EWM22884.1, cds7782 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|585103542|gb|EWM22884.1| (ubiquitin carboxyl-terminal hydrolase 31 [Nannochloropsis gaditana]) HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0 Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0 Query: 1 MAGPQSPAGTRDAREESGAVKGHEDTRGEKGKGSSGRGEGGLQGNGGLSVAAVGNSPSPTAGTKPKSRAGRCDGGDGLRMGDHIGGGDGGLLRAGNAQGEKVDETGDVSKDKGLEEPGEKQEPLTGCAEIASASPSSSSPPSGTISSSHTPPAASPSSLPSSEGLDTSSTSLPRPVRRPSLRLPTPSPSVLDELTLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRGWSPKAG 413 MAGPQSPAGTRDAREESGAVKGHEDTRGEKGKGSSGRGEGGLQGNGGLSVAAVGNSPSPTAGTKPKSRAGRCDGGDGLRMGDHIGGGDGGLLRAGNAQGEKVDETGDVSKDKGLEEPGEKQEPLTGCAEIASASPSSSSPPSGTISSSHTPPAASPSSLPSSEGLDTSSTSLPRPVRRPSLRLPTPSPSVLDELTLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRGWSPKAG Sbjct: 1 MAGPQSPAGTRDAREESGAVKGHEDTRGEKGKGSSGRGEGGLQGNGGLSVAAVGNSPSPTAGTKPKSRAGRCDGGDGLRMGDHIGGGDGGLLRAGNAQGEKVDETGDVSKDKGLEEPGEKQEPLTGCAEIASASPSSSSPPSGTISSSHTPPAASPSSLPSSEGLDTSSTSLPRPVRRPSLRLPTPSPSVLDELTLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRGWSPKAG 413
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|298705588|emb|CBJ28839.1| (Ubiquitin carboxyl-terminal hydrolase, putative [Ectocarpus siliculosus]) HSP 1 Score: 113.235 bits (282), Expect = 3.110e-23 Identity = 76/222 (34.23%), Postives = 110/222 (49.55%), Query Frame = 0 Query: 195 TLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRRE--GTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRG----WSP 410 +++ C + +RE+L+ C SC A S +KQ++ LP V + H+KRFDA + RKI+ FV +P +GL+M Y+ W A G T+ S + G +G + ++G +P + YDL AVV H G + QGHY AFV KE GR W +DTWV V E+VL+++AY+LFY +RG W P Sbjct: 906 SITDCFARFAARESLTVRMACDSCSAASVCKTKQMSFCSLPRVLVLHLKRFDAMADRKIDDFVSFPARGLDMGKYLTGWPAAAASSSAGGVTSGASPSSSPPLDTGTAKGAPPATPAAAGAK-------AELSGDVPAPSLPYDLLAVVNHSGG-MAQGHYTAFV-------KEIGR-------WFRFDDTWVHEVEEEEVLSSEAYILFYFQRGADAAWRP 1105
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|788023679|ref|XP_011779741.1| (cysteine peptidase, Clan CA, family C19,putative [Trypanosoma brucei gambiense DAL972] >gi|261334483|emb|CBH17477.1| cysteine peptidase, Clan CA, family C19,putative [Trypanosoma brucei gambiense DAL972]) HSP 1 Score: 104.375 bits (259), Expect = 2.083e-20 Identity = 76/223 (34.08%), Postives = 104/223 (46.64%), Query Frame = 0 Query: 183 LPTPSPSVLDELTLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIR 405 T SP + + TL HCL ++E L G T ++ +KQ LH+LPNV I H+KRF+ F A K+ KFVRY PK LNM P+ C A +GT K + RRG + G S + + + S E LY+L A+ H G+SL GHY + V+ R +W CND + S + L+ AY+LFY R Sbjct: 301 FVTLSPEICGQ-TLEHCLSKLCAKERLEGRVYITPRGVTVNA-TKQFMLHKLPNVLIIHLKRFNEFGA-KVGKFVRY-PKILNMGPF----CTA----DGTLKKLRNHK--------RRGYKPSNGPASCDSSIYNSE-----ASNRSVECLYELNAICVHQGSSLSHGHYFSVVR-------------ARNESWIECNDGHISHCSEDHALSQSAYMLFYSR 485
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|1115875690|emb|SCU66384.1| (ubiquitin carboxyl-terminal hydrolase, putative [Trypanosoma equiperdum]) HSP 1 Score: 104.375 bits (259), Expect = 2.304e-20 Identity = 76/223 (34.08%), Postives = 104/223 (46.64%), Query Frame = 0 Query: 183 LPTPSPSVLDELTLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIR 405 T SP + + TL HCL ++E L G T ++ +KQ LH+LPNV I H+KRF+ F A K+ KFVRY PK LNM P+ C A +GT K + RRG + G S + + + S E LY+L A+ H G+SL GHY + V+ R +W CND + S + L+ AY+LFY R Sbjct: 301 FVTLSPEICGQ-TLEHCLSKLCAKERLEGRVYITPRGVTVNA-TKQFMLHKLPNVLIIHLKRFNEFGA-KVGKFVRY-PKILNMGPF----CTA----DGTLKKLRNHK--------RRGYKPSNGPASCDSSIYNSE-----ASNRSVECLYELNAICVHQGSSLSHGHYFSVVR-------------ARNESWIECNDGHISHCSEDHALSQSAYMLFYSR 485
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|71755375|ref|XP_828602.1| (ubiquitin carboxyl-terminal hydrolase [Trypanosoma brucei brucei TREU927] >gi|70833988|gb|EAN79490.1| ubiquitin carboxyl-terminal hydrolase, putative [Trypanosoma brucei brucei TREU927]) HSP 1 Score: 100.908 bits (250), Expect = 2.917e-19 Identity = 74/223 (33.18%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 183 LPTPSPSVLDELTLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIR 405 T SP + + TL HCL ++E L G T ++ +KQ LH+LPNV I H+KRF+ F A K+ KFVRY PK LN+ P+ C +GT K + RRG + G S + + + S E LY+L A+ H G+SL GHY + V+ R +W CND + S + L+ AY+LFY R Sbjct: 301 FVTLSPEICGQ-TLEHCLSKLCAKERLEGRVYITPRGVTVNA-TKQFMLHKLPNVLIIHLKRFNEFGA-KVGKFVRY-PKILNVGPF----CTT----DGTLKKLRNHK--------RRGYKPSNGPASCDSSIYNSE-----ASNRSVECLYELNAICVHQGSSLSHGHYFSVVR-------------ARNESWIECNDGHISHCSEDHALSQSAYMLFYSR 485
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|342185653|emb|CCC95138.1| (putative ubiquitin carboxyl-terminal hydrolase [Trypanosoma congolense IL3000]) HSP 1 Score: 100.523 bits (249), Expect = 3.543e-19 Identity = 77/216 (35.65%), Postives = 103/216 (47.69%), Query Frame = 0 Query: 195 TLSHCLDAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGG-----DRRGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIR 405 TL CL + E L P G + +KQ LH+LPNV I H+KRF+ F AR + KF+RY PK LN+APY C + G ++R++E G G D+RG G+S G EG NG E LY+L +V H G+S+ GHY V+ + G W CND + E+ L+ QAY+LFY R Sbjct: 311 TLERCLAHLFAEEELDGPVYKTPRGVKVHA-TKQFKLHKLPNVLIIHIKRFNEFGAR-VGKFIRY-PKVLNIAPY----CTTDGTLRGLHSQRRDE--GKSCDGLLPSYDKRG------------GFSVG--EGSNG---DIEYLYELNSVCVHQGSSISHGHYFTVVR-ASNG------------MWIECNDAHISNCDEERALSQQAYMLFYSR 487
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|570321508|gb|ETO69456.1| (hypothetical protein F444_13962 [Phytophthora parasitica P1976]) HSP 1 Score: 98.5969 bits (244), Expect = 1.079e-18 Identity = 67/216 (31.02%), Postives = 98/216 (45.37%), Query Frame = 0 Query: 195 TLSHCLDAYTSRETL--SCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSP-EILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRG 407 T+ L + + E L S C C + K L LH LPNV +FH++R D + +K+ K V++P GLNM P+ S+G + DR+ + ++ E NG P E +YDL AVV H G S+ GHY +FV++ EG R W + +D V+ V ++V +QAYLL+Y RR Sbjct: 390 TIESLLRQFAAEEELRGSNQVYCVRCSNYQTH-YKSLNLHTLPNVLVFHIRRLDFYRQQKLLKTVQFPLTGLNMRPFT--------------------SVGIDEASDRKKRDSKNAE---------------NGTPDDPSEYVYDLVAVVNHHGESVNGGHYTSFVRD------EGQR-------WILFDDVEVKTVPADEVEASQAYLLYYTRRN 556
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|570321510|gb|ETO69458.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1976]) HSP 1 Score: 97.8265 bits (242), Expect = 1.217e-18 Identity = 67/216 (31.02%), Postives = 98/216 (45.37%), Query Frame = 0 Query: 195 TLSHCLDAYTSRETL--SCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSP-EILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRG 407 T+ L + + E L S C C + K L LH LPNV +FH++R D + +K+ K V++P GLNM P+ S+G + DR+ + ++ E NG P E +YDL AVV H G S+ GHY +FV++ EG R W + +D V+ V ++V +QAYLL+Y RR Sbjct: 276 TIESLLRQFAAEEELRGSNQVYCVRCSNYQTH-YKSLNLHTLPNVLVFHIRRLDFYRQQKLLKTVQFPLTGLNMRPFT--------------------SVGIDEASDRKKRDSKNAE---------------NGTPDDPSEYVYDLVAVVNHHGESVNGGHYTSFVRD------EGQR-------WILFDDVEVKTVPADEVEASQAYLLYYTRRN 442
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|567983894|gb|ETL34277.1| (hypothetical protein L916_13468 [Phytophthora parasitica] >gi|568013377|gb|ETL87554.1| hypothetical protein L917_13276 [Phytophthora parasitica] >gi|570945283|gb|ETP10540.1| hypothetical protein F441_13858 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 98.2117 bits (243), Expect = 1.589e-18 Identity = 67/216 (31.02%), Postives = 98/216 (45.37%), Query Frame = 0 Query: 195 TLSHCLDAYTSRETL--SCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSP-EILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRG 407 T+ L + + E L S C C + K L LH LPNV +FH++R D + +K+ K V++P GLNM P+ S+G + DR+ + ++ E NG P E +YDL AVV H G S+ GHY +FV++ EG R W + +D V+ V ++V +QAYLL+Y RR Sbjct: 390 TIESLLRQFAAEEELRGSNQVYCVRCSNYQTH-YKSLNLHTLPNVLVFHIRRLDFYRQQKLLKTVQFPLTGLNMRPFT--------------------SVGIDEASDRKKRDSKNAE---------------NGRPDDPSEYVYDLVAVVNHHGESVNGGHYTSFVRD------EGQR-------WILFDDVEVKTVPADEVEASQAYLLYYTRRN 556
BLAST of EWM22884.1 vs. NCBI_GenBank
Match: gi|570976993|gb|ETP38695.1| (hypothetical protein F442_13770 [Phytophthora parasitica P10297]) HSP 1 Score: 98.2117 bits (243), Expect = 1.648e-18 Identity = 67/216 (31.02%), Postives = 98/216 (45.37%), Query Frame = 0 Query: 195 TLSHCLDAYTSRETL--SCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSARKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDRRGKRAREGEGSPQTGWSHGRREGMNGGSVSP-EILYDLFAVVEHMGASLQQGHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYLLFYIRRG 407 T+ L + + E L S C C + K L LH LPNV +FH++R D + +K+ K V++P GLNM P+ S+G + DR+ + ++ E NG P E +YDL AVV H G S+ GHY +FV++ EG R W + +D V+ V ++V +QAYLL+Y RR Sbjct: 390 TIESLLRQFAAEEELRGSNQVYCVRCSNYQTH-YKSLNLHTLPNVLVFHIRRLDFYRQQKLLKTVQFPLTGLNMRPFT--------------------SVGIDEASDRKKRDSKNAE---------------NGRPDDPSEYVYDLVAVVNHHGESVNGGHYTSFVRD------EGQR-------WILFDDVEVKTVPADEVEASQAYLLYYTRRN 556 The following BLAST results are available for this feature:
BLAST of EWM22884.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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