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Properties
| Property Name | Value |
|---|
| Product | glycoside hydrolase 15-like protein |
| Orig transcript id | gnl|cribi|Naga_101101g2.4444.mrna |
| Orig protein id | gnl|cribi|Naga_101101g2.4444 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:143230..145180 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7709 ID=rna7709|Name=rna7709|organism=Nannochloropsis gaditana|type=mRNA|length=897bp
GCCTTAGCTCTCCTCATCTCCTTCCCCTACCTGCTGCGGCCCAAGGGCGG
GAAGAAGGAGGAGCGTGAGGAGGAAGGGAAGGAGGAGACCAAAGGGGAGG
AGGAGGAGAAGGAGGAGAGGAGGAGGAGGAGGAGGATGAGGATGAGGATG
AGGAGGATGAGGAGGATGAGGAGGAGGAGGAGGAGGAGGTTCAGGAAGGG
AGGCGCAGTACCCGTGGCCGGAAGAAGGCTGAGTAAGGAGGGAAGGAGGA
AGAGAGGGAGGGATGGAACGACGGGGAAGAGGAGGATGGGCTGGGAAAAG
GAACGACAAAGTAGTCAAAGCCGCGAAGAGAGAGTAGAAAATGTGGAGAG
AACAAGACAGGGAAGGCCCCCACAGCTTCGAATTTCATCCGACTTGAGAG
AAAAAAATCGGGATCCTTTCCTCCCCTCCTCGGTCTATTTCCGAGGCTTG
AAGGGAGGAAGGAGGGGGGGAGGGTGGGCGGGAGGGAGGGAGAGATCAGA
AAGGAAGGGGAAGGAATGGGAAGTAAGAGCCTCCGTCCCCGTTCCTGGGC
TTATCCTGCTTTTCGCGCATTTTTTTCCTTCAAAGAGCGGGGTTTCTGAG
GAGGATGGACGAGCAAAAAAGTTAAGGAGGCCCCTTCTTCTGTCCTCACC
CTACCCCTCGTTCTGGTCCTAATTTTCATACATATACATGTACGTTTATG
TATATATCCTAATTCTCATACATCTACATAAACGTTTATATGTATATCCC
GCCCTATCCCTCTGTCGCCTTAGCATTCACACCCCAGTCGTATGGCTCGT
ACTCGACCTTTACCTCCCTCCCTTCTCCCTCCCTTCCTCCACCGCCCTCC
TTGCCTCCTCTGGAAACCATTGCACTACCCTCCTCAGCATTTCCTCC back to topprotein sequence of rna7709 >rna7709-protein ID=rna7709-protein|Name=rna7709|organism=Nannochloropsis gaditana|type=polypeptide|length=351bp
MVQLFQATKMLGGFLSILPASGPKRVLNDPNTFPPALVPSSSFASFPPSP
PTSSTNNVSLLIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQ
MTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSR
TSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNL
PILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDA
RIHFALNCGANSCPAIRYYEAGGEGGREGGKEGGRPAGILETMQGGGKGG
EGGGKLEQQLEAAARAFFCGYAGGGGGREGGREGERKVGGVLEQDMCLVP
E back to topmRNA from alignment at CM002473.1:143230..145180- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7709 ID=rna7709|Name=rna7709|organism=Nannochloropsis gaditana|type=mRNA|length=1951bp|location=Sequence derived from alignment at CM002473.1:143230..145180- (Nannochloropsis gaditana)
CGTCCCCCACTTCAACACTTTCGCTTCCATATTTCATTTAGCAACTAGAA
ATATTTACCCATAATACCCCAATACAATGGATTGATGGATAGGATTCGGT
TTCGTGGAGCAGATCGCAGGTGTGGTGGGCATTTGTGCTGTTCTCAGAGG
GGGGGCAAGAGCTGCTGAGAAAATGAACGTCAAGGTCCTGCGTGCGCTTG
CAGGAGGGGCTGCTTTGCCATCGGGTGATACTGGAGGAGATTCAAGACTC
CATTATCTAGGTTGGTCGGGATACTGCGTGCCATCTCGGGAGGAACAGGC
CCTGAGAGCGGCCGAAATGTTCATCAAAGCCGCCAAAAGCGTCATCGATC
CGCAGCACAACTCGCAACTTCCTCACTTACGCAGAACACAGGACGATAAC
GGTGTTTTGAAAGGACCGACGCCATTTCGATGTAAGAGGTAGAAGGTAGA
GACATTTCCGGCCTTTTTCCCTCCGAATGAGCGTAACTCTGTCCCTGTGG
CACGTGAAGCGAGTCTTAAAAGTGAATAACCTCCCCCCCCCGTGACGGGC
GCCCGGGTGAAAAAAAGCATGATACATTTCAAAGGGCCTTCTGTTTTTCT
ATTGGTCTATATTCGCACTTTGACGGAACCCAGAATATTGGCAAGAGAGA
TGGCAGTGAGGTAATCAACGCACTCCCGGGTGTAGCAACTGCACAACTTC
CACATCTGAAGCACCGTACGTTAAAAACTGCTTTGAGTTCTACCCTGCGG
CACAAAAACTTTTGTCGAAGGTTCCTTCTATTTTTGTTTGTCTTATAGAG
TACATACACTGATCTCCACCCCGACCATCCGTCTCCATTTTTCACAAGAA
AAGGGCGTTGGTTTCTTGGCTATCCATGGTCCAGCTCTTTCAAGCAACAA
AAATGCTTGGCGGGTTCTTGAGCATCTTGCCAGCCTCCGGGCCCAAACGT
GTGCTGAACGACCCCAACACCTTCCCGCCAGCCCTCGTCCCGTCTTCCTC
CTTTGCCTCCTTTCCCCCTTCACCCCCCACTTCCTCCACCAACAACGTCT
CCCTCCTTATCCAAGATCTCCGCCGTCGCTCTCGCAGCATGCAGGGCGCC
TTCCTCTCCCCCAACGGGAAGCACGTCGATTACCCATCTCTCTTGACCAG
CGAGGCATTTGCATCGTATTTGCAGATGACCACGCATCTGGCTACTCTCA
CAGGCGTGGGCGCTCTGTCCCCGGATGAGCGGAAAGCCACCTTCCTAAAC
CTGTACAACTGCCTCGTCATTCATGCCCTCACCCTCGACTCCGCCCGCCC
TCCCTCCTCCTCGTCCTGGAGCCGCACTTCGTTCTACGCCCGGACCTGCT
ACTGTGTAGGCGGGCACATACTCAGCCTGGACGACCTGGAGAACGGCTTA
TTGCGGGGCAACCGTCGAAGCCCCAACCCGTTGGCTCGCCCTTCCATTTT
TTCCGCGAAGCACTTCCCGAACCTCCCTATCTTGCCTCCACTCTCCTCTT
TCCCCTCCTCCTCCACCTTCCCCCCGACCAATGCCCCGACAGACGCCCCC
GACGCGCCTTCCTACCCCCCCGCCAGCCCCTCCTCGCCCGAATCTCTTGC
CGACTGGATCGTGCCCTTGGATGCACGCATCCATTTCGCCCTCAACTGCG
GCGCGAATTCCTGCCCTGCCATCCGATATTACGAGGCCGGGGGAGAGGGA
GGGCGGGAGGGAGGGAAGGAAGGAGGGCGCCCGGCAGGGATCCTCGAGAC
GATGCAAGGAGGGGGGAAGGGCGGGGAGGGGGGAGGGAAATTAGAGCAAC
AATTGGAGGCGGCGGCGCGCGCCTTTTTTTGCGGGTACGCGGGTGGTGGA
GGAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGGAAAGTTGGTGGTGTACT
TGAACAAGATATGTGCCTGGTACCGGAGTGATTTCGCAGAGGGGGAGGAG
G back to topCoding sequence (CDS) from alignment at CM002473.1:143230..145180- >rna7709 ID=rna7709|Name=rna7709|organism=Nannochloropsis gaditana|type=CDS|length=1056bp|location=Sequence derived from alignment at CM002473.1:143230..145180- (Nannochloropsis gaditana)
ATGGTCCAGCTCTTTCAAGCAACAAAAATGCTTGGCGGGTTCTTGAGCAT
CTTGCCAGCCTCCGGGCCCAAACGTGTGCTGAACGACCCCAACACCTTCC
CGCCAGCCCTCGTCCCGTCTTCCTCCTTTGCCTCCTTTCCCCCTTCACCC
CCCACTTCCTCCACCAACAACGTCTCCCTCCTTATCCAAGATCTCCGCCG
TCGCTCTCGCAGCATGCAGGGCGCCTTCCTCTCCCCCAACGGGAAGCACG
TCGATTACCCATCTCTCTTGACCAGCGAGGCATTTGCATCGTATTTGCAG
ATGACCACGCATCTGGCTACTCTCACAGGCGTGGGCGCTCTGTCCCCGGA
TGAGCGGAAAGCCACCTTCCTAAACCTGTACAACTGCCTCGTCATTCATG
CCCTCACCCTCGACTCCGCCCGCCCTCCCTCCTCCTCGTCCTGGAGCCGC
ACTTCGTTCTACGCCCGGACCTGCTACTGTGTAGGCGGGCACATACTCAG
CCTGGACGACCTGGAGAACGGCTTATTGCGGGGCAACCGTCGAAGCCCCA
ACCCGTTGGCTCGCCCTTCCATTTTTTCCGCGAAGCACTTCCCGAACCTC
CCTATCTTGCCTCCACTCTCCTCTTTCCCCTCCTCCTCCACCTTCCCCCC
GACCAATGCCCCGACAGACGCCCCCGACGCGCCTTCCTACCCCCCCGCCA
GCCCCTCCTCGCCCGAATCTCTTGCCGACTGGATCGTGCCCTTGGATGCA
CGCATCCATTTCGCCCTCAACTGCGGCGCGAATTCCTGCCCTGCCATCCG
ATATTACGAGGCCGGGGGAGAGGGAGGGCGGGAGGGAGGGAAGGAAGGAG
GGCGCCCGGCAGGGATCCTCGAGACGATGCAAGGAGGGGGGAAGGGCGGG
GAGGGGGGAGGGAAATTAGAGCAACAATTGGAGGCGGCGGCGCGCGCCTT
TTTTTGCGGGTACGCGGGTGGTGGAGGAGGGAGGGAGGGAGGGAGGGAGG
GGGAGAGGAAAGTTGGTGGTGTACTTGAACAAGATATGTGCCTGGTACCG
GAGTGA back to top
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