EWM23020.1, cds7652 (CDS) Nannochloropsis gaditana

Overview
NameEWM23020.1
Unique Namecds7652
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:24582..24618 -
Alignment locationCM002473.1:24396..24463 -
Alignment locationCM002473.1:23886..24202 -
Alignment locationCM002473.1:23679..23771 -

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Properties
Property NameValue
Start range23679
Start range.
Protein idEWM23020.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101592g1.1339.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:24582..24618 -
CM002473.1supercontigCM002473.1:24396..24463 -
CM002473.1supercontigCM002473.1:23886..24202 -
CM002473.1supercontigCM002473.1:23679..23771 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23020.1 vs. NCBI_GenBank
Match: gi|585103813|gb|EWM23020.1| (hypothetical protein Naga_101592g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 327.405 bits (838), Expect = 4.333e-113
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 
Query:    1 MRPPPATLGLTRGGGVTAMILCILHRRGGILSFVQAFRPPVHLPARLSHAAAAAISPLLVSAASSPPSAPPSFFSLAAMRRRGDHGDGREGGQGRRGWVTQQAAASSSSSSSSSSSRSATCALTGAATVLAASATSAEMQGELEVREGARAKDHRPKVRLALPPSSPPXPPP 172
            MRPPPATLGLTRGGGVTAMILCILHRRGGILSFVQAFRPPVHLPARLSHAAAAAISPLLVSAASSPPSAPPSFFSLAAMRRRGDHGDGREGGQGRRGWVTQQAAASSSSSSSSSSSRSATCALTGAATVLAASATSAEMQGELEVREGARAKDHRPKVRLALPPSSPPXPPP
Sbjct:    1 MRPPPATLGLTRGGGVTAMILCILHRRGGILSFVQAFRPPVHLPARLSHAAAAAISPLLVSAASSPPSAPPSFFSLAAMRRRGDHGDGREGGQGRRGWVTQQAAASSSSSSSSSSSRSATCALTGAATVLAASATSAEMQGELEVREGARAKDHRPKVRLALPPSSPPXPPP 172
The following BLAST results are available for this feature:
BLAST of EWM23020.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103813|gb|EWM23020.1|4.333e-113100.00hypothetical protein Naga_101592g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7672rna7672Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications