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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100102g3.71.mrna |
| Orig protein id | gnl|cribi|Naga_100102g3.71 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:177489..178546 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7725 ID=rna7725|Name=rna7725|organism=Nannochloropsis gaditana|type=mRNA|length=3287bp
TGTGGGAAATATCTCGTATGACAGCTTCCGTTTTCGCGTGCAAACATAAA
ATGTGCATGGATGGATTGCCAACTTGTTTGCCGTATTAACCGCCACACCA
CGTGCACGGACGGAAGATTTTTGGTCATCACTCAGTTGTCTTTGAGAAGA
ACATCCCGATTCTATGGCTCTGACGAGACATTTTCCGTGAGGTTCATCAT
CCTTTCCTTTTTCAAGCAGTCGATTTCGGATAGATGAACTATGTGTGCGG
CAGGTACTGGATAGATTGGTCCTTTGTACAGCAGAAGCGACCCTACGGGA
AAGTTTGTCGGGGCTTGCTCACATTGAGACGGCATCTTTGCTGAGTGGCT
GGGACGAGATGGAACATACTTGCCTGTTGCTCCTGCCCGCGAACTTTGTC
AGAGATTTCGGGCGTGGACTAGTTGGTGTCAGAGACGATATGGACACGGC
GTGATAGCGCTGCGAATTGTTTCAGGGGTTGTGAAAGATGTGAGGCACAT
GTGCTCCAGCACGGCGGCAGCGCAGACGGATCTGTCGAAGAACGTTTCCA
CGATTTCCACCGTGAGATAACCTCTTTTCGTACTTGTTCACTGTTACATT
CACAGCAAGCAACTTAGAAATAAATCTAGAGCATGGCATCCGCAGTGGAA
GGCGAATCCGTGGGCATCGACCTGGGCACCACCTACTCCTGCGTAGGAGT
CTGGCAGAACGACCGCGTGGAAATTATCGCCAATGATCAGGGAAACCGCA
CAACCCCCTCCTACGTGGCTTTCACGGAGTCCGAGCGCCTGATCGGCGAC
GCTGCCAAGAATCAGGTGGCAATGAACGCCTCCAACACTGTCTTCGACGC
CAAGCGCCTGATCGGGCGCCGGTTCTCGGACCCGGTGGTCCAGGCGGACA
TGAAGCACTGGCCCTTCACGGTCGTGCAGGGCCCCGGGGGCAAGCCGCTC
ATCCAGGTCACCTTCAAGGGCGAGTCCAAGACCTTCGCGCCGGAAGAGAT
CTCCTCCATGGTCCTGATCAAAATGCGTGAGATCGCCGAGGCCTACCTGG
GCAAGGAGGTGAAAAACGCCGTCATTACCGTCCCCGCCTACTTCAACGAC
TCGCAGCGACAGGCAACCAAGGACGCCGGCGCGATTGCCGGACTGAACGT
GCTCCGCATCATCAATGAGCCCACCGCCGCCGCCATCGCCTATGGCCTGG
ACAAGAAGGGCGCGGAGAAGACGGTCCTCATTTTCGACTTGGGAGGAGGT
AGGCCGCCCTCACGTCTCGCCCTCCATCCCTCCCCTCCCTCTTTTCCTCC
TTTGTGCGCCTCCGCTCCTCGGCTGCTGGCTTCTGACCGGTTTTATTCCC
ACACTCCCTTCTTCCCCGTCCAAACCCCCCCTCCCCCTCCAGGCACCTTC
GACGTGTCCCTCCTGACGATCGAGGAGGGCATCTTCGAGGTGAAGGCCAC
GGCGGGCGACACGCACCTGGGTGGGGAGGACTTCGACAACCGGATGGTGG
AGTACTGCACGGCCGAGTTCAAGAAGAAGCACCGAAAGGACATCACCAGC
AACCAGCGCGCCCTCCGCCGTCTGCGCACGGCCTGCGAACGCGCCAAGCG
CACCCTGTCCTCCTCCACCCAGGCGCACATCGAGATTGACTCTTTGTTCG
AGGGCATCGACTTCAACACCACTATCACGCGGGCTCGCTTCGAGGATCTG
AACATGGACTACTTCCGGAAGTGCATGGAACCCGTGGAAAAGGTTTTGCG
CGACGCCAAGATCGCCAAAAGCCAGGTGGACGAGGTGGTGCTGGTGGGCG
GGTCCACGCGCATCCCCAAGGTGCAGACGATGCTCATCGACTTCTTCAAC
GGGAAGGAGCCCTGCAAGAGCATCAATCCCGACGAGGCCGTCGCCTACGG
GGCCACGGTGCAGGCGGCCATCCTGTCGGGGCACAACAAGAGCGAGAAGC
TCTCGGACCTCCTGCTCCTGGACGTGACGCCCCTCTCCCTCGGACTGGAG
ACGGCCGGCGGCGTCATGACCACGCTCATCAAGCGCAACACCACCGTGCC
CGCCAAGAAGAGCCAGACCTTCTCCACCTACGCGGACAACCAGCCCGGTG
TGCTCATCCAGGTGTACGAGGGTGAGCGCGCCATGACCAAGGACAACAAC
CTGCTGGGCAAGTTTAACCTGGACGGGATCCCCCCCATGCCCCGCGGGCA
GCCCCAGATCGACGTGACTTTCGATATCGACGCCAACGGCATTTTGAACG
TGCACGCGGTGGAGAAGGGAACGGGAAAGGAGAACAAGATCACCATCACC
AACGACAAGGGGCGTCTCTCGGCGGACGAGATCGAGCGCATGGTCCAAGA
GGCGGAGCGTTACAAGCACGAGGACGAGGTGAACCGGACCCGGATCGAGG
CCAAGAACGGTCTGGAGAACTACGCCTTCTCCATCCGCAACACCATCAGC
GAACCCCAGATGGCGGAGAAGATGTCAGCCTCAGACAAGGAGACCGTAGA
GAACAAGATCAAGGAGGTCACCGAATGGCTGGACACACACCAGTCGGCCG
AGAAGGAGGAGTTCGAGGCCAAGCAGAAGGAGCTCGAGGGTGTTGTGCTA
CCCATCCTGCAGTCGCTCTCAGGGGGCGCCGGAGGGATGCCAGGAGGGAT
GCCCGGTGGGATGCCCGGTGGGATGCCCGGGGGGATGCCTGGGGGGATGC
CTGACATGGGAGCGGGAGGAGCAGGGGCAGGGCCTTCACCGGCGGCGGAC
GAGGGGCCCAAGATCGAAGAAATTGATTAAGACATGTGGGGGGGTGATAG
CTGGGATGGGGTCGGAGTGCAGGGAGGAGAGACAGGAGTCGGTTTACAGC
TGGTGAATGGCTCTCTTGCCGGAAATGCGCCTGGAAATGGAAAGTTTAAT
TTTGTTGGCGGGTCATCGAGTTGTGATATCTTGCATGGGGGGAAGACTGG
TGGAGGTTGCATCTCTGGGGAGGGAAAAGGAGTGAGTGATGTCATGGAAC
GTAGCCTTTTGGAATGGAAGGGATACTTAGTTGTGCTAAAGGCGAAAGAT
GGAATAAAAAAGGGCGACGAAAGATCCCCACGATTCTGTGTGAAGCCCAT
CGAAAGATCGATATGCAGTTGGTTTATTTCACCCATGTACACGCGTCTTG
CCCGTCAGTAGCACAGATGGGAATTCGAACCAAGTAAGGCGGAGAAACGG
GGGAAGGCACGTACAAAAGCCAAGACAGGACACGCACACGTACAAAATAG
GCCTGAAAGTCAACAGATATTTCCCCTCTCGCTCTGC back to topprotein sequence of rna7725 >rna7725-protein ID=rna7725-protein|Name=rna7725|organism=Nannochloropsis gaditana|type=polypeptide|length=271bp
MSPASSATAPPVKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYH
RRRGHCCGNICRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAKD
HGASPSAGEGDDHGGHGGGQENSGSDHNSTVQVLTADLVKGSATAKMGQD
DAEGMANVANPRETGVFAVRPAVVTSALPGTGPLPGASGGCVLASLLIMR
PGQRLIDKSELRAVALPAKSPSMPFLQSALRSCWLQRAFRPFIAPSRWSG
SFGSFVLAYITLSDQINKCHN back to topmRNA from alignment at CM002473.1:177489..178546- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7725 ID=rna7725|Name=rna7725|organism=Nannochloropsis gaditana|type=mRNA|length=1058bp|location=Sequence derived from alignment at CM002473.1:177489..178546- (Nannochloropsis gaditana)
ATGTCCCCGGCGTCGTCAGCTACGGCGCCACCGGTAAAGCCACCGCTGCC
GCCTGAGATCGAGGACTTACACGCCTCAGCGGTGGCGCAGGGCCAGGAGA
CCTACACGGACCCCGCCACTGGCTACATGGTCATGACTGCGCTCTATCAC
AGGTATGTCGACGAGCATGGGGACTCTCTCCTTTTTTCTCCTAACTGTCA
TTGACGTTTGGGGGGCAAAACTTGATATTCCACCACGCACGCGCATAGGC
GACGCGGCCACTGTTGCGGTAACATTTGTCGGCATTGCCCGTACGACTCA
GTCAATGTGGGAAAAAAGAAGGTAGACTGGGTGATGAGCGACGGCAGCAA
ATATACAGCCAAGAAGGCCGCCGCCTTAAGGAGGGCTGCGAAAGACCACG
GGGCCAGCCCGTCGGCCGGAGAGGGCGATGACCACGGAGGCCACGGCGGG
GGGCAGGAAAATAGCGGCTCCGACCATAATTCAACAGTCCAAGTCCTCAC
CGCGGATCTTGTTAAGGGCAGTGCAACTGCGAAGATGGGTCAAGACGATG
CCGAAGGCATGGCAAATGTTGCGAATCCGCGCGAGACAGGGGTCTTCGCC
GTCAGACCAGCTGTTGTTACATCCGCTCTACCAGGTGAGTGCTTAATGAC
ATCTCAGCATGCAAAGAATTGTATAGGGCTGATGAATGCCATCATATGCT
GAAAGGTACAGGACCGTTACCGGGCGCAAGCGGAGGCTGTGTCCTGGCAA
GCCTTTTGATCATGCGGCCAGGGCAACGGCTCATCGACAAAAGTGAACTG
CGAGCTGTCGCACTACCAGCAAAATCACCAAGCATGCCTTTTCTCCAGTC
TGCTTTGCGGAGCTGCTGGCTGCAACGTGCTTTCCGGTAGGTCAACAGGT
GCACATGAGAGACAAGCCGATACAGCAGTCTCAAGGGACCTTTTCCCTCC
TTCAACAATAGGCCGTTCATCGCTCCAAGTCGATGGTCAGGATCTTTTGG
GAGCTTCGTGCTTGCATACATCACGTTGAGCGACCAAATAAATAAATGCC
ATAATTGA back to topCoding sequence (CDS) from alignment at CM002473.1:177489..178546- >rna7725 ID=rna7725|Name=rna7725|organism=Nannochloropsis gaditana|type=CDS|length=3264bp|location=Sequence derived from alignment at CM002473.1:177489..178546- (Nannochloropsis gaditana)
GCCGTTCATCGCTCCAAGTCGATGGTCAGGATCTTTTGGGAGCTTCGTGC
TTGCATACATCACGTTGAGCGACCAAATAAATAAATGCCATAATTGAGTA
CAGGACCGTTACCGGGCGCAAGCGGAGGCTGTGTCCTGGCAAGCCTTTTG
ATCATGCGGCCAGGGCAACGGCTCATCGACAAAAGTGAACTGCGAGCTGT
CGCACTACCAGCAAAATCACCAAGCATGCCTTTTCTCCAGTCTGCTTTGC
GGAGCTGCTGGCTGCAACGTGCTTTCCGGCGACGCGGCCACTGTTGCGGT
AACATTTGTCGGCATTGCCCGTACGACTCAGTCAATGTGGGAAAAAAGAA
GGTAGACTGGGTGATGAGCGACGGCAGCAAATATACAGCCAAGAAGGCCG
CCGCCTTAAGGAGGGCTGCGAAAGACCACGGGGCCAGCCCGTCGGCCGGA
GAGGGCGATGACCACGGAGGCCACGGCGGGGGGCAGGAAAATAGCGGCTC
CGACCATAATTCAACAGTCCAAGTCCTCACCGCGGATCTTGTTAAGGGCA
GTGCAACTGCGAAGATGGGTCAAGACGATGCCGAAGGCATGGCAAATGTT
GCGAATCCGCGCGAGACAGGGGTCTTCGCCGTCAGACCAGCTGTTGTTAC
ATCCGCTCTACCAGATGTCCCCGGCGTCGTCAGCTACGGCGCCACCGGTA
AAGCCACCGCTGCCGCCTGAGATCGAGGACTTACACGCCTCAGCGGTGGC
GCAGGGCCAGGAGACCTACACGGACCCCGCCACTGGCTACATGGTCATGA
CTGCGCTCTATCACAGGCCGTTCATCGCTCCAAGTCGATGGTCAGGATCT
TTTGGGAGCTTCGTGCTTGCATACATCACGTTGAGCGACCAAATAAATAA
ATGCCATAATTGAGTACAGGACCGTTACCGGGCGCAAGCGGAGGCTGTGT
CCTGGCAAGCCTTTTGATCATGCGGCCAGGGCAACGGCTCATCGACAAAA
GTGAACTGCGAGCTGTCGCACTACCAGCAAAATCACCAAGCATGCCTTTT
CTCCAGTCTGCTTTGCGGAGCTGCTGGCTGCAACGTGCTTTCCGGCGACG
CGGCCACTGTTGCGGTAACATTTGTCGGCATTGCCCGTACGACTCAGTCA
ATGTGGGAAAAAAGAAGGTAGACTGGGTGATGAGCGACGGCAGCAAATAT
ACAGCCAAGAAGGCCGCCGCCTTAAGGAGGGCTGCGAAAGACCACGGGGC
CAGCCCGTCGGCCGGAGAGGGCGATGACCACGGAGGCCACGGCGGGGGGC
AGGAAAATAGCGGCTCCGACCATAATTCAACAGTCCAAGTCCTCACCGCG
GATCTTGTTAAGGGCAGTGCAACTGCGAAGATGGGTCAAGACGATGCCGA
AGGCATGGCAAATGTTGCGAATCCGCGCGAGACAGGGGTCTTCGCCGTCA
GACCAGCTGTTGTTACATCCGCTCTACCAGATGTCCCCGGCGTCGTCAGC
TACGGCGCCACCGGTAAAGCCACCGCTGCCGCCTGAGATCGAGGACTTAC
ACGCCTCAGCGGTGGCGCAGGGCCAGGAGACCTACACGGACCCCGCCACT
GGCTACATGGTCATGACTGCGCTCTATCACAGGCCGTTCATCGCTCCAAG
TCGATGGTCAGGATCTTTTGGGAGCTTCGTGCTTGCATACATCACGTTGA
GCGACCAAATAAATAAATGCCATAATTGAGTACAGGACCGTTACCGGGCG
CAAGCGGAGGCTGTGTCCTGGCAAGCCTTTTGATCATGCGGCCAGGGCAA
CGGCTCATCGACAAAAGTGAACTGCGAGCTGTCGCACTACCAGCAAAATC
ACCAAGCATGCCTTTTCTCCAGTCTGCTTTGCGGAGCTGCTGGCTGCAAC
GTGCTTTCCGGCGACGCGGCCACTGTTGCGGTAACATTTGTCGGCATTGC
CCGTACGACTCAGTCAATGTGGGAAAAAAGAAGGTAGACTGGGTGATGAG
CGACGGCAGCAAATATACAGCCAAGAAGGCCGCCGCCTTAAGGAGGGCTG
CGAAAGACCACGGGGCCAGCCCGTCGGCCGGAGAGGGCGATGACCACGGA
GGCCACGGCGGGGGGCAGGAAAATAGCGGCTCCGACCATAATTCAACAGT
CCAAGTCCTCACCGCGGATCTTGTTAAGGGCAGTGCAACTGCGAAGATGG
GTCAAGACGATGCCGAAGGCATGGCAAATGTTGCGAATCCGCGCGAGACA
GGGGTCTTCGCCGTCAGACCAGCTGTTGTTACATCCGCTCTACCAGATGT
CCCCGGCGTCGTCAGCTACGGCGCCACCGGTAAAGCCACCGCTGCCGCCT
GAGATCGAGGACTTACACGCCTCAGCGGTGGCGCAGGGCCAGGAGACCTA
CACGGACCCCGCCACTGGCTACATGGTCATGACTGCGCTCTATCACAGGC
CGTTCATCGCTCCAAGTCGATGGTCAGGATCTTTTGGGAGCTTCGTGCTT
GCATACATCACGTTGAGCGACCAAATAAATAAATGCCATAATTGAGTACA
GGACCGTTACCGGGCGCAAGCGGAGGCTGTGTCCTGGCAAGCCTTTTGAT
CATGCGGCCAGGGCAACGGCTCATCGACAAAAGTGAACTGCGAGCTGTCG
CACTACCAGCAAAATCACCAAGCATGCCTTTTCTCCAGTCTGCTTTGCGG
AGCTGCTGGCTGCAACGTGCTTTCCGGCGACGCGGCCACTGTTGCGGTAA
CATTTGTCGGCATTGCCCGTACGACTCAGTCAATGTGGGAAAAAAGAAGG
TAGACTGGGTGATGAGCGACGGCAGCAAATATACAGCCAAGAAGGCCGCC
GCCTTAAGGAGGGCTGCGAAAGACCACGGGGCCAGCCCGTCGGCCGGAGA
GGGCGATGACCACGGAGGCCACGGCGGGGGGCAGGAAAATAGCGGCTCCG
ACCATAATTCAACAGTCCAAGTCCTCACCGCGGATCTTGTTAAGGGCAGT
GCAACTGCGAAGATGGGTCAAGACGATGCCGAAGGCATGGCAAATGTTGC
GAATCCGCGCGAGACAGGGGTCTTCGCCGTCAGACCAGCTGTTGTTACAT
CCGCTCTACCAGATGTCCCCGGCGTCGTCAGCTACGGCGCCACCGGTAAA
GCCACCGCTGCCGCCTGAGATCGAGGACTTACACGCCTCAGCGGTGGCGC
AGGGCCAGGAGACCTACACGGACCCCGCCACTGGCTACATGGTCATGACT
GCGCTCTATCACAG back to top
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