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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100436g2.9343.mrna |
| Orig protein id | gnl|cribi|Naga_100436g2.9343 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002473.1 | supercontig | CM002473.1:8482..10134 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7670 ID=rna7670|Name=rna7670|organism=Nannochloropsis gaditana|type=mRNA|length=1071bp
TCATGCTTCTGGTACCTGTAGATCGAATCTTCCCTCTCATCGAGCATAAT
ATCCACTCCGCCATCTATCCGCAGGGATGGCCTCACCTTCCCGGCTCATG
AGTCCTACCAACACGGCCACCACCGTCACCGTCACGACCGGCAGCGCCGG
TGAAGGAAGCAGTGACAGCCTGGAATCAGATGAATCGTCCTCTGCTAATA
CCTCCTCCTCCCCCGCCCGCTCGACCGATGACCGATCCCGCGCTCCCCGC
ATCACTCGAAGCCGAAGCGGGCAGCTCAAGGAGGCATGCGAACATGCGGG
CACACCAGGGAAATCCTTCGACCTCCACGTCACCCTCCCCCCCGACCCTA
GCGAGAGAGGAAGCCCTCCTAGCGACCTCGGTACTCCAGCGAACCCGTCC
GCCCCTCGGCCAGGCTCTCTCCTCCGTCGACATTCAGATTACCCGCGGAA
GATCTCCCACACAAAGCCTTCCCTCGACCCGAAGCCCATCACCTCGCACT
CCGTCTCATTCAAGGAGGACCACCCGTCCAAGGACGAGATGCCCGCCCCC
GTAACCAAGTACTCGCGGTCTCTGACCATGGGAGCGGCCGACCTCCGCGG
GCTCAAAGCTCTCAAATCGCCTTCTTCCAGGTCTCGCGGCGGCTTCGAGC
CGGCCTCCCCCTTCCAAAAAGACCTGGAAGCGCGCTGGCTGGAGGCGATG
GCCAAACGCCGGCGGCGGGAGGAGGAAGCCTCCCCCGAACCGCGCCCCCC
CTGGCCGGCCCAGTTGGCGCGCTTCGCCTCTTTCTCCGCCATTGACACGC
CCCGGCCCCCGCCCGTCATGGCCTCGGACAGCATGTCCCTGCTCGTGGAC
GACGTGATGCCGCACGCCCTCTCCCGCCTCATGTCCGGTCGGATCACCCC
CAAGGAGTTTCAGGAGGCGAGGGCGCTCTGTCTGCCTGGCACCTGGGGAC
ATCGGGCGCTCCTGTGGGCGGCCTGTTTTGCGGCCTTCGGGGCTGCGTAC
GCCAAAACCATCATAGCCGCCGTCGCTCCCTCTCTGATCGAGGATTTCGG
CATCTCCAAGAGTGTGTACGG back to topprotein sequence of rna7670 >rna7670-protein ID=rna7670-protein|Name=rna7670|organism=Nannochloropsis gaditana|type=polypeptide|length=338bp
PSLLARLRRCLGRGLFSLTAAFRQCFSNLLTPPFFFLVVTTFTFYGAFQP
LETFAVSYLKAHQGFTSTHASLCASILPSLSVLLSPPYGCPGRQGAGPFL
LRPPSLLASDLPVAPRLHAPLVHAPDRPRTRLPPPRPLPGPKLDPGLLPR
LARLRLFLRLDLDGHPILRPRPVPRSRSRDDPRHRRRRHPGRPGGSGAAL
GPGAGGGGGAGIGGRSRADGDPGGLGVREERLAHVDWPGGGGGSGHAACH
VGLEEETFGGRFGVRLGGRGEGEKEGGQDERENVGRCPLWVWKVACGEGG
KCQEREDGWEDYGVFTLKSNPVTTAVGSRNGGALKCGA back to topmRNA from alignment at CM002473.1:8482..10134+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7670 ID=rna7670|Name=rna7670|organism=Nannochloropsis gaditana|type=mRNA|length=1653bp|location=Sequence derived from alignment at CM002473.1:8482..10134+ (Nannochloropsis gaditana)
ccctccctcctcgcccgcctgcgTCGCTGCCTGGGCCGtggcctcttctc
cctgACCGCCGCTTTCCGCCAGTGCTTCTCCAACCTCCTgaccccgccct
tcttcttcctcgtggTCACCACCTTCACCTTCTACGGCGCCTTCCAGCCC
CTTGAGACCTTCGCGGTCAGCTACTTGAAAGCCCACCAGGGCTTTACCTC
CACGcacgcctccctctgcgCCTCcattctcccctccctctccgtcctcc
tctcccccccctatGGGTGCCCTGGTCGACAAGGAGCtggcccctttctc
ctccgcccgccctcgctcctgGCGTCGGACCTACCTGTGGCCCCCCGGCT
CCACGCTCCTCTGGTCCATGCTCCTGACCGCCCTCGGActcgtctgcctc
ctccccgccccctcccaggccctaAGCTGGATCccgggcttcttcctcgt
ctcgcTCGGCTACGCCTTTTCCTGCGCCTCGATTTGGACGGCCATCCCAT
ACTTCGTCCCCGACCGGTCCCTCGGTCTCGCTCTCGGGATGATCCACGCC
ATCGACGACGCCGCCATCCTGGCCGTCCAGGTGGAAGTGGGGCGGCTCTT
GGaccaggcgcgggaggaggcggaggcgctggGATCGGCGGGAGAAGCAG
AGCTGATGGAGACCCTGGAGGACTTGGAGTACGAGAGGAGCGTCTTGCCC
ATGTTGATTGgcctggcggtggtggcggctcTGGCCACGCTGCCTGTCAT
GTCGGCCTTGAAGAAGAAACTTTCGGCGGGAGGTTTGGAGTTCGCctagg
agggcgaggggagggagaaaaggagggaggacaggacgaAAGAGAAAACG
TCGGGAGATGTCCGCTCTGGGTCTGGAAGGTGGCatgcggagaaggagga
aaatgtcaagagagagaagatggGTGGGAGGACTATGGCGTGTTTACTCT
CAAGTCGAATCCTGTGACGACAGCTGTTGGAAGCAGGAATGGAGGCGCAC
TTAAGTGTGGAGCCTAAGGTACATTCATACATAGTACGGTAGGGTGCGGG
ATGTCTTCAAAAGTCGAATGttagaggagggtgagatgTGGGTCGAAGGA
TCGGCTGGCACCACAGGAAAATGGAAATATGAATTAGGACGGcgtagggc
gggaggtgtAAGTACAAATGGGGCGATGCAGGAGGGAACAAGTGTAAGAA
GGGGAAGCTGAGGataggagaaaaaggggaataGGCGGGGAAGGCAAAGT
GAACTAGGTCCTGGACGGGAGCTGTAAGTACAAATGGGGCAAtgcgggag
gggacgagTGTGAAAACTGGAAGCTAAGGataggagaaaaaggggaataG
GCGGGGAAGTCAAAGTGAACTAGGTCCTGCACGGGAGGTGTAAGCAGATT
ACAAATGGGGCGAtgcgggaggggacgagTGTCAAAACGGGCAGCTGAgg
atgggagaagaagagaaaaaggcggggaaggaaaactcGATCAAACGGGA
CAGTGTCACACCTTCCACCGAATGAGGAGCTCGGATTTGTCAAGGATCAA
TACATTCTTCGCGCAAtcgtctttttttttcctgtttCTTCAATATGCTT
TTTCCCGTGGATGACCCAGTCGAAATTCCACAACATCCTGACCGCAacgg
atg back to topCoding sequence (CDS) from alignment at CM002473.1:8482..10134+ >rna7670 ID=rna7670|Name=rna7670|organism=Nannochloropsis gaditana|type=CDS|length=1017bp|location=Sequence derived from alignment at CM002473.1:8482..10134+ (Nannochloropsis gaditana)
ccctccctcctcgcccgcctgcgTCGCTGCCTGGGCCGtggcctcttctc
cctgACCGCCGCTTTCCGCCAGTGCTTCTCCAACCTCCTgaccccgccct
tcttcttcctcgtggTCACCACCTTCACCTTCTACGGCGCCTTCCAGCCC
CTTGAGACCTTCGCGGTCAGCTACTTGAAAGCCCACCAGGGCTTTACCTC
CACGcacgcctccctctgcgCCTCcattctcccctccctctccgtcctcc
tctcccccccctatGGGTGCCCTGGTCGACAAGGAGCtggcccctttctc
ctccgcccgccctcgctcctgGCGTCGGACCTACCTGTGGCCCCCCGGCT
CCACGCTCCTCTGGTCCATGCTCCTGACCGCCCTCGGActcgtctgcctc
ctccccgccccctcccaggccctaAGCTGGATCccgggcttcttcctcgt
ctcgcTCGGCTACGCCTTTTCCTGCGCCTCGATTTGGACGGCCATCCCAT
ACTTCGTCCCCGACCGGTCCCTCGGTCTCGCTCTCGGGATGATCCACGCC
ATCGACGACGCCGCCATCCTGGCCGTCCAGGTGGAAGTGGGGCGGCTCTT
GGaccaggcgcgggaggaggcggaggcgctggGATCGGCGGGAGAAGCAG
AGCTGATGGAGACCCTGGAGGACTTGGAGTACGAGAGGAGCGTCTTGCCC
ATGTTGATTGgcctggcggtggtggcggctcTGGCCACGCTGCCTGTCAT
GTCGGCCTTGAAGAAGAAACTTTCGGCGGGAGGTTTGGAGTTCGCctagg
agggcgaggggagggagaaaaggagggaggacaggacgaAAGAGAAAACG
TCGGGAGATGTCCGCTCTGGGTCTGGAAGGTGGCatgcggagaaggagga
aaatgtcaagagagagaagatggGTGGGAGGACTATGGCGTGTTTACTCT
CAAGTCGAATCCTGTGACGACAGCTGTTGGAAGCAGGAATGGAGGCGCAC
TTAAGTGTGGAGCCTAA back to top
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