EWM22996.1, cds7678 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|585103755|gb|EWM22996.1| (p-hydroxybenzoic acid efflux pump subunit aaeb, partial [Nannochloropsis gaditana]) HSP 1 Score: 1117.45 bits (2889), Expect = 0.000e+0 Identity = 549/549 (100.00%), Postives = 549/549 (100.00%), Query Frame = 0 Query: 1 EKAGGARDDPRRGGLRNSQEAMMEGTKGGERRHGDGNEASEEKAPAPATSSSIPSSPGTSPRPALPSFPSPTPTPCSPTTSPPSPPLSLPPSAPLSLPPFARALEMARQPLKVALAYVLVTLTMLILTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGEAGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARVSLFMAMLIRASQNFPLEISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTEREEWREEEEGEEYETETEGQGRCSAVMPLGDGGDLPPPQPREGRASSHGAHRESSGHRPTRSAALPPDTVPALALLQLGEAYVKIQDWVDGYFEEHIKGNWANDHLVLVSADLILSLNGMIFAVEALGQGLLGVGHALRELVEREKGNYYML 549 EKAGGARDDPRRGGLRNSQEAMMEGTKGGERRHGDGNEASEEKAPAPATSSSIPSSPGTSPRPALPSFPSPTPTPCSPTTSPPSPPLSLPPSAPLSLPPFARALEMARQPLKVALAYVLVTLTMLILTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGEAGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARVSLFMAMLIRASQNFPLEISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTEREEWREEEEGEEYETETEGQGRCSAVMPLGDGGDLPPPQPREGRASSHGAHRESSGHRPTRSAALPPDTVPALALLQLGEAYVKIQDWVDGYFEEHIKGNWANDHLVLVSADLILSLNGMIFAVEALGQGLLGVGHALRELVEREKGNYYML Sbjct: 1 EKAGGARDDPRRGGLRNSQEAMMEGTKGGERRHGDGNEASEEKAPAPATSSSIPSSPGTSPRPALPSFPSPTPTPCSPTTSPPSPPLSLPPSAPLSLPPFARALEMARQPLKVALAYVLVTLTMLILTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGEAGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARVSLFMAMLIRASQNFPLEISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTEREEWREEEEGEEYETETEGQGRCSAVMPLGDGGDLPPPQPREGRASSHGAHRESSGHRPTRSAALPPDTVPALALLQLGEAYVKIQDWVDGYFEEHIKGNWANDHLVLVSADLILSLNGMIFAVEALGQGLLGVGHALRELVEREKGNYYML 549
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|585113186|gb|EWM30522.1| (hypothetical protein Naga_100013g27 [Nannochloropsis gaditana]) HSP 1 Score: 166.777 bits (421), Expect = 4.315e-40 Identity = 85/176 (48.30%), Postives = 117/176 (66.48%), Query Frame = 0 Query: 108 RQPLKVALAYVLVTLTMLI---LTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGEAGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIF 280 RQPLKVALA +L ++ +L G +T W I V Q++SSHP S+FK+G R+QGTVLG + G+ V W + +A+V LT WVF CAF+R S YGE A A +TAPII++GP++G +GA++RI Q ILG+ IYV VDN+ +P RAK+ LR +L S+ +L +IF Sbjct: 748 RQPLKVALAILLASIVVLADDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANRVQGTVLGAVMGMAVTTWAPVVNKVAIVFILTAWVFVCAFSRGSRTYGEAATSAGLTAPIIVIGPVVGSSGAVVRISQVILGTVIYVGVDNLIFPTRAKILLRSQLCESVEKLGNLCRDGLAIF 923
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|1026767036|gb|OAE27406.1| (hypothetical protein AXG93_2015s1350 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 113.235 bits (282), Expect = 1.473e-22 Identity = 80/281 (28.47%), Postives = 139/281 (49.47%), Query Frame = 0 Query: 105 EMARQPLKVALAYVLVTLTMLILTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILG---EAGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVH---AIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARVSLFMAMLIRASQNFPLE-ISERDRALLTSIQEAVQELE 378 E A + KV+LA L L + W +++V + + G SF+ R+QGTVLG ++ ++LN + L ++L+L WV ++ R S L+G ++A +TA I+++G G + A++RI Q +G + V+ + WP RA + RREL+ SL RD +++ P H + +++ + A A Q + V EPELW PF A+ Y K+ +R+ + ++ + E +SE+ R L+ +Q ++ LE Sbjct: 704 EQALRAFKVSLAMSLAALAGCMYNEAYAFWAMVSVAFIMQNQQGGSFRMANLRLQGTVLGSIYAYLMLNLMSKHPQL-LLLALVPWVVLLSYLRFSKLFGASGVIAGLTAAIVMLGAEGGMSIQQLAVVRITQNFIGVLALILVETIIWPERAVILSRRELVLSLIDLRDCVKAVVAVY-TGHHCPEHRKLVVLDIKKLEGQIRARIADQTILQSEVVMEPELWSHPFPAEIYSKLLHIQSRMHDLLHFMVCSLHAATEECLSEQIRKLVGPLQTSLVALE 982
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|1026763400|gb|OAE24457.1| (hypothetical protein AXG93_1615s1100 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 107.071 bits (266), Expect = 1.403e-20 Identity = 88/324 (27.16%), Postives = 156/324 (48.15%), Query Frame = 0 Query: 107 ARQPLKVALAYVLV-TLTMLILTG-PRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGE--AGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQK--TDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALAR---VSLFMAMLIRASQNFPL-----EISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTEREEW-REEEEGEEYETETE 415 AR+ K+AL+ V+ T LI++ + W + V + ++ G S++ R+QGTVLG ++G + L + + + A +L+L WV +F R S YG L++A TA ++++G + AM RI +T +G +VFV+ V +P RA L +R+EL++SL RD +++ ++ D A+ + + L AS Q A EP+LW PF + Y + R + FM + A+ L ++ E R LT++QE V L + + + +E+ ++ + G + ++ E Sbjct: 559 ARRSFKIALSMVMAATFGNLIVSQEAHSFWATVTVGFIIGNYQGGSWRISSLRLQGTVLGAIYGYLALR-VSKNHSWANLLALIPWVVLSSFVRYSTAYGYSGLVSAFTAAVLILGGFENDIRKYAMDRITETFVGVLSFVFVETVVFPERAVLLVRKELVSSLIGLRDCVAAIVAVYTEQECLDCRSIAVHEIKELEQQLRASFVKQSALRAEACLEPDLWFVPFPGEVYSNLIAIEGRMLDLLFFMVCSLHATTEDCLTEQMQKLLEPLRTSLTALQEEVLSTIDSLQQVLQLKVQGTGKWSRMKEFLKDLKRGSSFNSDVE 881
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|1026761894|gb|OAE23258.1| (hypothetical protein AXG93_620s1250 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 100.908 bits (250), Expect = 1.360e-18 Identity = 104/429 (24.24%), Postives = 187/429 (43.59%), Query Frame = 0 Query: 134 WGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGE---AGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQK---TDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVA---KALARVSLFMAMLIRASQNFPLEISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTEREEWREEEEGEEYETETEGQGRCSA---------VMPLGDGGDLPPPQPREGRA-SSHGAHRESSGHRPTRSAALPPDTVPALALLQLGEAYVKIQDWVDGYFEEHIKGNWANDHLVLVSADLILSLNGMIFAVEALGQGLLGVGHALRELVEREK 543 W I V + + G +F+ RIQGT +G +FG +V++ L ++ + L L GWV F + R S +G L++A+TA I+++G G+ A AM RI T +G +V V+ + P RA + +R ELL SL RD +++ A++ Q++ +TA Q + AV EP+LW P + Y +V K + + FM ++AS + E + LL ++ ++ LE +D + + + + +W + + G C+ LG ++ P R RA + G R S G P R + + + + + D + + ++ D V VS ++LS++ + F + +L + + + A+ EL++ E Sbjct: 574 WAPITVSFIIGNLQGGAFRLASLRIQGTAVGSIFGYLVVSEL-YNHKYILPLILAGWVSFSDYIRYSKTHGYSGLVSALTAAILMVGDFDGQDIKAFAMDRIAMTFIGVACFVLVETLLLPERAVVLVREELLQSLKRLRDCVAAIVAVYTSHEVCLKCRTSAVKDMQKLEQQITAGLVAQTSLNNEAVLEPDLWFVPHPGEVYTRVISIQKRMLDLLFFMVCSLQASTEDWSD--EHMQKLLKPLRSSLTALEDEVLATVDSLQKLLEKTNKSWDWLPSP--KTLLSAFRGGVPCAGDVERQRPGRRRRLGSVAEVFQPSRRASRALLALGHRRRSIGGTPIRLKT---------TMDRFEQTFESVLDELMAAHSKTVESGGGGDGNV-VSNSVMLSISSLSFCLHSLLKETVDLEKAVWELLQAEN 987
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|1026757173|gb|OAE19487.1| (hypothetical protein AXG93_1040s1510 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 100.523 bits (249), Expect = 1.733e-18 Identity = 67/239 (28.03%), Postives = 123/239 (51.46%), Query Frame = 0 Query: 109 QPLKVALAYVLVTLTMLILTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMG----PILGEAGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVHAIQTA--QRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARV 341 + LK++LA + L ++ W ++ V + +H G SF+ R+QGTV+G ++ +++ + D V+++L WV ++ R S L+G ++A +TA I+++G PI + A+ RI + +G +FV+++ +P RA + R+EL++SL RD + + D I + +++ A L + A Q AV EPELW+ PF A+ Y ++ R+ Sbjct: 556 RALKISLAMAIAALAGILYNKKFAFWAVVTVGFIIQNHQGGSFRMANLRLQGTVIGSIYAYLMVIVIH-DHPDFVLVALIPWVVVLSYLRFSKLFGAAGVIAGLTAAIVMLGSNGAPI--QELAVTRITENFIGVLALIFVESLVFPDRAAILCRKELVSSLVDLRDCVKAVVAAYTGHFCDEHRRIVASDIKKLEAQLRSRIAEQSKLQAEAVMEPELWNVPFPAEIYGQLVNIQTRM 791
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|734340615|gb|KHN09420.1| (hypothetical protein glysoja_016519 [Glycine soja]) HSP 1 Score: 94.3597 bits (233), Expect = 1.234e-16 Identity = 67/267 (25.09%), Postives = 128/267 (47.94%), Query Frame = 0 Query: 136 LIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGE---AGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARVSLFMAMLIRASQNFPLEISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTERE 399 LIA+C HP +F R QGT +G ++GI+ + + + L L W+FF +F + S +YG+ +AAVT ++++G + A+ R+ + +G +V V+ +F P RA + EL L +D G+ I K + P + Q + L + E + A EP W PFH YRK+ ++L++++ + + +++N L +S+++ A + + V + R+ + + E + +T ++ Sbjct: 386 LIALCFVPGRHP--TFSLANARGQGTAMGSIYGILCCFVFKKIVDFSF-LPLLPWIFFSSFLKYSRMYGQAGGIAAVTGALLVVGMKHNDPPSQFALARMVEATIGLLCFVIVEIIFNPCRAATLAKSELSQCLRSLQDCIGQIAIITPTKREMPFSSCQELREGQKKLKSLVCQLEEFTAEAELEPNFWFIPFHNACYRKMLESLSKMADLLLFVAYSTENIML-LSQKNGAFWVDLHDGVNKNVRIFKNKVSPTLEHLEEITRKK 648
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|947119283|gb|KRH67532.1| (hypothetical protein GLYMA_03G171200 [Glycine max]) HSP 1 Score: 92.4337 bits (228), Expect = 3.405e-16 Identity = 67/267 (25.09%), Postives = 126/267 (47.19%), Query Frame = 0 Query: 136 LIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGE---AGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARVSLFMAMLIRASQNFPLEISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTERE 399 LIA+C HP +F R QGT +G ++GI+ + + + L L W+FF +F + S +YG+ +AAVT ++++G + A+ R+ + +G +V V+ +F P RA + EL L D G+ I K + P + Q + L + E + A EP W PFH YRK+ ++L++++ + + + +N L +S+++ A + + V + R+ + + E + +T ++ Sbjct: 199 LIALCFVPGRHP--TFSLANARGQGTAMGSIYGILCCFVFKKIVDFSF-LPLLPWIFFSSFLKYSRMYGQAGGIAAVTGALLVVGMKHNDPPSQFALARMVEATIGLLCFVIVEIIFNPCRAATLAKSELSQCLRSLHDCIGQIAIITPTKREMPFSSCQELREGQKKLKSLVCQLEEFTAEAELEPNFWFIPFHNACYRKMLESLSKMADLLLFVAYSMENIML-LSQKNGAFGVDLHDGVNKNVRIFKNKVSPTLEHLEEITRKK 461
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|947119282|gb|KRH67531.1| (hypothetical protein GLYMA_03G171200 [Glycine max]) HSP 1 Score: 92.8189 bits (229), Expect = 3.809e-16 Identity = 67/267 (25.09%), Postives = 126/267 (47.19%), Query Frame = 0 Query: 136 LIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGE---AGAMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVHAIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRKVAKALARVSLFMAMLIRASQNFPLEISERDRALLTSIQEAVQELERMTAHALDQAWEAVARMTERE 399 LIA+C HP +F R QGT +G ++GI+ + + + L L W+FF +F + S +YG+ +AAVT ++++G + A+ R+ + +G +V V+ +F P RA + EL L D G+ I K + P + Q + L + E + A EP W PFH YRK+ ++L++++ + + + +N L +S+++ A + + V + R+ + + E + +T ++ Sbjct: 427 LIALCFVPGRHP--TFSLANARGQGTAMGSIYGILCCFVFKKIVDFSF-LPLLPWIFFSSFLKYSRMYGQAGGIAAVTGALLVVGMKHNDPPSQFALARMVEATIGLLCFVIVEIIFNPCRAATLAKSELSQCLRSLHDCIGQIAIITPTKREMPFSSCQELREGQKKLKSLVCQLEEFTAEAELEPNFWFIPFHNACYRKMLESLSKMADLLLFVAYSMENIML-LSQKNGAFGVDLHDGVNKNVRIFKNKVSPTLEHLEEITRKK 689
BLAST of EWM22996.1 vs. NCBI_GenBank
Match: gi|971506935|dbj|GAQ91269.1| (hypothetical protein KFL_007550015 [Klebsormidium nitens]) HSP 1 Score: 90.1225 bits (222), Expect = 3.855e-15 Identity = 74/265 (27.92%), Postives = 117/265 (44.15%), Query Frame = 0 Query: 97 LPPFARALEMARQPLKVALAYVLVTLTMLILTGPRTPWGLIAVCQSLSSHPGSSFKAGLQRIQGTVLGGMFGIVVLNWLQWDSNLAVVLSLTGWVFFCAFNRLSPLYGEVALMAAVTAPIILMGPILGEAG----AMIRIQQTILGSFIYVFVDNVFWPVRAKLDLRRELLTSLGLFRDLWGRTFSIFLQKTDDPVH--AIQTAQRVHAALTASCAMQETYITLAVDEPELWHKPFHAQAYRK---VAKALARVSLFMAMLIRAS 352 P AR L+ KVA A + L +I W ++ + + + G+SF+A R+QGTV G ++G +V+ + +AV L WV F R S YG ++A TA II++G A+ RI +T +G ++ V+ WP RA L +R L+++L R + ++++ A+Q L A A Q I A EP+ W PF Y K + K +AR+ M +R + Sbjct: 501 FKPDARKLKAGS---KVACAVGVGGLLGIIAGRNYGYWAVVTIAFIIGGYQGTSFRAAWLRLQGTVAGAIYGYLVILVVHGHP-VAVGALLVPWVALVTFIRYSKAYGYSGVVAGFTAAIIMLGYKSSNQNVQDYALGRITETCIGIVTFIVVETCVWPNRAALLVREALISALQDARACFAAIVRSYMEEECMQCRQKAVQQVAATEKTLAALMAKQGPLIDEAASEPDFWRAPFPIPVYCKLLDLQKRMARLLYAMDCALRVT 761 The following BLAST results are available for this feature:
BLAST of EWM22996.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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