EWM22817.1, cds7856 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|585103444|gb|EWM22817.1| (SDA1 family protein [Nannochloropsis gaditana]) HSP 1 Score: 644.81 bits (1662), Expect = 0.000e+0 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0 Query: 1 MSLGESGEEEDEEGLEDDWEEVEEEEEEEEEEEEEEWIDVSSASENGEEEAGEGKEGVEDGEEEDGSEEEEEEEEVKGRGFGGNTMGGEEVNREETVGSEKGEGEEAVRNSLTPTPPFPSTPVQSKRLKRAAKREAAHAARLQRQEKRASAALTSLIRPAGTDVMKRVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRRC 336 MSLGESGEEEDEEGLEDDWEEVEEEEEEEEEEEEEEWIDVSSASENGEEEAGEGKEGVEDGEEEDGSEEEEEEEEVKGRGFGGNTMGGEEVNREETVGSEKGEGEEAVRNSLTPTPPFPSTPVQSKRLKRAAKREAAHAARLQRQEKRASAALTSLIRPAGTDVMKRVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRRC Sbjct: 1 MSLGESGEEEDEEGLEDDWEEVEEEEEEEEEEEEEEWIDVSSASENGEEEAGEGKEGVEDGEEEDGSEEEEEEEEVKGRGFGGNTMGGEEVNREETVGSEKGEGEEAVRNSLTPTPPFPSTPVQSKRLKRAAKREAAHAARLQRQEKRASAALTSLIRPAGTDVMKRVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRRC 336
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|299470894|emb|CBN78843.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.9745 bits (232), Expect = 1.743e-17 Identity = 65/172 (37.79%), Postives = 98/172 (56.98%), Query Frame = 0 Query: 166 KRVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLR--PEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRR 335 +RV++ R+LS EDF +I++L+ + A K+ KR ++ + E+ GG EG P LEGY+KRRRA+ EERL ++ G+ F+ HAGGLTNAEK+RKKNY+M+RKGK V K R +++ A+K +G K + +R +K++R Sbjct: 616 QRVDSTRILSAEDFEKIKKLKHQAATA---------------------AKQRTHKRKHNIGGSDSEDSDDGGEEGQSFSVDPRALEGYRKRRRATLEERLEGVIRGREKFQANSHAGGLTNAEKERKKNYLMIRKGKA-VKHKTRMGEKQVMAQKNRGGKVQMSRNKQKKKR 765
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|1214711793|gb|OWZ22777.1| (hypothetical protein PHMEG_0002449 [Phytophthora megakarya]) HSP 1 Score: 80.8777 bits (198), Expect = 4.450e-13 Identity = 55/169 (32.54%), Postives = 92/169 (54.44%), Query Frame = 0 Query: 167 RVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRR 335 R++A+R+L+ DF +I L+K + A +DP+ R+ RK EE+ G + + P DLEGY K++R ++EERL ++ G+ F+H GG TN EKKR K++MM++K K V SK+ + ++ +++K + K +A+KRR+ Sbjct: 555 RLDARRILTPLDFERIEMLKKERDAALKDPKS-----------------RSKRK--------AEEDAAKAGSDATKVNPTDLEGYSKKKRMTQEERLRVVLEGREDFKHKRSGGGTTNTEKKRLKHFMMIKKSK-SVQSKVLVSARQVQSQKNRVVKKILKHDAKKRRK 697
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|635370744|emb|CCI41007.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 80.1073 bits (196), Expect = 6.524e-13 Identity = 59/172 (34.30%), Postives = 90/172 (52.33%), Query Frame = 0 Query: 167 RVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQ---QEQKARKVKGKKSEFAREARKRRR 335 R++A+R+L+ DF +I L+K E RDP+ R + R + E E +G + P DLEGY K+RR ++EERL I+ G+ F+H +GG TN EKKR K++MM++K +R V SK+ + Q K R VK + ++ +KRR+ Sbjct: 565 RIDARRILTALDFERIEILKKERAETSRDPK--------------------NRSKKRQ-QTNENEHALGSNA----VTPNDLEGYTKKRRLTQEERLRSILKGREDFQHKRSSGGTTNTEKKRLKHFMMIKKSRR-VQSKVLKSAREIQHTKNRLVKKQITKL----KKRRK 706
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|806069124|gb|AKB91759.1| (SDA1 [Phytophthora capsici]) HSP 1 Score: 78.1814 bits (191), Expect = 3.114e-12 Identity = 55/176 (31.25%), Postives = 92/176 (52.27%), Query Frame = 0 Query: 160 AGTDVMKRVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRR 335 A D R++A+R+L+ DF +I L+K + A +DP+ R+ RK EE+ + + P DLEGY K++R ++EERL ++ G+ ++H GG TN EKKR K++MM++K K V SK+ + ++ + +K + K +A+KRR+ Sbjct: 550 AAIDQKDRLDARRILTPLDFERIEMLKKERDAALKDPKS-----------------RSKRK--------AEEDAAKASSDATKVNPTDLEGYSKKKRMTQEERLRVVLEGREDYKHKRSGGGTTNTEKKRLKHFMMIKKSK-SVQSKVLVSARQIQNQKNRVVKKILKHDAKKRRK 699
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|1173950036|gb|OQR98020.1| (SDA1 family protein [Achlya hypogyna]) HSP 1 Score: 77.411 bits (189), Expect = 5.394e-12 Identity = 59/170 (34.71%), Postives = 90/170 (52.94%), Query Frame = 0 Query: 166 KRVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRR 335 +R++AQR+L+ +DF +I L+K EA +DP+ A RKR EE E++ + + P LEGY K++R ++EERL ++ G+ F H GG TN EK R KN++M++K R V SK+ + +E + K K R+A+KRRR Sbjct: 555 QRIDAQRILTPKDFERIELLKKEAAEAAKDPK-------------------ARRKRK---AEEVEKKALEAN--FAKVDPSTLEGYAKKKRQTQEERLRSVLEGRENFLHRKSGGGTTNREKARLKNFLMLKKS-RKVQSKVLKSTREIQHLANKTVKKVLKRDAKKRRR 699
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|675187851|ref|XP_008902810.1| (hypothetical protein PPTG_09551 [Phytophthora parasitica INRA-310] >gi|566028266|gb|ETI51177.1| hypothetical protein F443_05378 [Phytophthora parasitica P1569] >gi|567965624|gb|ETK91094.1| hypothetical protein L915_05235 [Phytophthora parasitica] >gi|567994308|gb|ETL44467.1| hypothetical protein L916_05190 [Phytophthora parasitica] >gi|568023575|gb|ETL97630.1| hypothetical protein L917_05075 [Phytophthora parasitica] >gi|568053983|gb|ETM50789.1| hypothetical protein L914_05191 [Phytophthora parasitica] >gi|568097140|gb|ETN11884.1| hypothetical protein PPTG_09551 [Phytophthora parasitica INRA-310] >gi|570955867|gb|ETP20940.1| hypothetical protein F441_05385 [Phytophthora parasitica CJ01A1] >gi|570991043|gb|ETP48894.1| hypothetical protein F442_05428 [Phytophthora parasitica P10297] >gi|970643638|gb|KUF84808.1| SDA1 protein [Phytophthora nicotianae] >gi|970656009|gb|KUF94080.1| hypothetical protein AM588_10006958 [Phytophthora nicotianae]) HSP 1 Score: 77.411 bits (189), Expect = 5.650e-12 Identity = 54/169 (31.95%), Postives = 90/169 (53.25%), Query Frame = 0 Query: 167 RVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRR 335 R++A+R+L+ DF +I L+K + A +DP+ R+ RK EE+ + + P DLEGY K++R ++EERL ++ G+ F+H GG TN EKKR K++MM++K K V SK+ + ++ + +K + K +A+KRR+ Sbjct: 558 RLDARRILTPLDFERIEMLKKERDAALKDPKS-----------------RSKRK--------AEEDAAKASSDATKVNPTDLEGYSKKKRMTQEERLRVVLEGREDFKHKRSGGGTTNTEKKRLKHFMMIKKSK-SVQSKVLVSARQVQRQKNRVVKKILKHDAKKRRK 700
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|570331971|gb|ETO79919.1| (hypothetical protein F444_05423 [Phytophthora parasitica P1976]) HSP 1 Score: 77.411 bits (189), Expect = 6.248e-12 Identity = 54/169 (31.95%), Postives = 90/169 (53.25%), Query Frame = 0 Query: 167 RVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRR 335 R++A+R+L+ DF +I L+K + A +DP+ R+ RK EE+ + + P DLEGY K++R ++EERL ++ G+ F+H GG TN EKKR K++MM++K K V SK+ + ++ + +K + K +A+KRR+ Sbjct: 558 RLDARRILTPLDFERIEMLKKERDAALKDPKS-----------------RSKRK--------AEEDAAKASSDATKVNPTDLEGYSKKKRMTQEERLRVVLEGREDFKHKRSGGGTTNTEKKRLKHFMMIKKSK-SVQSKVLVSARQVQRQKNRVVKKILKHDAKKRRK 700
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|698798212|ref|XP_009832135.1| (hypothetical protein H257_08060 [Aphanomyces astaci] >gi|574113063|gb|ETV78554.1| hypothetical protein H257_08060 [Aphanomyces astaci]) HSP 1 Score: 76.6406 bits (187), Expect = 1.079e-11 Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 0 Query: 167 RVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQ--QEQKARKVKGKKSEFAREARKRRR 335 RV+A+R+L+ +DF +I+ L+K A +DP+ A RKR D E++ E + P LEGY K++R + EERL ++ G+ F H GG TN EK R KN++M++K + L+ T+ Q K R VKG R+A+KRRR Sbjct: 567 RVDARRILTPKDFERIQMLKKEAVNAAKDPK-------------------ARRKRKADAVEKKALES-----NHSTVDPATLEGYSKKKRQTMEERLRSVLEGRENFNHKQKGGGTTNREKARLKNFLMLKKSLQVQSKVLKSTREIQHIKNRVVKGVTK---RDAKKRRR 710
BLAST of EWM22817.1 vs. NCBI_GenBank
Match: gi|953491793|emb|CEG45802.1| (protein sda1 homolog isoform x1 [Plasmopara halstedii]) HSP 1 Score: 76.2554 bits (186), Expect = 1.216e-11 Identity = 54/169 (31.95%), Postives = 90/169 (53.25%), Query Frame = 0 Query: 167 RVEAQRVLSTEDFAQIRRLQKRFEEAKRDPRQVRGGGKTGKTEQVLLVKRAGRKRGRDVEEEEEEEGVGGGREGGMLRPEDLEGYKKRRRASKEERLMKIVSGKNTFEHAGHAGGLTNAEKKRKKNYMMVRKGKRDVFSKLRDTQQEQKARKVKGKKSEFAREARKRRR 335 R++A+R+L+ DF +I L+K + A +DP+ R+ RK EE+ + + P DLEGY K++R ++EERL ++ G+ F+H GG TN EKKR K++MM++K K V SK+ + ++ + +K + K +A+KRR+ Sbjct: 555 RLDARRILTPLDFERIEMLKKERDAALKDPKS-----------------RSKRK--------AEEDAAKASSDATKVNPVDLEGYTKKKRMTQEERLRLVLEGREDFKHKRSGGGTTNTEKKRLKHFMMIKKSKA-VQSKVLVSARQVQRQKNRVVKKILKHDAKKRRK 697 The following BLAST results are available for this feature:
BLAST of EWM22817.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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