EWM22882.1, cds7792 (CDS) Nannochloropsis gaditana

Overview
NameEWM22882.1
Unique Namecds7792
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:39150..39329 +
Alignment locationCM002474.1:39492..39605 +
Alignment locationCM002474.1:39750..39917 +
Alignment locationCM002474.1:40057..40154 +
Alignment locationCM002474.1:40204..40213 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22882.1
Product26s protease regulatory subunit 7
Orig transcript idgnl|cribi|Naga_100788g1.10001.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:39150..39329 +
CM002474.1supercontigCM002474.1:39492..39605 +
CM002474.1supercontigCM002474.1:39750..39917 +
CM002474.1supercontigCM002474.1:40057..40154 +
CM002474.1supercontigCM002474.1:40204..40213 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0019538protein metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|585103539|gb|EWM22882.1| (26s protease regulatory subunit 7 [Nannochloropsis gaditana])

HSP 1 Score: 379.793 bits (974), Expect = 3.215e-133
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 
Query:    1 MASEAGACQTRNVGNYDDDEEEEKEIPPLDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDAAL 189
            MASEAGACQTRNVGNYDDDEEEEKEIPPLDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDAAL
Sbjct:    1 MASEAGACQTRNVGNYDDDEEEEKEIPPLDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDAAL 189
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|553187677|ref|XP_005854656.1| (26s protease regulatory subunit 7, partial [Nannochloropsis gaditana CCMP526] >gi|422294401|gb|EKU21701.1| 26s protease regulatory subunit 7, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 371.318 bits (952), Expect = 1.655e-129
Identity = 187/192 (97.40%), Postives = 187/192 (97.40%), Query Frame = 0 
Query:    1 MASEAGACQTRNVGNYDDDEEEEKEIPPLDEGDIALLKTYGLGPYTTSIKKREEDIKNLQ-----EKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            MASEAGACQTRNVGNYDDDEEEEKEIPPLDEGDIALLKTYGLGPYTTSIKKREEDIKNLQ     EKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA
Sbjct:    1 MASEAGACQTRNVGNYDDDEEEEKEIPPLDEGDIALLKTYGLGPYTTSIKKREEDIKNLQVRVKEEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 192
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|1173931018|gb|OQR83598.1| (26S protease regulatory subunit 7 [Achlya hypogyna])

HSP 1 Score: 300.056 bits (767), Expect = 3.908e-98
Identity = 148/184 (80.43%), Postives = 166/184 (90.22%), Query Frame = 0 
Query:    6 GACQTRNVGNYDDDEEEEKEIPP--LDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            G CQT+N  +YD+ EEE  E P   LDEGDIALLKTYGLGPYT +IK  E+DIK +Q+ V +L+GIKESD+GLSLPSQWDLVSDKQMMQEEQPLQVARCTKIIN G+DDAKY+INVKQIAKFVVGLG+KV+PTDIEEGMRVGVDRTKY+IQIPLPPKIDPTVSLMTVEDKPDVTYD+VGG K++
Sbjct:    5 GECQTKNTKDYDN-EEELNEAPTKVLDEGDIALLKTYGLGPYTRAIKSVEDDIKKVQQSVNDLVGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEDDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGCKES 187
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|675192947|ref|XP_008905358.1| (26S protease regulatory subunit 7 [Phytophthora parasitica INRA-310] >gi|566024263|gb|ETI47174.1| 26S protease regulatory subunit 7 [Phytophthora parasitica P1569] >gi|567961587|gb|ETK87127.1| 26S protease regulatory subunit 7 [Phytophthora parasitica] >gi|567990318|gb|ETL40550.1| 26S protease regulatory subunit 7 [Phytophthora parasitica] >gi|568019542|gb|ETL93686.1| 26S protease regulatory subunit 7 [Phytophthora parasitica] >gi|568049958|gb|ETM46924.1| 26S protease regulatory subunit 7 [Phytophthora parasitica] >gi|568094749|gb|ETN09525.1| 26S protease regulatory subunit 7 [Phytophthora parasitica INRA-310] >gi|570327907|gb|ETO75855.1| 26S protease regulatory subunit 7 [Phytophthora parasitica P1976] >gi|570951694|gb|ETP16951.1| 26S protease regulatory subunit 7 [Phytophthora parasitica CJ01A1] >gi|970650780|gb|KUF89732.1| 26S protease regulatory subunit 7 [Phytophthora nicotianae])

HSP 1 Score: 299.286 bits (765), Expect = 6.879e-98
Identity = 149/185 (80.54%), Postives = 166/185 (89.73%), Query Frame = 0 
Query:    5 AGACQTRNVGNYDDDEEEEKEIPP--LDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            AG CQT N  +YD++E++    P   LDEGDIALLKTYGLGPY+  IK+ EEDIK  Q+ V +LIGIKESD+GLSLPSQWDLVSDKQMMQEEQPLQVARCTKIIN G++DAKY+INVKQIAKFVVGLG+KV+PTDIEEGMRVGVDRTKY+IQIPLPPKIDPTVSLMTVEDKPDVTYD+VGGAKDA
Sbjct:    3 AGECQTSNTKDYDNEEDDLLAGPETVLDEGDIALLKTYGLGPYSRVIKQVEEDIKKAQKAVNDLIGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEEDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKDA 187
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|301107227|ref|XP_002902696.1| (26S protease regulatory subunit 7 [Phytophthora infestans T30-4] >gi|262098570|gb|EEY56622.1| 26S protease regulatory subunit 7 [Phytophthora infestans T30-4])

HSP 1 Score: 298.516 bits (763), Expect = 1.251e-97
Identity = 149/185 (80.54%), Postives = 166/185 (89.73%), Query Frame = 0 
Query:    5 AGACQTRNVGNYDDDEEEEKEIPP--LDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            AG CQT N  +YD++E++    P   LDEGDIALLKTYGLGPY+  IK+ EEDIK  Q+ V +LIGIKESD+GLSLPSQWDLVSDKQMMQEEQPLQVARCTKIIN G++DAKY+INVKQIAKFVVGLG+KV+PTDIEEGMRVGVDRTKY+IQIPLPPKIDPTVSLMTVEDKPDVTYD+VGGAKDA
Sbjct:    3 AGECQTGNTKDYDNEEDDLLAGPETVLDEGDIALLKTYGLGPYSRVIKQVEEDIKKAQKAVNDLIGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEEDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKDA 187
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|570985886|gb|ETP45047.1| (26S protease regulatory subunit 7, partial [Phytophthora parasitica P10297])

HSP 1 Score: 299.671 bits (766), Expect = 1.392e-97
Identity = 149/185 (80.54%), Postives = 166/185 (89.73%), Query Frame = 0 
Query:    5 AGACQTRNVGNYDDDEEEEKEIPP--LDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            AG CQT N  +YD++E++    P   LDEGDIALLKTYGLGPY+  IK+ EEDIK  Q+ V +LIGIKESD+GLSLPSQWDLVSDKQMMQEEQPLQVARCTKIIN G++DAKY+INVKQIAKFVVGLG+KV+PTDIEEGMRVGVDRTKY+IQIPLPPKIDPTVSLMTVEDKPDVTYD+VGGAKDA
Sbjct:   38 AGECQTSNTKDYDNEEDDLLAGPETVLDEGDIALLKTYGLGPYSRVIKQVEEDIKKAQKAVNDLIGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEEDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKDA 222
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|813165182|ref|XP_012203651.1| (26S protease regulatory subunit 7 [Saprolegnia parasitica CBS 223.65] >gi|641531551|gb|KDO25618.1| 26S protease regulatory subunit 7 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 298.13 bits (762), Expect = 1.933e-97
Identity = 147/184 (79.89%), Postives = 166/184 (90.22%), Query Frame = 0 
Query:    6 GACQTRNVGNYDDDEEEEKEIPP--LDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            G CQT+N  +YD+ E+E  E P   LDEGDIALLKTYGLGPYT +IK  E+DIK +Q+ V +L+GIKESD+GLSLPSQWDLVSDKQMMQEEQPLQVARCTKIIN G+DDAKY+INVKQIAKFVVGLG+KV+PTDIEEGMRVGVDRTKY+IQIPLPPKIDPTVSLMTVEDKPDVTYD+VGG K++
Sbjct:    5 GECQTKNTKDYDN-EDELNEAPSKVLDEGDIALLKTYGLGPYTRAIKSVEDDIKKVQQSVNDLVGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEDDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGCKES 187
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|698821475|ref|XP_009843766.1| (26S protease regulatory subunit 7 [Aphanomyces astaci] >gi|574101223|gb|ETV66790.1| 26S protease regulatory subunit 7 [Aphanomyces astaci])

HSP 1 Score: 298.13 bits (762), Expect = 1.981e-97
Identity = 146/185 (78.92%), Postives = 167/185 (90.27%), Query Frame = 0 
Query:    6 GACQTRNVGNYDDDEEEEKEIPP---LDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            G CQT+NV  YD+++E  +  PP   LDEGDIALLKTYGLGPY+ SIK  E+DIK +Q+ V +L+GIKESD+GLS+PSQWDLVSDKQM+QEEQPLQVARCTKIIN G+DDAKY+INVKQIAKFVVGLG+KV+PTDIEEGMRVGVDRTKY+IQIPLPPKIDPTVSLMTVEDKPDVTYD+VGG KD+
Sbjct:    4 GECQTKNVNEYDNEDELNE--PPSKILDEGDIALLKTYGLGPYSRSIKSVEDDIKKVQQSVNDLVGIKESDTGLSIPSQWDLVSDKQMLQEEQPLQVARCTKIINAGEDDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGCKDS 186
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|695406647|ref|XP_009524164.1| (hypothetical protein PHYSODRAFT_285612 [Phytophthora sojae] >gi|348681631|gb|EGZ21447.1| hypothetical protein PHYSODRAFT_285612 [Phytophthora sojae])

HSP 1 Score: 297.745 bits (761), Expect = 2.890e-97
Identity = 148/185 (80.00%), Postives = 166/185 (89.73%), Query Frame = 0 
Query:    5 AGACQTRNVGNYDDDEEEEKEIPP--LDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            AG CQT N  +YD++E++    P   LDEGDIALLKTYGLGPY+  IK+ E+DIK  Q+ V +LIGIKESD+GLSLPSQWDLVSDKQMMQEEQPLQVARCTKIIN G++DAKY+INVKQIAKFVVGLG+KV+PTDIEEGMRVGVDRTKY+IQIPLPPKIDPTVSLMTVEDKPDVTYD+VGGAKDA
Sbjct:    3 AGECQTSNTKDYDNEEDDLLAGPETVLDEGDIALLKTYGLGPYSRVIKQVEDDIKKAQKAVNDLIGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEEDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKDA 187
[Close]
BLAST of EWM22882.1 vs. NCBI_GenBank
Match: gi|669146232|ref|XP_008608678.1| (26S protease regulatory subunit 7 [Saprolegnia diclina VS20] >gi|530739503|gb|EQC37745.1| 26S protease regulatory subunit 7 [Saprolegnia diclina VS20])

HSP 1 Score: 296.975 bits (759), Expect = 5.198e-97
Identity = 147/184 (79.89%), Postives = 165/184 (89.67%), Query Frame = 0 
Query:    6 GACQTRNVGNYDDDEEEEKEIPP--LDEGDIALLKTYGLGPYTTSIKKREEDIKNLQEKVKELIGIKESDSGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINPGQDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKDA 187
            G CQT N  +YD+ E+E  E P   LDEGDIALLKTYGLGPYT +IK  E+DIK +Q+ V +L+GIKESD+GLSLPSQWDLVSDKQMMQEEQPLQVARCTKIIN G+DDAKY+INVKQIAKFVVGLG+KV+PTDIEEGMRVGVDRTKY+IQIPLPPKIDPTVSLMTVEDKPDVTYD+VGG K++
Sbjct:    5 GECQTTNTKDYDN-EDELNEAPSKVLDEGDIALLKTYGLGPYTRAIKSVEDDIKKVQQSVNDLVGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEDDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGCKES 187
The following BLAST results are available for this feature:
BLAST of EWM22882.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103539|gb|EWM22882.1|3.215e-133100.0026s protease regulatory subunit 7 [Nannochloropsis... [more]
gi|553187677|ref|XP_005854656.1|1.655e-12997.4026s protease regulatory subunit 7, partial [Nannoc... [more]
gi|1173931018|gb|OQR83598.1|3.908e-9880.4326S protease regulatory subunit 7 [Achlya hypogyna... [more]
gi|675192947|ref|XP_008905358.1|6.879e-9880.5426S protease regulatory subunit 7 [Phytophthora pa... [more]
gi|301107227|ref|XP_002902696.1|1.251e-9780.5426S protease regulatory subunit 7 [Phytophthora in... [more]
gi|570985886|gb|ETP45047.1|1.392e-9780.5426S protease regulatory subunit 7, partial [Phytop... [more]
gi|813165182|ref|XP_012203651.1|1.933e-9779.8926S protease regulatory subunit 7 [Saprolegnia par... [more]
gi|698821475|ref|XP_009843766.1|1.981e-9778.9226S protease regulatory subunit 7 [Aphanomyces ast... [more]
gi|695406647|ref|XP_009524164.1|2.890e-9780.00hypothetical protein PHYSODRAFT_285612 [Phytophtho... [more]
gi|669146232|ref|XP_008608678.1|5.198e-9779.8926S protease regulatory subunit 7 [Saprolegnia dic... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7813rna7813Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications