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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100698g1.3515.mrna |
| Orig protein id | gnl|cribi|Naga_100698g1.3515 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:48265..49268 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7681 ID=rna7681|Name=rna7681|organism=Nannochloropsis gaditana|type=mRNA|length=1565bp
AAAATCCTTCTTGTGAGCGAAGGAACTGACAACGGTGAAAAAAATTGAGC
TGGACTGTCTGTCTTTTCTTCTTTGGGGTCCAGTTGACATGAAAAGCCAG
CCATTGCAATCTTATGAAAGGACTTTCACCGACAGCAAAGTCGTCCTTTA
CACGCTTGTATCCTACCGGCTTTCAATACAGTCGAGTTCCCTTTTAAAAT
CAGCGACATAGCGGGTATTCTTTTGAGAGGATGAATAAAAAAATGGGCCA
ATACGCGTGACAGCATGCATGAATGTAGCGCGTTTTGATGTTGTTGTTCT
CAACGAAGAGTATTTGGAATAATCCTGCTGGATTCGCGAAGAGTCACGTC
ATATGAAAGTGCGGCACTCTCAGCCCTCTTTCTTCGATGTTCTGTTCATC
CATTATAAGCCTTTATGTCGTACCTGGTATTCATATAACACATTCTTTAT
CATGGTCATGCAACATTTCACGGAGCACGAGCTAATTGGCTCTTCCTATC
TACCCCCCATGACAAATTTCTTCGCTGCACAGTGATTTGACCCGCAGATC
GAATTACTCGATGGCTTCTTTGTCTGCAGCATCCATGAACTTGTGTACGT
CGCCCACTCCTCTGACCAATTCCGCTGCGAATTCTTTTTCTGTTGATTCT
GTGCCTACCCAGAGGATGGATATCAAGAGAAGGTGGCCTCACCGTCCGCA
AGAAGTACCCTCCTCGGAGTTTATTCGACCAAAAACCACTTGGGAGAGGG
TGGAAGATGCGGAGGAGGGGGGGCGGGAGGGAACGCACGAGGCAGGGCAA
ATCGGCCCCCCCCACCATAGGAGGAATGTAGACTGGGTACGGGCATTTCG
GTCGTGCCTCCTTTCAATGACACACAAACAAGAAGAGCTCGAGACGAAGA
GGGAACGAAGCGAGGATGAAAAGGAGAGGAAGGAAGTGGAGGTCATGCAT
TGCCTAGCTGAAGGTATGGGGGTTTTGGGTGCTTGAATGGGGCACCAAGT
GGTGAAGGACGAGAGAAGAGGATGGTAGGAAACAAAAGCTGAAGATATTG
GGTCGGTAGAAGGGAGTGCTGAGTAAGGCCAAGCTATGAGTGGTTATAAC
TCATAGAATGAGAGTGTGAAGAAGGGTTAAACAGAAGAAGGGTTTAACAG
TCCACATATACGGGATGAACAAAACTACTATCAGATTTTCTCGAGGAGAG
GAACTCAAAAGGACAGGAGCAAGTGACAACGAGCAGAGGGAAACGTGCGC
TCATGTAGGGGGGGAGGCACGTCTAATGAGAAGAGGACAGATATGTTGAA
GAAGAAGCTGAGATGTTGCAGAAATCAATCTGTATGATTACTTATGTGTA
TATATATACATATATATACATACGTACCCCACTCAAAACATCGGAGAAGG
GGAGTGCAGGAAAAAGAAAGGTATGAGCCACCATCTTTTGCGCACTGAAG
AAACTGAGAAAGAAAATTAAAATGTCTGTCGAGGGTGGCAAGCGTGGCGC
TCCACAGCGCATAAAATATACGATCTTTGCAAAAAGATCAAGTCAAGAGA
TCGACCTTGAAGCAT back to topprotein sequence of rna7681 >rna7681-protein ID=rna7681-protein|Name=rna7681|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MDAAVLSSRFLESGRQRCPLFLRASPSLPITYTCVSSSSLPRRSVPRPTP
FFYAATPRPRRLSWSDKSNGWVLTNTGKQPKKTQAGHRTCRNIVGSTSGA
GSSLKAGWGGPIQRAPG back to topmRNA from alignment at CM002473.1:48265..49268+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7681 ID=rna7681|Name=rna7681|organism=Nannochloropsis gaditana|type=mRNA|length=1004bp|location=Sequence derived from alignment at CM002473.1:48265..49268+ (Nannochloropsis gaditana)
ATGGATGTGAGGTGCTTTTGATAAATGGTGCCGGCGGTCATGTGAAGCCC
GCCACTAAGGAGAAGCTGCAGAGCCGCCGGTCTGCGACTTTTTTCGTGCT
TCCCGAAACACAAGTATGCGCCCAAACAAAACACTTCACTGCGCCACATA
CAACAAAAATTGACACATTTAAAAAAGCAATGCGCGGCATGGTAGCATGT
AGTATGCCAGGACCGGCACAAGAAAGCTTCGCAGAGTGGACATGCTCTTG
CTCTTTATTCTGCGCTACATTCAAAGTTCCACGCACGACGCAACCCATCA
TCAAGCATTCTTACACCTCACGCTTACATGATTGTTACGATTCGCTTGTA
CCTTGACACAGGCAGCCGTACTCTCGTCGCGCTTCCTAGAAAGTGGACGT
CAAAGATGCCCTCTTTTTCTACGCGcgtctccgtcccttcccatcACCTA
TACCTGTGTGTCATCTTCGTCTTTGCCTCGGCGCTCCGTGCCACGGCCGA
CCCCTTTCTTCTACGCGGCgacgcctcgtccacgaagGCTGTCTTGGAGC
GACAAAAGCAATGGGTGGGTATTGACGAATACGGGAAAGCAGCCCAAAAA
GACGCAAGCTGGCCACAGGACGTGCCGCAATATCGTGGTGAGTACGGCCG
TAAGACGCATGTCTTATGAATGATTATCATGTCCAACCTAAGCCATGTGC
CAAAGAGGTACACGAAATTGTGCGTGGGAATGCCGGCTTTGGCCCTCTGA
GAAAGTAGAAAAGTCAGCGTCTCTCTAACTCATGtggcttcctctgcccc
ccatGATCTCTGACCCGCCCGTCGGATTCCCCCCCACTTCCCCCCACTTT
CCCCCACTGTTCCGCGCTCTTTTCGCACGTTGTCCACAGGGGTCAACCTC
GGGGGCTGGCTCGTCATTGAAAGCTGGATGTACCCCGATTGGTGGAAGTC
GACCGGAGTGCCCTtctggaagggggaggcccaATTCAACGCGCGCCTGG
GTAG back to topCoding sequence (CDS) from alignment at CM002473.1:48265..49268+ >rna7681 ID=rna7681|Name=rna7681|organism=Nannochloropsis gaditana|type=CDS|length=1416bp|location=Sequence derived from alignment at CM002473.1:48265..49268+ (Nannochloropsis gaditana)
ATGGATGCAGCCGTACTCTCGTCGCGCTTCCTAGAAAGTGGACGTCAAAG
ATGCCCTCTTTTTCTACGCGcgtctccgtcccttcccatcACCTATACCT
GTGTGTCATCTTCGTCTTTGCCTCGGCGCTCCGTGCCACGGCCGACCCCT
TTCTTCTACGCGGCgacgcctcgtccacgaagGCTGTCTTGGAGCGACAA
AAGCAATGGGTGGGTATTGACGAATACGGGAAAGCAGCCCAAAAAGACGC
AAGCTGGCCACAGGACGTGCCGCAATATCGTGGGGTCAACCTCGGGGGCT
GGCTCGTCATTGAAAGCTGGATggggaggcccaATTCAACGCGCGCCTGG
GTAGATGGATGCAGCCGTACTCTCGTCGCGCTTCCTAGAAAGTGGACGTC
AAAGATGCCCTCTTTTTCTACGCGcgtctccgtcccttcccatcACCTAT
ACCTGTGTGTCATCTTCGTCTTTGCCTCGGCGCTCCGTGCCACGGCCGAC
CCCTTTCTTCTACGCGGCgacgcctcgtccacgaagGCTGTCTTGGAGCG
ACAAAAGCAATGGGTGGGTATTGACGAATACGGGAAAGCAGCCCAAAAAG
ACGCAAGCTGGCCACAGGACGTGCCGCAATATCGTGGGGTCAACCTCGGG
GGCTGGCTCGTCATTGAAAGCTGGATggggaggcccaATTCAACGCGCGC
CTGGGTAGATGGATGCAGCCGTACTCTCGTCGCGCTTCCTAGAAAGTGGA
CGTCAAAGATGCCCTCTTTTTCTACGCGcgtctccgtcccttcccatcAC
CTATACCTGTGTGTCATCTTCGTCTTTGCCTCGGCGCTCCGTGCCACGGC
CGACCCCTTTCTTCTACGCGGCgacgcctcgtccacgaagGCTGTCTTGG
AGCGACAAAAGCAATGGGTGGGTATTGACGAATACGGGAAAGCAGCCCAA
AAAGACGCAAGCTGGCCACAGGACGTGCCGCAATATCGTGGGGTCAACCT
CGGGGGCTGGCTCGTCATTGAAAGCTGGATggggaggcccaATTCAACGC
GCGCCTGGGTAGATGGATGCAGCCGTACTCTCGTCGCGCTTCCTAGAAAG
TGGACGTCAAAGATGCCCTCTTTTTCTACGCGcgtctccgtcccttccca
tcACCTATACCTGTGTGTCATCTTCGTCTTTGCCTCGGCGCTCCGTGCCA
CGGCCGACCCCTTTCTTCTACGCGGCgacgcctcgtccacgaagGCTGTC
TTGGAGCGACAAAAGCAATGGGTGGGTATTGACGAATACGGGAAAGCAGC
CCAAAAAGACGCAAGCTGGCCACAGGACGTGCCGCAATATCGTGGGGTCA
ACCTCGGGGGCTGGCTCGTCATTGAAAGCTGGATggggaggcccaATTCA
ACGCGCGCCTGGGTAG back to top
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