EWM22984.1, cds7688 (CDS) Nannochloropsis gaditana

Overview
NameEWM22984.1
Unique Namecds7688
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:143250..144305 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22984.1
Productglycoside hydrolase 15-like protein
Orig transcript idgnl|cribi|Naga_101101g2.4444.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:143250..144305 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR006869DUF547
Homology
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|585103729|gb|EWM22984.1| (glycoside hydrolase 15-like protein [Nannochloropsis gaditana])

HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query:    1 MVQLFQATKMLGGFLSILPASGPKRVLNDPNTFPPALVPSSSFASFPPSPPTSSTNNVSLLIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEAGGEGGREGGKEGGRPAGILETMQGGGKGGEGGGKLEQQLEAAARAFFCGYAGGGGGREGGREGERKVGGVLEQDMCLVPE 351
            MVQLFQATKMLGGFLSILPASGPKRVLNDPNTFPPALVPSSSFASFPPSPPTSSTNNVSLLIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEAGGEGGREGGKEGGRPAGILETMQGGGKGGEGGGKLEQQLEAAARAFFCGYAGGGGGREGGREGERKVGGVLEQDMCLVPE
Sbjct:    1 MVQLFQATKMLGGFLSILPASGPKRVLNDPNTFPPALVPSSSFASFPPSPPTSSTNNVSLLIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEAGGEGGREGGKEGGRPAGILETMQGGGKGGEGGGKLEQQLEAAARAFFCGYAGGGGGREGGREGERKVGGVLEQDMCLVPE 351          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|923130263|ref|XP_013758597.1| (glutaredoxin [Thecamonas trahens ATCC 50062] >gi|906555242|gb|KNC48485.1| glutaredoxin [Thecamonas trahens ATCC 50062])

HSP 1 Score: 113.62 bits (283), Expect = 1.414e-25
Identity = 73/196 (37.24%), Postives = 97/196 (49.49%), Query Frame = 0
Query:   77 LSPNGKHVDYPSLLTSEAFASYLQMTTHLA---TLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYY 269
            LS +G+ VDY S+  S AF  Y+     LA   T+  +  L+ D+ KATF+NLYN +VIHA  +  A  P   +  RTSF+A++ Y +GG +LSLDD+E+G+LRGN   P P  R S       P L                                       +LA  + P+D RIHFAL CGA SCP IR +
Sbjct:   42 LSDDGRQVDYASMRASTAFGQYVAEVARLADEVTVDQLCDLTDDQVKATFINLYNAIVIHATVVRGA--PGDMA-QRTSFFAQSAYRIGGELLSLDDIEHGVLRGNAVHPAPWFRGSQLDVARRPQLA--------------------------------------ALAARMRPVDPRIHFALVCGAVSCPPIRVF 196          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|321459543|gb|EFX70595.1| (hypothetical protein DAPPUDRAFT_228243 [Daphnia pulex])

HSP 1 Score: 112.079 bits (279), Expect = 6.619e-25
Identity = 74/230 (32.17%), Postives = 101/230 (43.91%), Query Frame = 0
Query:   65 LRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEAGGEGGREGGKEGGRPAGILETMQ 294
            L+R    ++G +LS +GK VDY  L     F  +   +  LA L  +  LSP +RKA F+N+YN L IHAL+     P  SS    T+F+  + Y + G + SLDD+E+G+LR N R P+ L++P                                        +    P    SL +    LD RIHF LNCG  SCPAI  Y    E   E          + ET+Q
Sbjct:   52 LQRMILKLKGKYLSEDGKSVDYAELRNDNLFKEFQAQSEQLADLE-LADLSPVQRKAFFINIYNTLTIHALS--KVEPLPSSLLEVTNFWKHSAYKISGLVFSLDDIEHGILRANTRHPSALSKP----------------------------------------FKDDDPRVQFSLKE----LDPRIHFVLNCGGKSCPAIGVY---NEDNLEAALSNAATNFLSETVQ 231          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|1176120871|ref|XP_020631731.1| (uncharacterized protein LOC110068661 [Orbicella faveolata])

HSP 1 Score: 109.768 bits (273), Expect = 9.760e-25
Identity = 71/211 (33.65%), Postives = 101/211 (47.87%), Query Frame = 0
Query:   61 LIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEA 271
            L +DL+R    ++G+F++  G+ VDY +L  S+ F  Y+  T  L  L  +G L   E+ A FLN+YN L IH L +  +  P+S      +F+ RT Y +GG+  SLDD+E+G+LRGNR  P+P                                      +   P +    P     L   +  +D RIHFAL CGA SCPAIR + A
Sbjct:   28 LSKDLQRLMLKIKGSFITEEGRAVDYSALKESDLFQEYVDRTKALKALN-LGNLEQKEKIAFFLNIYNSLTIHGLAMCESGLPNSV-LEVENFWRRTSYNIGGYTFSLDDIEHGILRGNR--PHP--------------------------------------SGGKPLFEDTDP----RLRFTVTEVDPRIHFALVCGAKSCPAIRVFSA 192          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|693496775|emb|CEG01687.1| (Domain of unknown function DUF547 [Ostreococcus tauri])

HSP 1 Score: 114.775 bits (286), Expect = 1.885e-24
Identity = 75/261 (28.74%), Postives = 117/261 (44.83%), Query Frame = 0
Query:   24 KRVLNDPNTFPPALVPSSSFASFPPSPPT-------------SSTNNVSLLIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEA 271
            +R++ D +   P ++   +   F    P+               + +   +++D+R R   +   FLS +G+ VDY  L  S  F  +++ +  L  +  + ALS +ER A F+N+YN LVIHA  +  A     ++  R  F+++  Y +GG   + DD+ENG+LRGNR                 P    +  L+  PS S  P             +    P         ++P+D RIHFAL CGA SCP IR Y A
Sbjct:  265 ERLIQDVDAAAPFVLDGDALFRFRSEAPSLGCAPLNCAKLYVGESRDAKSVVEDVRNRILKLYDEFLSADGRAVDYAGLRASAGFKDFVESSEELQRVN-LNALSREERIAFFINVYNALVIHATCVFGA---PKNTIERLDFFSKASYDIGGSTYTCDDIENGILRGNR-----------------PGAATIGALTGRPSLSRGP-------------FRAGDPRRNHV----VIPMDPRIHFALVCGARSCPPIRVYTA 487          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|942198696|ref|XP_014351759.1| (PREDICTED: uncharacterized protein LOC102347122 [Latimeria chalumnae])

HSP 1 Score: 110.538 bits (275), Expect = 3.138e-24
Identity = 70/211 (33.18%), Postives = 96/211 (45.50%), Query Frame = 0
Query:   61 LIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEA 271
            L + LRR    + G  LSP+GK VDY ++  S+ F  Y ++ T L  L  + +++ +E+ A F+N+YN LVIH         P  + W R  F+    Y +GG + +L D+ENG+LRGNR+    L +P  FS                             D     + P A P                IHFALNCGA  CPAIR Y A
Sbjct:   63 LSEALRRLILKLYGEHLSPDGKTVDYKAMENSQTFQEYCELATQLQRLE-LKSMTREEKLAFFINVYNALVIHGHI---KMGPPKNLWQRYKFFNGVSYLIGGEVFTLQDIENGVLRGNRKGVGQLTKP--FS---------------------------QGDQRLQVALPEAEP---------------LIHFALNCGAKGCPAIRSYSA 225          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|761908106|ref|XP_011403572.1| (PREDICTED: uncharacterized protein LOC105312537 [Amphimedon queenslandica])

HSP 1 Score: 108.997 bits (271), Expect = 5.338e-24
Identity = 68/201 (33.83%), Postives = 95/201 (47.26%), Query Frame = 0
Query:   72 MQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEAG 272
            ++G +LSP+G+ VDY  +  SE F  Y ++   L T+  +   + ++RKA F+N+YN L IH L      P  SS      F+  TCY +GG+ILSLDD+E+G+LR NR  P+P                                         +    P   S+ E L   +   D R+HFAL CGA SCPAI+ Y A 
Sbjct:   36 LKGLYLSPDGRGVDYGRIKESEEFNRYREIAKTLTTVDVMKESNEEQRKAFFINVYNSLTIHGLVDADVLP--SSVLEMKGFWRNTCYNIGGYILSLDDIEHGILRCNR--PHP-----------------------------------------SDETTPLFSSTDERLKLSLSSFDPRLHFALVCGAKSCPAIQVYSAN 191          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|1005422614|ref|XP_015767391.1| (PREDICTED: uncharacterized protein LOC107346125 isoform X2 [Acropora digitifera])

HSP 1 Score: 108.997 bits (271), Expect = 6.721e-24
Identity = 74/212 (34.91%), Postives = 106/212 (50.00%), Query Frame = 0
Query:   61 LIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTL-DSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEA 271
            L ++L++    ++G F+S +G  VDY +L  S+ F  Y++MT  L T   + +L   E+ A FLN+YN L IH L + ++  P S    SR  F+ RT Y +GG+I SLDD+E+G+LRGNR  P+P    S+F+           P   F  S+                                  +D RIHFAL CGA SCPAI+ + A
Sbjct:   35 LSKELQKLMLKIKGRFISEDGHTVDYNALKESDLFKEYVKMTAAL-TQVNLTSLERTEKIAFFLNIYNSLTIHGLAVCENGIPDSVLEISR--FWRRTAYNIGGYIFSLDDIEHGILRGNR--PHPSDGRSLFAEG--------DPRDQFVVSN----------------------------------VDPRIHFALVCGAKSCPAIQVFTA 199          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|1005422612|ref|XP_015767383.1| (PREDICTED: uncharacterized protein LOC107346125 isoform X1 [Acropora digitifera])

HSP 1 Score: 108.612 bits (270), Expect = 1.152e-23
Identity = 74/212 (34.91%), Postives = 106/212 (50.00%), Query Frame = 0
Query:   61 LIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTL-DSARPPSSSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYYEA 271
            L ++L++    ++G F+S +G  VDY +L  S+ F  Y++MT  L T   + +L   E+ A FLN+YN L IH L + ++  P S    SR  F+ RT Y +GG+I SLDD+E+G+LRGNR  P+P    S+F+           P   F  S+                                  +D RIHFAL CGA SCPAI+ + A
Sbjct:   35 LSKELQKLMLKIKGRFISEDGHTVDYNALKESDLFKEYVKMTAAL-TQVNLTSLERTEKIAFFLNIYNSLTIHGLAVCENGIPDSVLEISR--FWRRTAYNIGGYIFSLDDIEHGILRGNR--PHPSDGRSLFAEG--------DPRDQFVVSN----------------------------------VDPRIHFALVCGAKSCPAIQVFTA 199          
BLAST of EWM22984.1 vs. NCBI_GenBank
Match: gi|1191052650|ref|XP_020904224.1| (uncharacterized protein LOC110242557 [Exaiptasia pallida])

HSP 1 Score: 108.227 bits (269), Expect = 1.419e-23
Identity = 74/219 (33.79%), Postives = 105/219 (47.95%), Query Frame = 0
Query:   61 LIQDLRRRSRSMQGAFLSPNGKHVDYPSLLTSEAFASYLQMTTHLATLTGVGALSPDERKATFLNLYNCLVIHALTLDSARPPS--SSSWSRTSFYARTCYCVGGHILSLDDLENGLLRGNRRSPNPLARPSIFSAKHFPNLPILPPLSSFPSSSTFPPTNAPTDAPDAPSYPPASPSSPESLADWIVPLDARIHFALNCGANSCPAIRYY-EAGGEGG 276
            L +DL++    ++G+F+S +G+ +DY SL  S+ F  Y Q   H    T +  LS +E+ A FLN+YN L IH L + S +     +S      F+  T Y +GG+ LSLDD+E+G+LRGN+  P+P                                 ++PT     P +    P    +    I P+D RIHFAL CGA SCP I  Y E   E G
Sbjct:   27 LSKDLQKLMLRIKGSFMSDDGRGIDYASLKNSKLFEEY-QSLAHDLQGTAITVLSVEEKMAFFLNVYNALTIHGLAMSSHKDGHLPTSVLEIKQFWRNTAYNIGGYTLSLDDIEHGILRGNK--PHP---------------------------------SSPT-----PLFTKEDPRCELT----IKPMDPRIHFALVCGAKSCPPINVYSEKNLENG 200          
The following BLAST results are available for this feature:
BLAST of EWM22984.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103729|gb|EWM22984.1|0.000e+0100.00glycoside hydrolase 15-like protein [Nannochlorops... [more]
gi|923130263|ref|XP_013758597.1|1.414e-2537.24glutaredoxin [Thecamonas trahens ATCC 50062] >gi|9... [more]
gi|321459543|gb|EFX70595.1|6.619e-2532.17hypothetical protein DAPPUDRAFT_228243 [Daphnia pu... [more]
gi|1176120871|ref|XP_020631731.1|9.760e-2533.65uncharacterized protein LOC110068661 [Orbicella fa... [more]
gi|693496775|emb|CEG01687.1|1.885e-2428.74Domain of unknown function DUF547 [Ostreococcus ta... [more]
gi|942198696|ref|XP_014351759.1|3.138e-2433.18PREDICTED: uncharacterized protein LOC102347122 [L... [more]
gi|761908106|ref|XP_011403572.1|5.338e-2433.83PREDICTED: uncharacterized protein LOC105312537 [A... [more]
gi|1005422614|ref|XP_015767391.1|6.721e-2434.91PREDICTED: uncharacterized protein LOC107346125 is... [more]
gi|1005422612|ref|XP_015767383.1|1.152e-2334.91PREDICTED: uncharacterized protein LOC107346125 is... [more]
gi|1191052650|ref|XP_020904224.1|1.419e-2333.79uncharacterized protein LOC110242557 [Exaiptasia p... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7709rna7709Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications