EWM22960.1, cds7704 (CDS) Nannochloropsis gaditana

Overview
NameEWM22960.1
Unique Namecds7704
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:178395..178546 -
Alignment locationCM002473.1:177913..178298 -
Alignment locationCM002473.1:177661..177841 -
Alignment locationCM002473.1:177489..177585 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22960.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100102g3.71.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:178395..178546 -
CM002473.1supercontigCM002473.1:177913..178298 -
CM002473.1supercontigCM002473.1:177661..177841 -
CM002473.1supercontigCM002473.1:177489..177585 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
Homology
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|585103693|gb|EWM22960.1| (hypothetical protein Naga_100102g3 [Nannochloropsis gaditana])

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
Query:    1 MSPASSATAPPVKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAKDHGASPSAGEGDDHGGHGGGQENSGSDHNSTVQVLTADLVKGSATAKMGQDDAEGMANVANPRETGVFAVRPAVVTSALPGTGPLPGASGGCVLASLLIMRPGQRLIDKSELRAVALPAKSPSMPFLQSALRSCWLQRAFRPFIAPSRWSGSFGSFVLAYITLSDQINKCHN 271
            MSPASSATAPPVKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAKDHGASPSAGEGDDHGGHGGGQENSGSDHNSTVQVLTADLVKGSATAKMGQDDAEGMANVANPRETGVFAVRPAVVTSALPGTGPLPGASGGCVLASLLIMRPGQRLIDKSELRAVALPAKSPSMPFLQSALRSCWLQRAFRPFIAPSRWSGSFGSFVLAYITLSDQINKCHN
Sbjct:    1 MSPASSATAPPVKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAKDHGASPSAGEGDDHGGHGGGQENSGSDHNSTVQVLTADLVKGSATAKMGQDDAEGMANVANPRETGVFAVRPAVVTSALPGTGPLPGASGGCVLASLLIMRPGQRLIDKSELRAVALPAKSPSMPFLQSALRSCWLQRAFRPFIAPSRWSGSFGSFVLAYITLSDQINKCHN 271          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|553181754|ref|XP_005853618.1| (putative-like protein [Nannochloropsis gaditana CCMP526] >gi|422295445|gb|EKU22744.1| putative-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 369.007 bits (946), Expect = 2.384e-127
Identity = 178/184 (96.74%), Postives = 180/184 (97.83%), Query Frame = 0
Query:    1 MSPASSATAPPVKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAKDHGASPSAGEGDDHGGHGGGQENSGSDHNSTVQVLTADLVKGSATAKMGQDDAEGMANVANPRETGVFAVRPAVVTSALPGTGPL 184
            MSPASSATAPPVKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGN+CRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAKDHGASPSAGEGDDHGGHGGGQENSGSDHNSTVQVLT +LVKGSATAKMGQDDAEGMANVANPRETGVFAVRPAVVTSALPG   L
Sbjct:    1 MSPASSATAPPVKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNVCRHCPYDSVNVGKKKVDWVMSDGSKYTAKKAAALRRAAKDHGASPSAGEGDDHGGHGGGQENSGSDHNSTVQVLTTELVKGSATAKMGQDDAEGMANVANPRETGVFAVRPAVVTSALPGRSSL 184          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|1001605866|gb|KXS09726.1| (hypothetical protein M427DRAFT_63628 [Gonapodya prolifera JEL478])

HSP 1 Score: 102.449 bits (254), Expect = 5.232e-24
Identity = 47/76 (61.84%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   16 LPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGKKKVDWVMSDGSKYTAKKA 91
            LPPEIE+LH  AV +G  TYTDPATGYMV TAL HR RG+CCGN CRHCP++  NVG+K  + +  D     AKKA
Sbjct:   31 LPPEIEELHRCAVEKGDRTYTDPATGYMVFTALSHRDRGYCCGNTCRHCPFEYENVGRKGKNMIRRDKE---AKKA 103          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|1183510733|gb|ORZ33978.1| (hypothetical protein BCR44DRAFT_37294 [Catenaria anguillulae PL171])

HSP 1 Score: 83.9593 bits (206), Expect = 5.372e-17
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0
Query:   21 EDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGK 73
            + +H  A+ +GQ++Y DPATGYMVMT+L H +RG+CCGN CRHCP+D  NVGK
Sbjct:   17 QKVHDEAIMKGQDSYIDPATGYMVMTSLSHSKRGYCCGNNCRHCPFDHRNVGK 69          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|1210523365|dbj|GAX18002.1| (cob(I)alamin adenosyltransferase [Fistulifera solaris])

HSP 1 Score: 88.1965 bits (217), Expect = 1.240e-16
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   19 EIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNV-GKKKVDWV 79
            +IE++H  AV QG  TY DP TG+ V T L HRRRG CCGN+CRHCPYD VNV GK K   V
Sbjct:    3 DIEEIHRRAVEQGSTTYIDPDTGFTVFTELAHRRRGFCCGNMCRHCPYDHVNVRGKTKTRKV 64          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|909128509|gb|KNE55667.1| (hypothetical protein AMAG_01555 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 83.9593 bits (206), Expect = 3.460e-16
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   18 PEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGK 73
            P    +HA A  +G+ETYTDP TGY V TA+ H++RG+CCGN CRHCPY+  NVGK
Sbjct:   69 PAWIQIHADACKRGEETYTDPVTGYSVFTAVSHKKRGYCCGNQCRHCPYEYRNVGK 124          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|528264297|gb|EPY39489.1| (cob(I)alamin adenosyltransferase [Angomonas deanei])

HSP 1 Score: 86.6557 bits (213), Expect = 4.728e-16
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   12 VKPPLPPEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGKK 74
            ++  LP +IE++H +AV QG++TY DPATG+ V T L H ++  CCG  CRHCPY  VNVGKK
Sbjct:   55 IEKSLPADIEEIHTNAVLQGKDTYEDPATGFTVFTRLAHLKKEQCCGCRCRHCPYGHVNVGKK 117          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|1183345386|gb|ORX74252.1| (hypothetical protein DL89DRAFT_289855 [Linderina pennispora])

HSP 1 Score: 79.7221 bits (195), Expect = 1.960e-15
Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
Query:   16 LPPEIED-----LHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGK 73
            +P +IED     +H +A+A G  TYTDPATGY V T L H  R +CCGN CRHCPY+  NVGK
Sbjct:   23 MPGDIEDTPWRRIHEAALANGDRTYTDPATGYTVFTELSHLDREYCCGNACRHCPYNQENVGK 85          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|909131881|gb|KNE58481.1| (hypothetical protein AMAG_04052 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 81.2629 bits (199), Expect = 3.273e-15
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   18 PEIEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNVGK 73
            P    +HA A  + +ETYTDPATGY V TA+ H++RG+CCGN CRHCPY+  NVGK
Sbjct:   72 PVWVQIHADACMRCEETYTDPATGYSVFTAVSHKKRGYCCGNQCRHCPYEYRNVGK 127          
BLAST of EWM22960.1 vs. NCBI_GenBank
Match: gi|617559159|ref|XP_007539815.1| (PREDICTED: uncharacterized protein C1orf53 homolog [Erinaceus europaeus])

HSP 1 Score: 80.1073 bits (196), Expect = 3.549e-15
Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 0
Query:   11 PVKPPLPPE---IEDLHASAVAQGQETYTDPATGYMVMTALYHRRRGHCCGNICRHCPYDSVNV 71
            P    L PE   I DLH++A   GQ  Y DPATGY+V+T L H +RG CCG+ CRHCPY  VNV
Sbjct:   60 PTSEELTPEERRIADLHSAACEAGQLNYVDPATGYLVLTKLAHLQRGQCCGSACRHCPYGQVNV 123          
The following BLAST results are available for this feature:
BLAST of EWM22960.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103693|gb|EWM22960.1|0.000e+0100.00hypothetical protein Naga_100102g3 [Nannochloropsi... [more]
gi|553181754|ref|XP_005853618.1|2.384e-12796.74putative-like protein [Nannochloropsis gaditana CC... [more]
gi|1001605866|gb|KXS09726.1|5.232e-2461.84hypothetical protein M427DRAFT_63628 [Gonapodya pr... [more]
gi|1183510733|gb|ORZ33978.1|5.372e-1762.26hypothetical protein BCR44DRAFT_37294 [Catenaria a... [more]
gi|1210523365|dbj|GAX18002.1|1.240e-1662.90cob(I)alamin adenosyltransferase [Fistulifera sola... [more]
gi|909128509|gb|KNE55667.1|3.460e-1660.71hypothetical protein AMAG_01555 [Allomyces macrogy... [more]
gi|528264297|gb|EPY39489.1|4.728e-1655.56cob(I)alamin adenosyltransferase [Angomonas deanei... [more]
gi|1183345386|gb|ORX74252.1|1.960e-1557.14hypothetical protein DL89DRAFT_289855 [Linderina p... [more]
gi|909131881|gb|KNE58481.1|3.273e-1560.71hypothetical protein AMAG_04052 [Allomyces macrogy... [more]
gi|617559159|ref|XP_007539815.1|3.549e-1556.25PREDICTED: uncharacterized protein C1orf53 homolog... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7725rna7725Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications