLEAWRLDQRQQSEESRGQGRADACGGEGDSQGCNRPDRPTPSPSRKNRKSLYGATKPAPHNAQD 383 F DDPTEDNRKPSYTDMHRTTNYQELHQA PSWAPETQHEESSLARPPSDIASGNLLRMLYEEKERGQGQKARIQGLEVALAETTQEKEVAMASARLEIHELRGMLRRVASESTFSDVFTLYEAHIARVEKEANVLRDRNVHLEAWRLDQRQQSEESRGQGRADACGGEGDSQGCNRPDRPTPSPSRKNRKSL+GATKPAPHNAQD Sbjct: 1 FNDDPTEDNRKPSYTDMHRTTNYQELHQAPPSWAPETQHEESSLARPPSDIASGNLLRMLYEEKERGQGQKARIQGLEVALAETTQEKEVAMASARLEIHELRGMLRRVASESTFSDVFTLYEAHIARVEKEANVLRDRNVHLEAWRLDQRQQSEESRGQGRADACGGEGDSQGCNRPDRPTPSPSRKNRKSLHGATKPAPHNAQD 206
BLAST of EWM22748.1 vs. NCBI_GenBank
Match: gi|298714566|emb|CBJ27557.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.7962 bits (190), Expect = 2.994e-11 Identity = 81/321 (25.23%), Postives = 135/321 (42.06%), Query Frame = 0 Query: 233 LLRMLYEEKERGQGQKARIQGLEVALAETTQEKEVAMASARLEIHELRGMLRRVASESTFSDVFTLYEAHIARVEKEANVLRDRNVHLEAWRLDQ-RQQSEESRGQG-----------------------------RADACG---GEGDSQGCNRPDRPTPSPSRKNRKSLYGATKPAPHN--AQDTFWSPTSALSTAMR--MNGSQPAPTGVLVALKGKVKELQRQVNDLKQETGELRRRERQFLVQKRMVETTWARVQKVQFMAKGLESSLASSRLDGARAEARLEEAEGEIRALRQREAVLVMDRDRCLQELEVIRRQ 516 LLR++ E+++RG+ R + E E E + R E E RG LRR S ++VF YEAH +E E LRD+N+ LE LD RQ + + G RA A G G DS+ C + +P ++ S + D P+ ++ A + +G P VL L+ ++KE + + ++ E + +R+R Q R ++ +++++ + E L +SRL+ ARAE E+ E+ L +A LV +R+ + L R++ Sbjct: 1322 LLRVVREQEDRGKQMIRRFEAKECDWLERVTTLEADLEGLRAEAVETRGRLRRAEESSPSAEVFERYEAHTGILEAENTSLRDQNISLELRLLDTLRQSTTTASSTGRTTVATETNSHLSLSGCQQHRHHAALVSTRATATGEKEGNQDSEICPKQHKPGTGALQQAEASAKACVDGGATSRFRVDGRVPPSGSVGEAGKPWPSGGTPMCAAVLKDLRRRLKEAELEAKKMRAERAGMDKRDRLCQAQLRTLKEQRSKLREFLLREREHEVKLTASRLESARAEVIAEDKAAEVEHLLDNQAALVAEREDLVLALAEERKK 1642 The following BLAST results are available for this feature:
BLAST of EWM22748.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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