EWM22830.1, cds7844 (CDS) Nannochloropsis gaditana

Overview
NameEWM22830.1
Unique Namecds7844
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002475.1:22378..22575 -
Alignment locationCM002475.1:22129..22251 -
Alignment locationCM002475.1:21697..21870 -
Alignment locationCM002475.1:21321..21501 -
Alignment locationCM002475.1:21039..21117 -
Alignment locationCM002475.1:20490..20838 -

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Properties
Property NameValue
Protein idEWM22830.1
ProductRAP domain protein
Orig transcript idgnl|cribi|Naga_100733g3.5912.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002475.1supercontigCM002475.1:22378..22575 -
CM002475.1supercontigCM002475.1:22129..22251 -
CM002475.1supercontigCM002475.1:21697..21870 -
CM002475.1supercontigCM002475.1:21321..21501 -
CM002475.1supercontigCM002475.1:21039..21117 -
CM002475.1supercontigCM002475.1:20490..20838 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR013584RAP
IPR003034SAP_dom
Homology
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BLAST of EWM22830.1 vs. NCBI_GenBank
Match: gi|585103465|gb|EWM22830.1| (RAP domain protein [Nannochloropsis gaditana])

HSP 1 Score: 736.873 bits (1901), Expect = 0.000e+0
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0 
Query:    1 MGPPVEAEGLFRRLLGSAIARLGSPSTSLSAASSAGSSLAGKGRAVDCEDGDCNVVPVHALRQLRQVARFVEVVLGWEGVEMAVGGSPEADKLDEPEQPTASSLLHMEVDDGVYVQDIVLMPKAAGGLGAKHSLPPPLPVIVEVDGPPHFFNNVPRRSRGDHKLKARILEAQTGKKNGGVVSVTWWEWVCRTRRQRTRMMVRKLVEVGVTDPSLYLRGVAALSSEEEGEEENEEFVEALSFEGEDDEGEWMSYSDDENDEDSEAAAGGLIQAKARSLLQQKQERPQSMIIWGREDGGHVYNAPSSARLSLEGLGARIESDEESFLWSLTVPELKAKLREKCLPVSGVKAALVSRLMDILEAVEEGGK 367
            MGPPVEAEGLFRRLLGSAIARLGSPSTSLSAASSAGSSLAGKGRAVDCEDGDCNVVPVHALRQLRQVARFVEVVLGWEGVEMAVGGSPEADKLDEPEQPTASSLLHMEVDDGVYVQDIVLMPKAAGGLGAKHSLPPPLPVIVEVDGPPHFFNNVPRRSRGDHKLKARILEAQTGKKNGGVVSVTWWEWVCRTRRQRTRMMVRKLVEVGVTDPSLYLRGVAALSSEEEGEEENEEFVEALSFEGEDDEGEWMSYSDDENDEDSEAAAGGLIQAKARSLLQQKQERPQSMIIWGREDGGHVYNAPSSARLSLEGLGARIESDEESFLWSLTVPELKAKLREKCLPVSGVKAALVSRLMDILEAVEEGGK
Sbjct:    1 MGPPVEAEGLFRRLLGSAIARLGSPSTSLSAASSAGSSLAGKGRAVDCEDGDCNVVPVHALRQLRQVARFVEVVLGWEGVEMAVGGSPEADKLDEPEQPTASSLLHMEVDDGVYVQDIVLMPKAAGGLGAKHSLPPPLPVIVEVDGPPHFFNNVPRRSRGDHKLKARILEAQTGKKNGGVVSVTWWEWVCRTRRQRTRMMVRKLVEVGVTDPSLYLRGVAALSSEEEGEEENEEFVEALSFEGEDDEGEWMSYSDDENDEDSEAAAGGLIQAKARSLLQQKQERPQSMIIWGREDGGHVYNAPSSARLSLEGLGARIESDEESFLWSLTVPELKAKLREKCLPVSGVKAALVSRLMDILEAVEEGGK 367
The following BLAST results are available for this feature:
BLAST of EWM22830.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103465|gb|EWM22830.1|0.000e+0100.00RAP domain protein [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7866rna7866Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications