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Properties
Property Name | Value |
Product | phospholipase - like protein |
Orig transcript id | gnl|cribi|Naga_100245g3.7081.mrna |
Orig protein id | gnl|cribi|Naga_100245g3.7081 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002472.1 | supercontig | CM002472.1:460383..462575 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7643 ID=rna7643|Name=rna7643|organism=Nannochloropsis gaditana|type=mRNA|length=843bp ATGCACGGCCGAAGCAAGAAGCTCGGCAACATTTTAGAGGAGCTGGGCGT CAAGAAAGGAGACAGGGTGGCAACACTGGCCATGAATACGTACAGACATA TGGAACTTTACTTTGCCGTTTCGGGTGCTGGGGCCGTACTACACACCTTG AATCCTCGTTTGTTTGCAGAGACTCTCACATGGATCGTCCGCCACGCCCA AGACAGCGTCCTCTTCTTCGACCCCTGCTTCGCCTCCCTTGTGGAGCGAC TCCTCCCGCACTGTCCAAGTGTTAAGCACTGGATCTGCCTCGTGGACGAA GAGCGGATGCCAGTCCTACCTTCCCTTTCTCCGTCCTCTCCTTTCCTTTC CCTTCACAACTACGAGGCTTTGCTTCGGGAGGGAAAAGAGGACTATGTGT GGCCCATATTGGAGGAGACAGCAGCCTCTAGTCTCTGCTATACAAGCGGC ACGACGGGCCCACCCAAGGGAGTGCTATACTCTCATCGCTCCACCGTGCT TCACTCCTTGGCCGCCGCCCTCCCTGACTCCCTCAACGTCTCTGCCCGCG ACACTGTTTTGCCCGCCGTTCCTCTTTTTCACGTGAACGCCTGGGGCATC CCCTACACTGCAGCCATGGTAGGGTGCAAGCTGGTCTTGCCCGGTTCCGC TTTGGATGGGGCTTCCCTGTACGAGCTGATGAAGGAAGAGGGGGTGCCAC CGGAGGAGGGAGAAAGGGACGGAGGGGTGAGAGCAGGCCACCAAGAGAGT TTCTACACGGACGACGATGGCGAGCGCTGGTTCCTGACGGGGGACGTGGC TACCATCTGTCCGGATGGCTACATTAAGATCACGGATAGGTGA back to topprotein sequence of rna7643 >rna7643-protein ID=rna7643-protein|Name=rna7643|organism=Nannochloropsis gaditana|type=polypeptide|length=590bp MLCRNFHALKHTNSSPYLTHFSSSSFAWTLLAMPGGPNMFPSEESGLNVD QQDWIDEALQAFHQDVEDFWVPKAVCRLTQPISALTFLRDFVQPSIPVVF CQGSGLMGEDWGLEAWKDWKEIVEKIGGERLVSVNVTPDGRGDAILGLRE GQSGRGSGRGEVDDQDGSRNASGDAQASSDKSDSLSSPRNYPTSRPRRVF VKPEERRMTFASFVKTLLQASGGEEQEKEVMYLSQQDDNLRREFPELLGK EQLPDRGGGGQVSYLFSPCFLSPPLFLRFLLTFLLNERLIRLDFFQILFP LFSFFVLLGTCQRLSPRPASFRLSSRCHQPLDWGCSLHFVPPQGPLRKYV CRAKGRKGRKDSSAHRNLLWSILRSLTAKAAIVIKKCQPACGQSHILIRS LPQPVLTPSPLQHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLD GREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLE VRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRL GAQRQERMKERGRDGRAERGQEIDRRDLNACRSYGSTSQT back to topmRNA from alignment at CM002472.1:460383..462575+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7643 ID=rna7643|Name=rna7643|organism=Nannochloropsis gaditana|type=mRNA|length=2193bp|location=Sequence derived from alignment at CM002472.1:460383..462575+ (Nannochloropsis gaditana) GATACAAGGAGCAAGTAGAGTTGAATGAGCTATCACACGTAgcgtttccc
tcccaccctcagAGACGGGTGACTCGATTGCAGGGATACGATGCTGACAG
ACCGAGAAACGTATGCTTTGTCGAAACTTTCATGCCCTGAAACACACAAA
CTCATCTCCCTACCTCACTCACTTTTCTAGCTCGTCGTTTGCATGGACCC
TATTGGCAATGCCAGGAGGTCCAAATATGTTTCCGTCCGAGGAAAGTGGT
CTCAATGTTGACCAACAAGATTGGATTGACGAAGCGTTACAAGCTTTTCA
TCAAGATGTCGAGGATTTCTGGGTCCCAAAGGCAGTGTGTCGATTGACAC
AGCCAATAAGTGCCTTGACTTTCCTTAGGGTAAGCATTGTGCCAATGGAG
AAAATAAGGATGGGAAATAATAATGATGCGGAGAGAATGAATAGTGATAA
GCATCACAACAAAAAAAGTAACTGCACGAAAAAGGGCAAGTCGAAGACCC
TCGTTCATCGTATCACTCATCTTTCTAATCTTGTCAGGACTTTGTccagc
cctccatcccgGTCGTGTTTTGTCAAGGAAGCGGCCTAATGGGAGAAGAT
TGGGGGCTGGAGGCTTGGAAAGATTGGAAAGAAATTGTTGAAAAGATCGG
AGGAGAGCGATTGGTCTCCGTGAACGTGACGCctgatgggaggggggacg
caATCTTGGGTTTAAGGGAAGGGCAgtctgggagaggaagcgggagagga
gaagtAGACGATCAGGACGGATCGAGAAATGCATCGGGGGATGCACAAGC
GAGCTCCGACAAATCTGACTCCTTGTCATCGCCGAGAAATTATCCTACTT
CGCGCCCACGACGGGTCTTTGTGAAGCCAGAAGAAAGGCGGATGACGTTT
GCGTCCTTTGTCAAGACACTGCTGCAGGccagcgggggagaggaacaaGA
AAAGGAGGTCATGTATTTGAGTCAACAGGATGACAATCTGCGTCGGGAAT
TTCCGGAGTTGCTTGGGAAAGAGCAGCTGCcggacagaggaggagggggg
caggtaTCCtaccttttttctccttgctttctctccccccccctctttct
tcgatTTCTTCTCACATTTTTATTGAACGAACGTCTCATTCGTCTAGATT
TCTTTCAAATATTgttcccccttttttcctttttcgttCTTTTAGGTACC
TGCCAAcggctttcccctcgcccagcaAGCTTTCGGCTCTCCTCCCGATG
CCATCAACCTCTGGATTGGGGATGCTCGCTCCATTTCGTCCCTCCACAAG
GACCCTTACGAAAATATGTATGCCGTGctaaagggagaaaaggtaGGAAG
GATTCCTCTGCCCATCGCAACCTCCTCTGGAGCATTCTCCGTTCTTTGAC
TGCAAAGGCCGCTATCGTCATTAAAAAATGCCAGCCAGCGTGTGGTCAGT
CACACATTCTGATTCGTTCATTACCGCAACCCGttctcaccccctcccca
cttCAGCATTTTactctcttcccgccctcggacgtgtcctccttcctctt
cgctcgCGGTCTTCCGCAAGCCTCCTATGCCTTCGATTCGATCCGCTCCT
GTTTTCAAGTCAACCTCGATGGCAGAGAGAAGGGCTGTACGAACGATGGG
ACGGTTGATTGGGTCGATTTGGAAGCTTCgaaggcagcggcagcaaggcg
gggaggaagggagggagggagggaggaagggagggaggagaggcgggagc
gTGTCCTGCATCCGCTAGAAGTGCgagtgaaggaaggagaagtctTGTAT
CTACCCGCTTTGTGGTACCACGAAGTAACTCAGACGTGTCCCACCGTTGC
CGGTAAGAATGAGGTTGGGGAGGGCATGAATACCAGAACACTTATTGTCT
CAAAACATcgccattcctccctttctttcctccccccctccctccctcgt
tctctTCCCTATCTCCGGCTGGCTTTGCTCAGTAAACTTCTGGCACGACA
TGTGTTTCTTTGGCCCCAAGTATGTGTACTTCAACTTCTTGCAACGGCTA
GGTGCGCAGCGACAAGAGCGgatgaaagagagggggagggacgggcgagC
AGAAAGGGGCCAGGAAATCGACAGGCGCGATCTCAACGCTTGTAGAAGTT
ACGGAAGTACGAGTCAAACGTGAAAAGAAAACATTCTGGGAAG back to topCoding sequence (CDS) from alignment at CM002472.1:460383..462575+ >rna7643 ID=rna7643|Name=rna7643|organism=Nannochloropsis gaditana|type=CDS|length=5319bp|location=Sequence derived from alignment at CM002472.1:460383..462575+ (Nannochloropsis gaditana) ATGCTTTGTCGAAACTTTCATGCCCTGAAACACACAAACTCATCTCCCTA CCTCACTCACTTTTCTAGCTCGTCGTTTGCATGGACCCTATTGGCAATGC CAGGAGGTCCAAATATGTTTCCGTCCGAGGAAAGTGGTCTCAATGTTGAC CAACAAGATTGGATTGACGAAGCGTTACAAGCTTTTCATCAAGATGTCGA GGATTTCTGGGTCCCAAAGGCAGTGTGTCGATTGACACAGCCAATAAGTG CCTTGACTTTCCTTAGGGACTTTGTccagccctccatcccgGTCGTGTTT TGTCAAGGAAGCGGCCTAATGGGAGAAGATTGGGGGCTGGAGGCTTGGAA AGATTGGAAAGAAATTGTTGAAAAGATCGGAGGAGAGCGATTGGTCTCCG TGAACGTGACGCctgatgggaggggggacgcaATCTTGGGTTTAAGGGAA GGGCAgtctgggagaggaagcgggagaggagaagtAGACGATCAGGACGG ATCGAGAAATGCATCGGGGGATGCACAAGCGAGCTCCGACAAATCTGACT CCTTGTCATCGCCGAGAAATTATCCTACTTCGCGCCCACGACGGGTCTTT GTGAAGCCAGAAGAAAGGCGGATGACGTTTGCGTCCTTTGTCAAGACACT GCTGCAGGccagcgggggagaggaacaaGAAAAGGAGGTCATGTATTTGA GTCAACAGGATGACAATCTGCGTCGGGAATTTCCGGAGTTGCTTGGGAAA GAGCAGCTGCcggacagaggaggaggggggcaggtaTCCtaccttttttc tccttgctttctctccccccccctctttcttcgatTTCTTCTCACATTTT TATTGAACGAACGTCTCATTCGTCTAGATTTCTTTCAAATATTgttcccc cttttttcctttttcgttCTTTTAGGTACCTGCCAAcggctttcccctcg cccagcaAGCTTTCGGCTCTCCTCCCGATGCCATCAACCTCTGGATTGGG GATGCTCGCTCCATTTCGTCCCTCCACAAGGACCCTTACGAAAATATGTA TGCCGTGctaaagggagaaaaggtaGGAAGGATTCCTCTGCCCATCGCAA CCTCCTCTGGAGCATTCTCCGTTCTTTGACTGCAAAGGCCGCTATCGTCA TTAAAAAATGCCAGCCAGCGTGTGGTCAGTCACACATTCTGATTCGTTCA TTACCGCAACCCGttctcaccccctccccacttCAGCATTTTactctctt cccgccctcggacgtgtcctccttcctcttcgctcgCGGTCTTCCGCAAG CCTCCTATGCCTTCGATTCGATCCGCTCCTGTTTTCAAGTCAACCTCGAT GGCAGAGAGAAGGGCTGTACGAACGATGGGACGGTTGATTGGGTCGATTT GGAAGCTTCgaaggcagcggcagcaaggcggggaggaagggagggaggga gggaggaagggagggaggagaggcgggagcgTGTCCTGCATCCGCTAGAA GTGCgagtgaaggaaggagaagtctTGTATCTACCCGCTTTGTGGTACCA CGAAGTAACTCAGACGTGTCCCACCGTTGCCGTAAACTTCTGGCACGACA TGTGTTTCTTTGGCCCCAAGTATGTGTACTTCAACTTCTTGCAACGGCTA GGTGCGCAGCGACAAGAGCGgatgaaagagagggggagggacgggcgagC AGAAAGGGGCCAGGAAATCGACAGGCGCGATCTCAACGCTTGTAGAAGTT ACGGAAGTACGAGTCAAACGTGAATGCTTTGTCGAAACTTTCATGCCCTG AAACACACAAACTCATCTCCCTACCTCACTCACTTTTCTAGCTCGTCGTT TGCATGGACCCTATTGGCAATGCCAGGAGGTCCAAATATGTTTCCGTCCG AGGAAAGTGGTCTCAATGTTGACCAACAAGATTGGATTGACGAAGCGTTA CAAGCTTTTCATCAAGATGTCGAGGATTTCTGGGTCCCAAAGGCAGTGTG TCGATTGACACAGCCAATAAGTGCCTTGACTTTCCTTAGGGACTTTGTcc agccctccatcccgGTCGTGTTTTGTCAAGGAAGCGGCCTAATGGGAGAA GATTGGGGGCTGGAGGCTTGGAAAGATTGGAAAGAAATTGTTGAAAAGAT CGGAGGAGAGCGATTGGTCTCCGTGAACGTGACGCctgatgggagggggg acgcaATCTTGGGTTTAAGGGAAGGGCAgtctgggagaggaagcgggaga ggagaagtAGACGATCAGGACGGATCGAGAAATGCATCGGGGGATGCACA AGCGAGCTCCGACAAATCTGACTCCTTGTCATCGCCGAGAAATTATCCTA CTTCGCGCCCACGACGGGTCTTTGTGAAGCCAGAAGAAAGGCGGATGACG TTTGCGTCCTTTGTCAAGACACTGCTGCAGGccagcgggggagaggaaca aGAAAAGGAGGTCATGTATTTGAGTCAACAGGATGACAATCTGCGTCGGG AATTTCCGGAGTTGCTTGGGAAAGAGCAGCTGCcggacagaggaggaggg gggcaggtaTCCtaccttttttctccttgctttctctccccccccctctt tcttcgatTTCTTCTCACATTTTTATTGAACGAACGTCTCATTCGTCTAG ATTTCTTTCAAATATTgttcccccttttttcctttttcgttCTTTTAGGT ACCTGCCAAcggctttcccctcgcccagcaAGCTTTCGGCTCTCCTCCCG ATGCCATCAACCTCTGGATTGGGGATGCTCGCTCCATTTCGTCCCTCCAC AAGGACCCTTACGAAAATATGTATGCCGTGctaaagggagaaaaggtaGG AAGGATTCCTCTGCCCATCGCAACCTCCTCTGGAGCATTCTCCGTTCTTT GACTGCAAAGGCCGCTATCGTCATTAAAAAATGCCAGCCAGCGTGTGGTC AGTCACACATTCTGATTCGTTCATTACCGCAACCCGttctcaccccctcc ccacttCAGCATTTTactctcttcccgccctcggacgtgtcctccttcct cttcgctcgCGGTCTTCCGCAAGCCTCCTATGCCTTCGATTCGATCCGCT CCTGTTTTCAAGTCAACCTCGATGGCAGAGAGAAGGGCTGTACGAACGAT GGGACGGTTGATTGGGTCGATTTGGAAGCTTCgaaggcagcggcagcaag gcggggaggaagggagggagggagggaggaagggagggaggagaggcggg agcgTGTCCTGCATCCGCTAGAAGTGCgagtgaaggaaggagaagtctTG TATCTACCCGCTTTGTGGTACCACGAAGTAACTCAGACGTGTCCCACCGT TGCCGTAAACTTCTGGCACGACATGTGTTTCTTTGGCCCCAAGTATGTGT ACTTCAACTTCTTGCAACGGCTAGGTGCGCAGCGACAAGAGCGgatgaaa gagagggggagggacgggcgagCAGAAAGGGGCCAGGAAATCGACAGGCG CGATCTCAACGCTTGTAGAAGTTACGGAAGTACGAGTCAAACGTGAATGC TTTGTCGAAACTTTCATGCCCTGAAACACACAAACTCATCTCCCTACCTC ACTCACTTTTCTAGCTCGTCGTTTGCATGGACCCTATTGGCAATGCCAGG AGGTCCAAATATGTTTCCGTCCGAGGAAAGTGGTCTCAATGTTGACCAAC AAGATTGGATTGACGAAGCGTTACAAGCTTTTCATCAAGATGTCGAGGAT TTCTGGGTCCCAAAGGCAGTGTGTCGATTGACACAGCCAATAAGTGCCTT GACTTTCCTTAGGGACTTTGTccagccctccatcccgGTCGTGTTTTGTC AAGGAAGCGGCCTAATGGGAGAAGATTGGGGGCTGGAGGCTTGGAAAGAT TGGAAAGAAATTGTTGAAAAGATCGGAGGAGAGCGATTGGTCTCCGTGAA CGTGACGCctgatgggaggggggacgcaATCTTGGGTTTAAGGGAAGGGC AgtctgggagaggaagcgggagaggagaagtAGACGATCAGGACGGATCG AGAAATGCATCGGGGGATGCACAAGCGAGCTCCGACAAATCTGACTCCTT GTCATCGCCGAGAAATTATCCTACTTCGCGCCCACGACGGGTCTTTGTGA AGCCAGAAGAAAGGCGGATGACGTTTGCGTCCTTTGTCAAGACACTGCTG CAGGccagcgggggagaggaacaaGAAAAGGAGGTCATGTATTTGAGTCA ACAGGATGACAATCTGCGTCGGGAATTTCCGGAGTTGCTTGGGAAAGAGC AGCTGCcggacagaggaggaggggggcaggtaTCCtaccttttttctcct tgctttctctccccccccctctttcttcgatTTCTTCTCACATTTTTATT GAACGAACGTCTCATTCGTCTAGATTTCTTTCAAATATTgttcccccttt tttcctttttcgttCTTTTAGGTACCTGCCAAcggctttcccctcgccca gcaAGCTTTCGGCTCTCCTCCCGATGCCATCAACCTCTGGATTGGGGATG CTCGCTCCATTTCGTCCCTCCACAAGGACCCTTACGAAAATATGTATGCC GTGctaaagggagaaaaggtaGGAAGGATTCCTCTGCCCATCGCAACCTC CTCTGGAGCATTCTCCGTTCTTTGACTGCAAAGGCCGCTATCGTCATTAA AAAATGCCAGCCAGCGTGTGGTCAGTCACACATTCTGATTCGTTCATTAC CGCAACCCGttctcaccccctccccacttCAGCATTTTactctcttcccg ccctcggacgtgtcctccttcctcttcgctcgCGGTCTTCCGCAAGCCTC CTATGCCTTCGATTCGATCCGCTCCTGTTTTCAAGTCAACCTCGATGGCA GAGAGAAGGGCTGTACGAACGATGGGACGGTTGATTGGGTCGATTTGGAA GCTTCgaaggcagcggcagcaaggcggggaggaagggagggagggaggga ggaagggagggaggagaggcgggagcgTGTCCTGCATCCGCTAGAAGTGC gagtgaaggaaggagaagtctTGTATCTACCCGCTTTGTGGTACCACGAA GTAACTCAGACGTGTCCCACCGTTGCCGTAAACTTCTGGCACGACATGTG TTTCTTTGGCCCCAAGTATGTGTACTTCAACTTCTTGCAACGGCTAGGTG CGCAGCGACAAGAGCGgatgaaagagagggggagggacgggcgagCAGAA AGGGGCCAGGAAATCGACAGGCGCGATCTCAACGCTTGTAGAAGTTACGG AAGTACGAGTCAAACGTGA back to top
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