rna7706, rna7706 (mRNA) Nannochloropsis gaditana

Overview
Namerna7706
Unique Namerna7706
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length762
Alignment locationCM002473.1:134430..135667 -

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Properties
Property NameValue
Productphenylalanyl-trna synthetase alpha chain
Orig transcript idgnl|cribi|Naga_101129g1.1201.mrna
Orig protein idgnl|cribi|Naga_101129g1.1201
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:134430..135667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101129g1gene7460Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7706rna7706-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22987.1cds7685Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7706 ID=rna7706|Name=rna7706|organism=Nannochloropsis gaditana|type=mRNA|length=762bp
TCCGGATTACTACGAGCGCGTGAAGCGCACGCACCAAGAGGGAGGCTACG
GCTCCATCGGCTACGGGTGCGCCTTTCAACGGGAGGAGGCGTTCAAGAAC
CTCCTGAGGACCCACACCACCGCGGTCTCCGCCCGCATGCTCTACCAGCT
CGCGACTCAACCGGGCGGCTTCAGTCCCCGGAAGTACTTCAGCATCGACC
GAGTCTTTCGAAACGAGAGCATGGATGCCACCCACCTCTGCGAGTTTCAT
CAGGTGGAAGGCCTGGTCGCGGACAGGAATTTGACCTTGGGGGACTTGAT
TGGCACCATTAAAACCTTCTTTGAACGCATCGGGATCACGGACCTCAAGT
TCAAGCCCGCCTACAACCCATACACAGAGCCGTCGATGGAGATCTTCGGC
TACCACCCCGACCTGAAAAAGTGGACGGAGATCGGGAACAGCGGCATGTT
CCGACCGGAAATGCTCCGGCCCATGGGGTTGCCGGAGGACGTGCGGGTCA
TCGCCTGGGGGCTCTCCCTAGAGCGACCTACCATGATCAAATACAGAATC
TCGAACATTCGGGAGCTTTTCGGGCACAAAGCGGCCCTGGACCGGACACG
CGCGGCGCCGATATGTCAATTCTAAGGCAGCAAAAAAAGACCGGTGGAGG
GGTTCAAAAGCAATGTATGACGTTGAAATGACGCCGGTCAGGCCGACACA
GCAGGGCCGATGCGATGTGTATCCTCTGAACGTTCATTTGCTTGCCATTG
AGAGCCTAGCCA
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protein sequence of rna7706

>rna7706-protein ID=rna7706-protein|Name=rna7706|organism=Nannochloropsis gaditana|type=polypeptide|length=239bp
MDESTFLQLFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLE
LTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGK
DCVKIGMGPLMKAKAVRKEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQ
AQGLSEEVVKTLRKRQLVTQVTRKSFSVHPWRPRPGRLFPSLVESPCSVP
PDPAGHGLHGDADEQVGRVFLLELRRPLPAPVPPGAGRS
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mRNA from alignment at CM002473.1:134430..135667-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7706 ID=rna7706|Name=rna7706|organism=Nannochloropsis gaditana|type=mRNA|length=1238bp|location=Sequence derived from alignment at CM002473.1:134430..135667- (Nannochloropsis gaditana)
ATGGACGAAAGCACTTTTCTGCAGCTCTTCCAGCAGGAAGGAGGTGAGGA
TGGCATACCCGACTCTTTCCTGTTTGCAGCTGCGCATGCGGCCGATCATC
AAGCTCTGATAGGTCTCCTCAACTCCCTTGCTGCCGATGGCCTGTTGGAA
CTCACCTCCCGGGCCAGCACGTTCCTCGAACTCACTGAGGAAGGGAAGAA
AGTGCTTGCCGACGGTTCCCCCGAAGCCAAGGTGTTCGCTGCCATCAGTC
CTACAGGGGAGGGCACTACTCAGGAGGCACTCTTGAAGGCCTTGGGAAAG
GACTGCGTCAAGATCGGCATGGGGCCTTTGATGAAAGCCAAAGCGGTCCG
AAAGGAAGGCGATAAACTCGTGCGGGCCGTGCCTGAATTCCAGGACGGGA
CTCAAGCCGTATTGCGGCAAGTGACGGGCCAGGAAGGGAAGGAAGGACAG
GCTCAAGGCCTGTCGGAGGAGGTGGTCAAGACGCTGCGGAAGCGGCAGCT
CGTCACGCAGGTGAAGGCGTCGATGGGCACGATATAGGGAGGCTGAGAGG
TGGGAGGGACTGCCGAAGGCCCTGGTTTCCCGGGTAGCCTTTGCCCACCT
CCTCACTCTCCCTCCCTTTCCCCTTATGCCTTGTGGGACAGGTCACTCGA
AAATCGTTTTCCGTCCGTCGCGGGCCGCATTTCGCCCTCCAACGGACCAA
AAAAGCGGCCGAGCTGACTAAGGAGATGCTTGACTCCGGGGAGTGGCGCA
CCACGGCCTTCAAAAGCTACAATTTCCAGACCCTTGGCGCCCCCGTCCAG
GGCGGTTATTTCCATCCCTTGTTGAAAGTGCGTGCCCGCGGACCGCCCCT
CTCTTTCTCTCTCCCTCCCGCCCTCCCTCCCTTCCTCGTCCCCACAGCCA
TGTTTCCTCCCGACCTGACATCCTTGATCATGGTCCCGTTCCCCTGGTGC
TCCCCTGGAGGCCGCCCTCCCTCCCTGCCTCCCTCTCGCCCTCCCTCTCT
TCCTCCCCCTTATCGCCCCCCCGACCCTCACCTACACGCTTCTCTGCCTT
TTTTTTCTTCCCTCTCGCACCGGTTGCGCCTCCGTCCCCTCCCTCGGATA
GGTCCGTGCTCAGTTCCGCCAGATCCTGCTGGCCATGGGCTTCACGGAGA
TGCCGACGAACAAGTGGGTCGAGTCTTCCTTCTGGAACTTCGACGCCCTC
TTCCAGCCCCAGTCCCACCCGGCGCGGGACGCTCATGA
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Coding sequence (CDS) from alignment at CM002473.1:134430..135667-

>rna7706 ID=rna7706|Name=rna7706|organism=Nannochloropsis gaditana|type=CDS|length=2880bp|location=Sequence derived from alignment at CM002473.1:134430..135667- (Nannochloropsis gaditana)
GTCCGTGCTCAGTTCCGCCAGATCCTGCTGGCCATGGGCTTCACGGAGAT
GCCGACGAACAAGTGGGTCGAGTCTTCCTTCTGGAACTTCGACGCCCTCT
TCCAGCCCCAGTCCCACCCGGCGCGGGACGCTCATGAACCCTTGGCGCCC
CCGTCCAGGGCGGTTATTTCCATCCCTTGTTGAAAGTCACTCGAAAATCG
TTTTCCGTCCATGGACGAAAGCACTTTTCTGCAGCTCTTCCAGCAGGAAG
GAGGTGAGGATGGCATACCCGACTCTTTCCTGTTTGCAGCTGCGCATGCG
GCCGATCATCAAGCTCTGATAGGTCTCCTCAACTCCCTTGCTGCCGATGG
CCTGTTGGAACTCACCTCCCGGGCCAGCACGTTCCTCGAACTCACTGAGG
AAGGGAAGAAAGTGCTTGCCGACGGTTCCCCCGAAGCCAAGGTGTTCGCT
GCCATCAGTCCTACAGGGGAGGGCACTACTCAGGAGGCACTCTTGAAGGC
CTTGGGAAAGGACTGCGTCAAGATCGGCATGGGGCCTTTGATGAAAGCCA
AAGCGGTCCGAAAGGAAGGCGATAAACTCGTGCGGGCCGTGCCTGAATTC
CAGGACGGGACTCAAGCCGTATTGCGGCAAGTGACGGGCCAGGAAGGGAA
GGAAGGACAGGCTCAAGGCCTGTCGGAGGAGGTGGTCAAGACGCTGCGGA
AGCGGCAGCTCGTCACGCAGGTCCGTGCTCAGTTCCGCCAGATCCTGCTG
GCCATGGGCTTCACGGAGATGCCGACGAACAAGTGGGTCGAGTCTTCCTT
CTGGAACTTCGACGCCCTCTTCCAGCCCCAGTCCCACCCGGCGCGGGACG
CTCATGAACCCTTGGCGCCCCCGTCCAGGGCGGTTATTTCCATCCCTTGT
TGAAAGTCACTCGAAAATCGTTTTCCGTCCATGGACGAAAGCACTTTTCT
GCAGCTCTTCCAGCAGGAAGGAGGTGAGGATGGCATACCCGACTCTTTCC
TGTTTGCAGCTGCGCATGCGGCCGATCATCAAGCTCTGATAGGTCTCCTC
AACTCCCTTGCTGCCGATGGCCTGTTGGAACTCACCTCCCGGGCCAGCAC
GTTCCTCGAACTCACTGAGGAAGGGAAGAAAGTGCTTGCCGACGGTTCCC
CCGAAGCCAAGGTGTTCGCTGCCATCAGTCCTACAGGGGAGGGCACTACT
CAGGAGGCACTCTTGAAGGCCTTGGGAAAGGACTGCGTCAAGATCGGCAT
GGGGCCTTTGATGAAAGCCAAAGCGGTCCGAAAGGAAGGCGATAAACTCG
TGCGGGCCGTGCCTGAATTCCAGGACGGGACTCAAGCCGTATTGCGGCAA
GTGACGGGCCAGGAAGGGAAGGAAGGACAGGCTCAAGGCCTGTCGGAGGA
GGTGGTCAAGACGCTGCGGAAGCGGCAGCTCGTCACGCAGGTCCGTGCTC
AGTTCCGCCAGATCCTGCTGGCCATGGGCTTCACGGAGATGCCGACGAAC
AAGTGGGTCGAGTCTTCCTTCTGGAACTTCGACGCCCTCTTCCAGCCCCA
GTCCCACCCGGCGCGGGACGCTCATGAACCCTTGGCGCCCCCGTCCAGGG
CGGTTATTTCCATCCCTTGTTGAAAGTCACTCGAAAATCGTTTTCCGTCC
ATGGACGAAAGCACTTTTCTGCAGCTCTTCCAGCAGGAAGGAGGTGAGGA
TGGCATACCCGACTCTTTCCTGTTTGCAGCTGCGCATGCGGCCGATCATC
AAGCTCTGATAGGTCTCCTCAACTCCCTTGCTGCCGATGGCCTGTTGGAA
CTCACCTCCCGGGCCAGCACGTTCCTCGAACTCACTGAGGAAGGGAAGAA
AGTGCTTGCCGACGGTTCCCCCGAAGCCAAGGTGTTCGCTGCCATCAGTC
CTACAGGGGAGGGCACTACTCAGGAGGCACTCTTGAAGGCCTTGGGAAAG
GACTGCGTCAAGATCGGCATGGGGCCTTTGATGAAAGCCAAAGCGGTCCG
AAAGGAAGGCGATAAACTCGTGCGGGCCGTGCCTGAATTCCAGGACGGGA
CTCAAGCCGTATTGCGGCAAGTGACGGGCCAGGAAGGGAAGGAAGGACAG
GCTCAAGGCCTGTCGGAGGAGGTGGTCAAGACGCTGCGGAAGCGGCAGCT
CGTCACGCAGGTCCGTGCTCAGTTCCGCCAGATCCTGCTGGCCATGGGCT
TCACGGAGATGCCGACGAACAAGTGGGTCGAGTCTTCCTTCTGGAACTTC
GACGCCCTCTTCCAGCCCCAGTCCCACCCGGCGCGGGACGCTCATGAACC
CTTGGCGCCCCCGTCCAGGGCGGTTATTTCCATCCCTTGTTGAAAGTCAC
TCGAAAATCGTTTTCCGTCCATGGACGAAAGCACTTTTCTGCAGCTCTTC
CAGCAGGAAGGAGGTGAGGATGGCATACCCGACTCTTTCCTGTTTGCAGC
TGCGCATGCGGCCGATCATCAAGCTCTGATAGGTCTCCTCAACTCCCTTG
CTGCCGATGGCCTGTTGGAACTCACCTCCCGGGCCAGCACGTTCCTCGAA
CTCACTGAGGAAGGGAAGAAAGTGCTTGCCGACGGTTCCCCCGAAGCCAA
GGTGTTCGCTGCCATCAGTCCTACAGGGGAGGGCACTACTCAGGAGGCAC
TCTTGAAGGCCTTGGGAAAGGACTGCGTCAAGATCGGCATGGGGCCTTTG
ATGAAAGCCAAAGCGGTCCGAAAGGAAGGCGATAAACTCGTGCGGGCCGT
GCCTGAATTCCAGGACGGGACTCAAGCCGTATTGCGGCAAGTGACGGGCC
AGGAAGGGAAGGAAGGACAGGCTCAAGGCCTGTCGGAGGAGGTGGTCAAG
ACGCTGCGGAAGCGGCAGCTCGTCACGCAG
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Synonyms
Publications