EWM22987.1, cds7685 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|585103736|gb|EWM22987.1| (phenylalanyl-trna synthetase alpha chain [Nannochloropsis gaditana]) HSP 1 Score: 476.093 bits (1224), Expect = 8.712e-170 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0 Query: 1 MDESTFLQLFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVRKEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSVHPWRPRPGRLFPSLVESPCSVPPDPAGHGLHGDADEQVGRVFLLELRRPLPAPVPPGAGRS 239 MDESTFLQLFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVRKEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSVHPWRPRPGRLFPSLVESPCSVPPDPAGHGLHGDADEQVGRVFLLELRRPLPAPVPPGAGRS Sbjct: 1 MDESTFLQLFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVRKEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSVHPWRPRPGRLFPSLVESPCSVPPDPAGHGLHGDADEQVGRVFLLELRRPLPAPVPPGAGRS 239
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|553185528|ref|XP_005854261.1| (phenylalanyl-trna synthetase alpha chain [Nannochloropsis gaditana CCMP526] >gi|422294796|gb|EKU22096.1| phenylalanyl-trna synthetase alpha chain [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 333.954 bits (855), Expect = 2.229e-114 Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0 Query: 1 MDESTFLQLFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVRKEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQV 171 MDESTFLQLFQQEG EDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVRKEGDKLVRAVPEFQDGTQAVLRQ+TGQEGKEGQAQGLSEEVVKTLRKRQLVTQV Sbjct: 5 MDESTFLQLFQQEGSEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVRKEGDKLVRAVPEFQDGTQAVLRQLTGQEGKEGQAQGLSEEVVKTLRKRQLVTQV 175
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|224001682|ref|XP_002290513.1| (phenylalanyl-trna synthetase [Thalassiosira pseudonana CCMP1335] >gi|220973935|gb|EED92265.1| phenylalanyl-trna synthetase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 102.064 bits (253), Expect = 2.194e-21 Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 0 Query: 19 IPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGE-GTTQEALLKALGKDCVKIGMGPLMKAKAVRKEGD-KLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSV 178 IPD+ +FA AH+ H ++G SL+ D + L+ +S F LT E + +LA+GS E V AA+ GE G + L +GKD KIGMG +K K RKE D +LV V +D + + + G A L ++ + L++R+L+T VTRKS+++ Sbjct: 19 IPDTLVFAEAHSLSHNTIVGTSKSLSTDAYISLSELSSQFYTLTTEAESILANGSQECIVIAALIAAGEDGLSMTDLQNGVGKDVCKIGMGNCLKNKWARKEKDGRLVAQVEGVEDEVKV---LLGKLKEGGGGADVLDDKAIAILKRRKLITLVTRKSYTI 177
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|301123667|ref|XP_002909560.1| (phenylalanyl-tRNA synthetase alpha chain [Phytophthora infestans T30-4] >gi|262100322|gb|EEY58374.1| phenylalanyl-tRNA synthetase alpha chain [Phytophthora infestans T30-4]) HSP 1 Score: 97.8265 bits (242), Expect = 7.514e-20 Identity = 57/172 (33.14%), Postives = 95/172 (55.23%), Query Frame = 0 Query: 9 LFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVR--KEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSV 178 L Q G E + D++ F+ ++ H+ ++G++ SL D + T R+++F L +E LA GSPE +VF AIS EG ++ L A+G +K+G G MK K +R K K R V + +D +LR+V + +G +S++ TL++R+L TRKS+++ Sbjct: 14 LLQTIGSEGSVADTYDFSLSNGLSHELVVGVMKSLLVDAFVADTERSTSFYVLKDEANSFLAQGSPEIQVFHAIS--AEGVDRKTLEAAVGAATLKVGQGACMKNKWIRLDKADGKFYRNVDDVKDEVTEMLRRV---QQADGALSAVSKDEANTLKRRKLAEVRTRKSYTL 180
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|970650028|gb|KUF89153.1| (Phenylalanine--tRNA ligase alpha subunit [Phytophthora nicotianae]) HSP 1 Score: 97.8265 bits (242), Expect = 8.444e-20 Identity = 59/172 (34.30%), Postives = 94/172 (54.65%), Query Frame = 0 Query: 9 LFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVR--KEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSV 178 L Q G E + D++ FA A+ H+ ++G++ SL D + T R+++F L +E + L GSPE +VF AI EG ++ L A+G +K+G G MK K +R K K R V E +D +LR+V E +G +S++ TL++R+L TRKS+++ Sbjct: 14 LLQTIGSEGSVADTYEFALANGLSHELVVGVMKSLLVDAFVADTERSTSFYVLKDEARSFLEQGSPEIQVFRAIP--AEGVDRKTLEAAVGAATLKVGQGACMKNKWIRLDKADGKFYRNVEEVKDEVTEMLRRV---EQADGALSTVSKDEANTLKRRKLAEVRTRKSYAL 180
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|675188721|ref|XP_008903245.1| (phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica INRA-310] >gi|566027877|gb|ETI50788.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica P1569] >gi|567965206|gb|ETK90679.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica] >gi|567993920|gb|ETL44086.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica] >gi|568023196|gb|ETL97258.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica] >gi|568053585|gb|ETM50409.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica] >gi|568096699|gb|ETN11446.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica INRA-310] >gi|570331580|gb|ETO79528.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica P1976] >gi|570955393|gb|ETP20558.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica CJ01A1] >gi|570990562|gb|ETP48486.1| phenylalanine-tRNA ligase, alpha subunit [Phytophthora parasitica P10297] >gi|970654922|gb|KUF93163.1| hypothetical protein AM588_10004000 [Phytophthora nicotianae]) HSP 1 Score: 97.8265 bits (242), Expect = 8.779e-20 Identity = 59/172 (34.30%), Postives = 94/172 (54.65%), Query Frame = 0 Query: 9 LFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVR--KEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSV 178 L Q G E + D++ FA A+ H+ ++G++ SL D + T R+++F L +E + L GSPE +VF AI EG ++ L A+G +K+G G MK K +R K K R V E +D +LR+V E +G +S++ TL++R+L TRKS+++ Sbjct: 14 LLQTIGSEGSVADTYEFALANGLSHELVVGVMKSLLVDAFVADTERSTSFYVLKDEARSFLEQGSPEIQVFRAIP--AEGVDRKTLEAAVGAATLKVGQGACMKNKWIRLDKADGKFYRNVEEVKDEVTEMLRRV---EQADGALSTVSKDEANTLKRRKLAEVRTRKSYAL 180
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|397567346|gb|EJK45534.1| (hypothetical protein THAOC_35851, partial [Thalassiosira oceanica]) HSP 1 Score: 93.5893 bits (231), Expect = 1.090e-19 Identity = 60/170 (35.29%), Postives = 94/170 (55.29%), Query Frame = 0 Query: 14 GGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTG-EGTTQEALLKALGKDCVKIGMGPLMKAKAVRKE---GDKLVRAVPEFQDGTQAVLRQVTGQEGKEG-QAQGLSEEVVKTLRKRQLVTQVTRKSFSV 178 G + I DSF FA ++ DH A++G SL D + L+ ++ F L +E + ++ +GS E +V A+ G EG T L + +GKD KIGMG MK K +K+ G + A + QDG + L + Q EG A L ++ +K L++R+LV+ +TRKS+ + Sbjct: 14 GADASIADSFAFAGSNGLDHNAVVGASKSLQGDAYVSLSELSTQFYVLGKEAEDIVKNGSQEIRVLGALIEAGDEGLTIPELQEKVGKDVSKIGMGNCMKLKWAKKDKASGKLIAAAGSDTQDGVKEQLSAL--QNAPEGDNANVLDDKTLKDLKRRKLVSLITRKSYKI 181
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|299472119|emb|CBN77104.1| (Phenylalanine--tRNA ligase [Ectocarpus siliculosus]) HSP 1 Score: 97.0561 bits (240), Expect = 1.334e-19 Identity = 62/165 (37.58%), Postives = 93/165 (56.36%), Query Frame = 0 Query: 19 IPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVRK-EGDKLVRAVP----EFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSV 178 I D++ FA A H +G+L SL A+ +L+ +T+ ++ EG++V+ +GSPE +V + +G ++ L ALG D VKIG+G MK K V K EG LVR +D + +L++V G E L ++ K L++R+LVTQVTRKSF V Sbjct: 25 IADTWGFAEAMGCPHTETVGVLISLEAEEMLKSKKLETTYFVVSAEGQRVIEEGSPEMRVLECVPVGSDGISKAGLEAALGADVVKIGLGQCMKNKWVAKGEGGVLVRGANGGDGAVEDAAKELLKKVEGGE-------TLGDQQAKDLKRRKLVTQVTRKSFKV 182
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|1032155049|gb|OAO18244.1| (phenylalanyl-tRNA synthetase alpha chain [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 95.9005 bits (237), Expect = 3.776e-19 Identity = 65/178 (36.52%), Postives = 96/178 (53.93%), Query Frame = 0 Query: 3 ESTFLQLFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVRKEGDK--LVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSV 178 E LQ ++G I +S+ FAA+ DHQA++G++ SL D L++ + F ELTEE V+ +GSPE +V +I EG +AL+ A+GKD KIG MK K V+K+ +V V E D Q L+++ G + S E K L +RQ+VT +TRK + + Sbjct: 6 EKVLLQTVNEKGE---IENSYAFAASLNVDHQAVVGVIKSLETDLLIKTEQLSEQFWELTEEALAVIENGSPELRVMKSIP--AEGIANDALMAAVGKDLYKIGFSYCMKNKWVKKDKATGMIVPLVAEPVDELQMQLKELKETGGSVAKIAAGSAE-GKQLVRRQMVTLITRKFYKI 177
BLAST of EWM22987.1 vs. NCBI_GenBank
Match: gi|953501335|emb|CEG37336.1| (phenylalanine-trna alpha subunit [Plasmopara halstedii]) HSP 1 Score: 95.1301 bits (235), Expect = 6.296e-19 Identity = 59/178 (33.15%), Postives = 96/178 (53.93%), Query Frame = 0 Query: 3 ESTFLQLFQQEGGEDGIPDSFLFAAAHAADHQALIGLLNSLAADGLLELTSRASTFLELTEEGKKVLADGSPEAKVFAAISPTGEGTTQEALLKALGKDCVKIGMGPLMKAKAVR--KEGDKLVRAVPEFQDGTQAVLRQVTGQEGKEGQAQGLSEEVVKTLRKRQLVTQVTRKSFSV 178 E+ LQ EG + D++ F+ A+ H+ ++G++ SL D + T R+++F L +E K L GSPE +VF AI P EG ++ L A+G +K+G G MK K +R K K R + D +LR+V E +G +S++ TL++R+L+ TRKS+++ Sbjct: 11 EALLLQTISNEGS---VADTYDFSLANNLSHELVVGVMKSLLVDAFVADTERSTSFYVLKDEAKIFLDHGSPEIQVFRAI-PV-EGVDRKTLEAAIGAATLKVGQGACMKNKWIRLDKADGKFYRNTEQADDNVTEMLRRV---EQADGAISAISQDEANTLKRRKLIETRTRKSYTL 180 The following BLAST results are available for this feature:
BLAST of EWM22987.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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