EWM23014.1, cds7661 (CDS) Nannochloropsis gaditana

Overview
NameEWM23014.1
Unique Namecds7661
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:48265..48270 +
Alignment locationCM002473.1:48626..48901 +
Alignment locationCM002473.1:49154..49193 +
Alignment locationCM002473.1:49237..49268 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23014.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100698g1.3515.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:48265..48270 +
CM002473.1supercontigCM002473.1:48626..48901 +
CM002473.1supercontigCM002473.1:49154..49193 +
CM002473.1supercontigCM002473.1:49237..49268 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23014.1 vs. NCBI_GenBank
Match: gi|585103800|gb|EWM23014.1| (hypothetical protein Naga_100698g1 [Nannochloropsis gaditana])

HSP 1 Score: 235.343 bits (599), Expect = 2.307e-78
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 
Query:    1 MDAAVLSSRFLESGRQRCPLFLRASPSLPITYTCVSSSSLPRRSVPRPTPFFYAATPRPRRLSWSDKSNGWVLTNTGKQPKKTQAGHRTCRNIVGSTSGAGSSLKAGWGGPIQRAPG 117
            MDAAVLSSRFLESGRQRCPLFLRASPSLPITYTCVSSSSLPRRSVPRPTPFFYAATPRPRRLSWSDKSNGWVLTNTGKQPKKTQAGHRTCRNIVGSTSGAGSSLKAGWGGPIQRAPG
Sbjct:    1 MDAAVLSSRFLESGRQRCPLFLRASPSLPITYTCVSSSSLPRRSVPRPTPFFYAATPRPRRLSWSDKSNGWVLTNTGKQPKKTQAGHRTCRNIVGSTSGAGSSLKAGWGGPIQRAPG 117
The following BLAST results are available for this feature:
BLAST of EWM23014.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103800|gb|EWM23014.1|2.307e-78100.00hypothetical protein Naga_100698g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7681rna7681Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications