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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100375g2.1524.mrna |
| Orig protein id | gnl|cribi|Naga_100375g2.1524 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002475.1 | supercontig | CM002475.1:36687..38499 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7872 ID=rna7872|Name=rna7872|organism=Nannochloropsis gaditana|type=mRNA|length=669bp
ATGATCTTCCCCATCGTCCTCCCTGCCTCCAACGTCACCTTTCCTGTGGC
CGTCCCGCCTCGGCTCCTGGAAGAGCACTTGGTCTCACGAGCAGACAGTT
TGCACGCCCTCGGCTCCCAGTCCTTGCAGTCCCTCCGCCCAGGTCAGCTC
CTCCTCCACTCTCTCGCACGACCCCTCTCCCCGGCGCAGAGCATGCAGCT
TTCCTCCTTGGGCCGTCTTACCCACGAGCGCCATTTCAATACCCGGAAGT
TCAAGCGCGACGAGATGTACATCCCAGGCGGTCTGGTGCTGGGCTTGACG
CTCTCAGCCTCAGCCCGAGACCTGCACGAGGTCCTGCACGAGGAGGTGAT
CGAATGCGCCTTCATCAACCACCTGCACCCCTGGGACATCGTGTCTTCCT
TCTCCTACATCAAGGAGATGGATGAGAACATCACAGGCGATTTGGAAGCG
CTGACGCTCCGCACGATTGGCGTCAAGAATGTAGACGTGCACCTGGATCT
GCTCGACCAGGCCTTTCCCCTCGCCCTTTTCACTACCCCGTCCCTGCGGA
CGAAGCACATGGAGGCCCTCTGCAAGGCGCACATCCCAGAGCTGAGCAAG
AAGATTGTGTGCGTGGTGGAAAGACGGATACTGCGACAAAGCCCCAAGAC
CGAGGCGTTCTTGTTGTAG back to topprotein sequence of rna7872 >rna7872-protein ID=rna7872-protein|Name=rna7872|organism=Nannochloropsis gaditana|type=polypeptide|length=382bp
MINALIFRLRGRLSLVLTTTTSRIERRRLCFPVRGYPRTLTTLGSPDDRK
IYPPSTSSVPPTPGRPTGGDPLKDLKKVHGSFISSPSTISHREEVMRAEA
SSFLHVLEEHDPSAPCPMCINGDAGTCSSLETRDEAVDEAYEQAEGPEGS
EIDREERKSIVQARARDMDDERTPCVIQEQHRLQEQLEDESQSVKEDEST
CLVESKEVRTSQAGGHFRRAGQLRVTREPGPSDDTEMLKTAGYGSQGARE
SGKGYGDVFWEGGTPMFLTEDKARDMFEHGVAGPTDAAKIREGEIGRLAE
LTCDETQGSLDQKEVHSKILRALKEEGEMDSLRRTNHPGGQLANERFTRS
KANRVSDKDTEKQAMDKGGLAKGRTDEEPRSS back to topmRNA from alignment at CM002475.1:36687..38499- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7872 ID=rna7872|Name=rna7872|organism=Nannochloropsis gaditana|type=mRNA|length=1813bp|location=Sequence derived from alignment at CM002475.1:36687..38499- (Nannochloropsis gaditana)
AGGCACATAAAAAAGTGCGGCCCGTGTCACGTCCGGCATCACATCCCAAT
TTGACGGCGCTCAAGGTATACAAGGGGCCTCGATTGTGCGCGGAACGAGG
ATTATTACCACTCCATTTCACGGCTTGCGCATGGGCTTTCGTTCGTAACC
CTTGCATCACAGTGATGTTCACCTGATTCTTGACAGACAGCTTGAAGCTT
TCAGAACACCTCGTGATTGCTCCTCACCTGTTCTCACCAACAACAGTTCA
TAAGGTATTTTAAAATCGCGATGATTAATGCTCTCATCTTCCGACTGCGT
GGCCGCTTGTCGCTCGTCCTGACAACTACGACGTCTCGTATAGAGCGGCG
GCGCCTATGCTTTCCTGTACGAGGTTACCCCCGCACGCTCACGACTCTGG
GGAGTCCAGACGACCGGAAAATATATCCACCTTCTACTTCTAGTGTTCCT
CCTACACCAGGGCGCCCTACCGGTGGTGATCCGCTAAAAGACCTGAAGAA
AGTCCACGGCTCCTTTATATCTTCACCTTCAACTATCTCTCATCGAGAAG
AGGTCATGCGGGCTGAAGCCTCTTCTTTCCTCCACGTTTTGGAAGAACAC
GACCCCTCGGCGCCTTGTCCCATGTGTATAAATGGAGACGCGGGCACGTG
CTCCAGCCTTGAGACGCGTGATGAGGCGGTGGACGAGGCGTACGAGCAGG
CGGAAGGTCCTGAGGGCTCCGAGATAGACCGGGAGGAGCGGAAGAGCATA
GTCCAGGCCCGGGCTCGCGACATGGACGACGAAAGGACTCCTTGTGTCAT
TCAAGAGCAGCACCGATTGCAAGAGCAACTCGAGGACGAATCGCAGAGCG
TCAAGGAAGACGAATCGACGTGTTTGGTTGAATCTAAGGAGGTGCGCACT
TCTCAAGCAGGGGGCCACTTCCGACGTGCGGGGCAGCTGCGTGTGACGCG
AGAACCCGGTCCTAGCGATGATACAGAGATGCTGAAAACGGCTGGCTATG
GGTCGCAGGGGGCGCGTGAGAGTGGGAAAGGTTATGGAGACGTCTTTTGG
GAGGGAGGAACTCCAATGTTTTTGACGGAAGACAAAGCCAGAGACATGTT
TGAACACGGAGTAGCGGGGCCGACGGATGCGGCAAAAATCAGGGAGGGTG
AGATTGGTAGGCTAGCCGAGCTCACATGCGATGAGACGCAGGGCTCTCTT
GACCAAAAAGAAGTGCACAGCAAAATTCTGCGCGCATTGAAAGAGGAGGG
AGAGATGGATTCCTTGCGACGTACCAATCACCCCGGAGGACAGCTTGCAA
ACGAGCGTTTCACGCGGTCCAAAGCGAATAGAGTAAGCGACAAGGACACG
GAGAAGCAGGCGATGGATAAGGGTGGCCTAGCAAAAGGCAGAACGGATGA
AGAACCCAGATCGTCGTGAATGTGGAGGAAAAAGTACACGACACGGTGAA
GCTGTGAGGTACTCGGGCGAGGCAGGAATGATTGATTTAAAGATAATGAC
CTGATGAGGCTCATGAATATAATGTGTCCAGCTGCGAAAGAATGCAATAT
CGGCGTTTAGAGAGGCGACCAAAAATTGGTTGACTATTACAAAATCGATA
CATCCTGCGCATGTCTTTTTACTCTGTGTTGAAAGAAACAATCTGAGGCG
AATCGCTAAAAATCATCTAGAGCACGAATGAAGTATCTGCGACCCTGCAC
GATGCAATCCACGAAAGCTACAGCGCACAAGTTGGACAAGCACCTAAAGT
TCTCAAGCCCAGCGCACTTTCAAGAAACGTAAAAGCAACGCAGTGTAGCA
GGCAGGTAATAAT back to topCoding sequence (CDS) from alignment at CM002475.1:36687..38499- >rna7872 ID=rna7872|Name=rna7872|organism=Nannochloropsis gaditana|type=CDS|length=1149bp|location=Sequence derived from alignment at CM002475.1:36687..38499- (Nannochloropsis gaditana)
ATGATTAATGCTCTCATCTTCCGACTGCGTGGCCGCTTGTCGCTCGTCCT
GACAACTACGACGTCTCGTATAGAGCGGCGGCGCCTATGCTTTCCTGTAC
GAGGTTACCCCCGCACGCTCACGACTCTGGGGAGTCCAGACGACCGGAAA
ATATATCCACCTTCTACTTCTAGTGTTCCTCCTACACCAGGGCGCCCTAC
CGGTGGTGATCCGCTAAAAGACCTGAAGAAAGTCCACGGCTCCTTTATAT
CTTCACCTTCAACTATCTCTCATCGAGAAGAGGTCATGCGGGCTGAAGCC
TCTTCTTTCCTCCACGTTTTGGAAGAACACGACCCCTCGGCGCCTTGTCC
CATGTGTATAAATGGAGACGCGGGCACGTGCTCCAGCCTTGAGACGCGTG
ATGAGGCGGTGGACGAGGCGTACGAGCAGGCGGAAGGTCCTGAGGGCTCC
GAGATAGACCGGGAGGAGCGGAAGAGCATAGTCCAGGCCCGGGCTCGCGA
CATGGACGACGAAAGGACTCCTTGTGTCATTCAAGAGCAGCACCGATTGC
AAGAGCAACTCGAGGACGAATCGCAGAGCGTCAAGGAAGACGAATCGACG
TGTTTGGTTGAATCTAAGGAGGTGCGCACTTCTCAAGCAGGGGGCCACTT
CCGACGTGCGGGGCAGCTGCGTGTGACGCGAGAACCCGGTCCTAGCGATG
ATACAGAGATGCTGAAAACGGCTGGCTATGGGTCGCAGGGGGCGCGTGAG
AGTGGGAAAGGTTATGGAGACGTCTTTTGGGAGGGAGGAACTCCAATGTT
TTTGACGGAAGACAAAGCCAGAGACATGTTTGAACACGGAGTAGCGGGGC
CGACGGATGCGGCAAAAATCAGGGAGGGTGAGATTGGTAGGCTAGCCGAG
CTCACATGCGATGAGACGCAGGGCTCTCTTGACCAAAAAGAAGTGCACAG
CAAAATTCTGCGCGCATTGAAAGAGGAGGGAGAGATGGATTCCTTGCGAC
GTACCAATCACCCCGGAGGACAGCTTGCAAACGAGCGTTTCACGCGGTCC
AAAGCGAATAGAGTAAGCGACAAGGACACGGAGAAGCAGGCGATGGATAA
GGGTGGCCTAGCAAAAGGCAGAACGGATGAAGAACCCAGATCGTCGTGA back to top
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