EWM22868.1, cds7804 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|585103517|gb|EWM22868.1| (phosphatidate cytidylyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 Query: 1 MSPPALSSSSLDSNFPTVSSFLTAKVLPGSSHDARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRLTAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVASSFTSACFVLYSSRQGWTIDDGGRHGRKGMERVWRRVWGSTLLSAAAETLPVPEGWDNLMVFGAALLADWLVMRGARTSV 301 MSPPALSSSSLDSNFPTVSSFLTAKVLPGSSHDARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRLTAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVASSFTSACFVLYSSRQGWTIDDGGRHGRKGMERVWRRVWGSTLLSAAAETLPVPEGWDNLMVFGAALLADWLVMRGARTSV Sbjct: 1 MSPPALSSSSLDSNFPTVSSFLTAKVLPGSSHDARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRLTAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVASSFTSACFVLYSSRQGWTIDDGGRHGRKGMERVWRRVWGSTLLSAAAETLPVPEGWDNLMVFGAALLADWLVMRGARTSV 301
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|1172434829|ref|WP_080810670.1| (phosphatidate cytidylyltransferase [Halomicronema hongdechloris] >gi|1209462912|gb|ASC71251.1| Phytol kinase [Halomicronema hongdechloris C2206]) HSP 1 Score: 148.673 bits (374), Expect = 8.503e-40 Identity = 80/192 (41.67%), Postives = 112/192 (58.33%), Query Frame = 0 Query: 32 HDARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRL-TAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVAS 222 D A L+T + +S+ + + LA R + T +RKL+HIG GP+F+LCWPLFS A Y+AA PL T+ F +GLG +V+ A V+SM+R QE+LRGPL+YG VM+I T+LFWR+ L + +C GDG AD+VGR++ GR ++P+ P KSW G+ VAS Sbjct: 7 QDGLATLVTFVLALSWLKLMDGLAYRGLLQQTLSRKLIHIGTGPLFILCWPLFSDQGGARYWAALVPLTFTAKFLAIGLGWLVDAAAVQSMTRNNQPQEILRGPLYYGVVMVICTVLFWRQSPLGILALMMMCGGDGLADIVGRRW-----------------------GRHKLPFSPEKSWAGSTAMFVAS 175
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|551575073|ref|XP_005773265.1| (hypothetical protein EMIHUDRAFT_369009 [Emiliania huxleyi CCMP1516] >gi|485624863|gb|EOD20836.1| hypothetical protein EMIHUDRAFT_369009 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 144.821 bits (364), Expect = 2.094e-38 Identity = 80/182 (43.96%), Postives = 103/182 (56.59%), Query Frame = 0 Query: 33 DARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRLTAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIG 214 D A L S M EG+K+LA + +T RKL+H+ GP+F+L WP F PS++ +AA P +T+ F +VG G+I A VK MSRTG R+ELLRGPL YG+V AT+L +R TA + LCAGDG ADV+GR+F RR K +PW P KSW G Sbjct: 9 DGVAFLAASATMAVLVEGLKVLAKAGVYPTTFTRKLLHMAAGPVFILTWPWFGKQPSSAVWAAAVPACMTAKFALVGAGLIQQDADVKLMSRTGDRRELLRGPLLYGAVFCAATVLGFRSATAGGALMALCAGDGMADVIGRRFG----------------RRHK------LPWSPQKSWAG 168
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|551568685|ref|XP_005770298.1| (hypothetical protein EMIHUDRAFT_436338 [Emiliania huxleyi CCMP1516] >gi|485621425|gb|EOD17869.1| hypothetical protein EMIHUDRAFT_436338 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 144.821 bits (364), Expect = 2.419e-38 Identity = 80/182 (43.96%), Postives = 103/182 (56.59%), Query Frame = 0 Query: 33 DARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRLTAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIG 214 D A L S M EG+K+LA + +T RKL+H+ GP+F+L WP F PS++ +AA P +T+ F +VG G+I A VK MSRTG R+ELLRGPL YG+V AT+L +R TA + LCAGDG ADV+GR+F RR K +PW P KSW G Sbjct: 10 DGVAFLAASATMAVLVEGLKVLAKAGVYPTTFTRKLLHMAAGPVFILTWPWFGKQPSSAVWAAAVPACMTAKFALVGAGLIQQDADVKLMSRTGDRRELLRGPLLYGAVFCAATVLGFRSATAGGALMALCAGDGMADVIGRRFG----------------RRHK------LPWSPQKSWAG 169
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|470484807|ref|XP_004344106.1| (phytol kinase 2, putative [Acanthamoeba castellanii str. Neff] >gi|440799659|gb|ELR20703.1| phytol kinase 2, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 142.895 bits (359), Expect = 1.160e-37 Identity = 87/248 (35.08%), Postives = 129/248 (52.02%), Query Frame = 0 Query: 40 TSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRLTAALCI-SCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVASSFTSACFVLYSSRQGWTIDDGGRHGRKGMERVWRRVWGSTLLSAAAETLPVPEGWDNLMVFGAA 286 T++ + + + ++ L R + ++ RK +H+G GP+F+LCW F A Y+AA P +T F ++GLG++ + TV+S+SRTG R ELL+GPL YG + ++ T ++WR + + I LCAGDGFAD+ GRK+ G R+P SKSW G+ F VAS + QGW R G+ + + TL+S E+LPV + WDNL V AA Sbjct: 12 TTVVALLWLKAMETLRDRGVLSANACRKWIHVGTGPLFILCWLAFPQDAQARYWAAVVPGLITLRFALLGLGVLKDEKTVRSLSRTGDRTELLKGPLIYGIIFVVCTCVYWRDSSVGISILLILCAGDGFADLAGRKYG----------------------GAARLPHNRSKSWAGSCAFFVASLAFQCAYAHLFHAQGWL--------RVGLAQSLPTIVAVTLVSTVVESLPVSD-WDNLTVSLAA 228
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|1084513919|gb|OGN76041.1| (phosphatidate cytidylyltransferase [Chloroflexi bacterium GWB2_54_36]) HSP 1 Score: 142.51 bits (358), Expect = 1.396e-37 Identity = 92/251 (36.65%), Postives = 133/251 (52.99%), Query Frame = 0 Query: 33 DARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFW-RRLTAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVASSFTSACFVLYSSRQGWTIDDGGRHGRKGMERVWRRVWGSTLLSAAAETLPVPEGWDNLMV 282 D AL++T +A + + LA R I +S +RK++HIG GPIF+LCW LF+S PSA + AA PL +T F +VG+GII + A V +M+RTG R+ELLRGPL+YG V ++ T+ FW + + LC GDGF DV+G++ A +PW P K+W G++ +V F + VL Q D + R+ +++ AA E+LPV + DNL V Sbjct: 5 DLLALVITLVAALVWLRLNDFLAHRGIISSALSRKIIHIGTGPIFVLCWLLFTSAPSARFVAAIVPLGITLQFFMVGVGIIKDKAAVDAMARTGDRRELLRGPLYYGIVFVVLTVTFWLDSPVGIIALMVLCGGDGFGDVIGKRIASRA-----------------------LPWSPRKTWAGSLAVLVG-GFVFSLLVLTVFIQFGVFD-------LTQGELVPRLLLISVVCAAVESLPVRD-LDNLTV 223
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|1084576068|gb|OGO32294.1| (phosphatidate cytidylyltransferase [Chloroflexi bacterium RBG_16_54_18]) HSP 1 Score: 140.198 bits (352), Expect = 9.939e-37 Identity = 73/186 (39.25%), Postives = 109/186 (58.60%), Query Frame = 0 Query: 36 ALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRL-TAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIV 220 ALL+T +++ A R +S +RKL+HIG GP+F+LCW LF+S P + + AA PL T F ++GLGII + A+V++MSRTG R+E+L+GP++YG V ++ TLL+W + + +C GDG AD+ GR+F GR ++PW P KSW G++G +V Sbjct: 8 ALLITFAVALTWLRINDFAAQRGWISSRLSRKLIHIGTGPLFVLCWLLFTSAPLSRFLAALVPLLFTLQFVLIGLGIIKDEASVQAMSRTGDRREILKGPVYYGLVFVVMTLLYWLESPIGMVALMLMCGGDGLADITGRRF-----------------------GRRKLPWNPDKSWAGSLGMLV 170
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|1084582003|gb|OGO37812.1| (phosphatidate cytidylyltransferase [Chloroflexi bacterium RBG_16_57_11]) HSP 1 Score: 139.043 bits (349), Expect = 3.160e-36 Identity = 75/207 (36.23%), Postives = 119/207 (57.49%), Query Frame = 0 Query: 36 ALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRL-TAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVA----SSFTSACFVLYSSRQG 237 AL++T A + + + A R S +RK++HIG GP+F++CW LF+ +P++ Y AA PL++T+ F +VGLG+I + + V++MSRTG R+E+LRGPL+YG + ++ T+L+W T + + +C GDG AD++GR+ YG K +PW KSW+G++ F + + A FVL QG Sbjct: 8 ALIITFSAALIWLRLMDFAAHRGWVDSQLSRKIIHIGTGPLFVVCWLLFTDVPTSRYLAALVPLSITAQFALVGLGVIKDQSAVEAMSRTGDRREILRGPLYYGIIFVVVTVLYWLETPTGIVALMLVCGGDGMADIIGRR-------YGIRK----------------LPWNRKKSWMGSLWFFIGGWLLTMLILAVFVLAGVFQG 191
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|971517804|dbj|GAQ80394.1| (phosphatidate cytidyltransferase [Klebsormidium nitens]) HSP 1 Score: 140.198 bits (352), Expect = 5.381e-36 Identity = 82/227 (36.12%), Postives = 120/227 (52.86%), Query Frame = 0 Query: 7 SSSSLDSNFPTVSSFLTAKVLPGSSHDARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWRRL-TAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVGFIVASSFTSACFVLY 232 S+S+ + V S L+ + D A + V++ + V N+ +RK++HIG GPIFLL W LFS P A YFAA PL +T+ F ++G+G+I +P V SMSR G ELLRGPL+YG V +++T++FWR L +S LC GDG A+V+GRK+ GR ++PW SKS++GT + S +++Y Sbjct: 34 SASACEQRADVVDSPLSPYFTSSTGVDITAASIALFICVAWLKSVDAAVYFNLLDMRLSRKMIHIGTGPIFLLTWNLFSDAPEARYFAAVVPLLVTAQFFLIGVGVINDPQAVASMSRRGDPSELLRGPLYYGIVFVVSTVVFWRSSPLGVLALSVLCGGDGLAEVLGRKY-----------------------GRVKLPWSRSKSYVGTAAMFLGSFLFGFGYLVY 237
BLAST of EWM22868.1 vs. NCBI_GenBank
Match: gi|501115251|ref|WP_012164598.1| (phosphatidate cytidylyltransferase [Acaryochloris marina] >gi|158307653|gb|ABW29270.1| phosphatidate cytidylyltransferase [Acaryochloris marina MBIC11017]) HSP 1 Score: 137.117 bits (344), Expect = 2.310e-35 Identity = 75/201 (37.31%), Postives = 112/201 (55.72%), Query Frame = 0 Query: 32 HDARALLLTSLAMVSYAEGVKLLATRNICASTTARKLMHIGCGPIFLLCWPLFSSLPSASYFAAGAPLALTSFFTIVGLGIIVNPATVKSMSRTGARQELLRGPLFYGSVMIIATLLFWR-RLTAALCISCLCAGDGFADVVGRKFAPAVPSYGFEKKQDDLLRRQKTLGRGRIPWCPSKSWIGTVG-----FIVASSFTS 226 D+ +++T + +S+ + LA I +RK++H+G GP+F+LCWP FS P+A YFAA PLA+T F +G+G I +P V++M+RTG +E+L+GPLFYG V ++ T+ FWR L + +C GDG AD+VGR+ LG ++P+ P KSW G+ F+ A SF S Sbjct: 13 QDSVVMVITLMLALSWLRIMDALAANGILEQKLSRKIIHMGTGPLFVLCWPFFSPQPTACYFAALVPLAITLQFIGIGVGWIQDPDAVQAMTRTGNPKEILKGPLFYGLVFVVCTIGFWRTSPVGMLALMMMCGGDGLADIVGRR-----------------------LGVHKLPFSPEKSWAGSAAMFAGSFLFAFSFLS 190 The following BLAST results are available for this feature:
BLAST of EWM22868.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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