EWM23052.1, cds7623 (CDS) Nannochloropsis gaditana

Overview
NameEWM23052.1
Unique Namecds7623
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:460495..460761 +
Alignment locationCM002472.1:460920..462234 +
Alignment locationCM002472.1:462365..462555 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23052.1
Productphospholipase - like protein
Orig transcript idgnl|cribi|Naga_100245g3.7081.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:460495..460761 +
CM002472.1supercontigCM002472.1:460920..462234 +
CM002472.1supercontigCM002472.1:462365..462555 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
Homology
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|585103862|gb|EWM23052.1| (phospholipase - like protein [Nannochloropsis gaditana])

HSP 1 Score: 1212.59 bits (3136), Expect = 0.000e+0
Identity = 590/590 (100.00%), Postives = 590/590 (100.00%), Query Frame = 0
Query:    1 MLCRNFHALKHTNSSPYLTHFSSSSFAWTLLAMPGGPNMFPSEESGLNVDQQDWIDEALQAFHQDVEDFWVPKAVCRLTQPISALTFLRDFVQPSIPVVFCQGSGLMGEDWGLEAWKDWKEIVEKIGGERLVSVNVTPDGRGDAILGLREGQSGRGSGRGEVDDQDGSRNASGDAQASSDKSDSLSSPRNYPTSRPRRVFVKPEERRMTFASFVKTLLQASGGEEQEKEVMYLSQQDDNLRREFPELLGKEQLPDRGGGGQVSYLFSPCFLSPPLFLRFLLTFLLNERLIRLDFFQILFPLFSFFVLLGTCQRLSPRPASFRLSSRCHQPLDWGCSLHFVPPQGPLRKYVCRAKGRKGRKDSSAHRNLLWSILRSLTAKAAIVIKKCQPACGQSHILIRSLPQPVLTPSPLQHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRLGAQRQERMKERGRDGRAERGQEIDRRDLNACRSYGSTSQT 590
            MLCRNFHALKHTNSSPYLTHFSSSSFAWTLLAMPGGPNMFPSEESGLNVDQQDWIDEALQAFHQDVEDFWVPKAVCRLTQPISALTFLRDFVQPSIPVVFCQGSGLMGEDWGLEAWKDWKEIVEKIGGERLVSVNVTPDGRGDAILGLREGQSGRGSGRGEVDDQDGSRNASGDAQASSDKSDSLSSPRNYPTSRPRRVFVKPEERRMTFASFVKTLLQASGGEEQEKEVMYLSQQDDNLRREFPELLGKEQLPDRGGGGQVSYLFSPCFLSPPLFLRFLLTFLLNERLIRLDFFQILFPLFSFFVLLGTCQRLSPRPASFRLSSRCHQPLDWGCSLHFVPPQGPLRKYVCRAKGRKGRKDSSAHRNLLWSILRSLTAKAAIVIKKCQPACGQSHILIRSLPQPVLTPSPLQHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRLGAQRQERMKERGRDGRAERGQEIDRRDLNACRSYGSTSQT
Sbjct:    1 MLCRNFHALKHTNSSPYLTHFSSSSFAWTLLAMPGGPNMFPSEESGLNVDQQDWIDEALQAFHQDVEDFWVPKAVCRLTQPISALTFLRDFVQPSIPVVFCQGSGLMGEDWGLEAWKDWKEIVEKIGGERLVSVNVTPDGRGDAILGLREGQSGRGSGRGEVDDQDGSRNASGDAQASSDKSDSLSSPRNYPTSRPRRVFVKPEERRMTFASFVKTLLQASGGEEQEKEVMYLSQQDDNLRREFPELLGKEQLPDRGGGGQVSYLFSPCFLSPPLFLRFLLTFLLNERLIRLDFFQILFPLFSFFVLLGTCQRLSPRPASFRLSSRCHQPLDWGCSLHFVPPQGPLRKYVCRAKGRKGRKDSSAHRNLLWSILRSLTAKAAIVIKKCQPACGQSHILIRSLPQPVLTPSPLQHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRLGAQRQERMKERGRDGRAERGQEIDRRDLNACRSYGSTSQT 590          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|301097730|ref|XP_002897959.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106404|gb|EEY64456.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 89.7373 bits (221), Expect = 1.123e-15
Identity = 55/157 (35.03%), Postives = 76/157 (48.41%), Query Frame = 0
Query:  412 QHFTLFPPSDVSSFLFARGLPQASYAF----DSIRSCFQVNLDGREKGCTNDGTVD-WVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRLGAQRQERMKERGR 563
            +HFTL PPS V   L+ R  P A Y      +      Q +L+  E+   N    + W  L +           +    +  +      L+P+EV +  GEVLYLP+LWYH     CPT++VN+WHDM  F  +YVYFNF+  +GA       ER R
Sbjct:  204 KHFTLLPPSAVGC-LYEREFPSARYRHKDSPEPKEENLQEDLEATERFHENYPQYEKWTILSSPDKGETPWIPVDPLNIDKEKYPLAATLNPIEVVLNAGEVLYLPSLWYHRAAHLCPTISVNYWHDME-FDCRYVYFNFVHDIGATITALETERKR 358          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|1173944763|gb|OQR93462.1| (hypothetical protein THRCLA_08443, partial [Thraustotheca clavata])

HSP 1 Score: 89.7373 bits (221), Expect = 2.123e-15
Identity = 59/195 (30.26%), Postives = 90/195 (46.15%), Query Frame = 0
Query:   55 IDEALQAFHQDVEDFWVPKAVCRLTQPISALTFLRDFVQPSIPVVFCQGSGLMGEDW-GLEAWKDWKEIVEKIGGERLVSVNVTPDGRGDAILGLREGQSGRGSGRGEVDDQDGSRNASGDAQASSDKSDSLSSPRNYPTSRPRRVFVKPEERRMTFASFVKTLLQASGGEEQEKEVMYLSQQDDNLRREFPELL 248
            +DE L     D +DFW+PK + R+  P +A+ F RD+V  +IPV+           W  L+ W D  E  ++  G  +V+V+VTP G GDA+L L   ++                                            +VFV+PEER MTF+ F++        ++Q   V YLS Q+D+LR +FP+L+
Sbjct:    1 MDELLNQLSDDAKDFWMPKKISRIPPP-TAVEFYRDYVSKNIPVIITNAIN----HWPALQKWTD--EYFDEAIGNEIVTVDVTPTGYGDAVLTLENKKT--------------------------------------------QVFVQPEERNMTFSKFLEIY-----HDKQFDGVPYLSHQNDSLREQFPQLV 139          

HSP 2 Score: 88.5817 bits (218), Expect = 4.689e-15
Identity = 56/151 (37.09%), Postives = 72/151 (47.68%), Query Frame = 0
Query:  411 LQHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQ-------------VNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQ 548
            L+HF L PPSDV+ FL     P   Y   S    F              +++    +  T    VD V ++  K   A+                   + PLEV ++EGE+LYLP+LWYH  TQ C TV+VN+WHDM  F  KYVYFNFL 
Sbjct:  188 LKHFILLPPSDVA-FLHETEYPTTRYVHKSNVDQFDPSTLIQSKNPNWFIHMPPEGRETTPWIPVDPVAIDTDKFPKAKH------------------IQPLEVVLEEGEMLYLPSLWYHRATQLCDTVSVNYWHDME-FDAKYVYFNFLH 318          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|1173953595|gb|OQS01127.1| (hypothetical protein ACHHYP_01804 [Achlya hypogyna])

HSP 1 Score: 89.7373 bits (221), Expect = 2.365e-15
Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = 0
Query:  412 QHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRLG-AQRQERMK 559
            +HFTL PPSDV+ FL     P   Y  +S  + F        +  T+      V +EA+++        +    +  +    + + PLEV ++ GE+LYLP+LWYH  TQ C TVAVN+WHDM F   KYVYFNF+  +  A ++ R+K
Sbjct:  188 KHFTLLPPSDVA-FLHETTYPTTRYVHESRTARFDA---AALRPSTHPSWFVHVPVEAAESTP--WIPVDPLNVDAAQFPNAKHIAPLEVVLEAGEMLYLPSLWYHRATQLCDTVAVNYWHDMEFDA-KYVYFNFVHGVATAAKELRLK 329          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|1210520324|dbj|GAX20755.1| (hypothetical protein FisN_7Hh066 [Fistulifera solaris])

HSP 1 Score: 88.5817 bits (218), Expect = 3.219e-15
Identity = 51/139 (36.69%), Postives = 81/139 (58.27%), Query Frame = 0
Query:  414 FTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRLGA 552
            FTL PP+D + FL+ +      + +D+ R  + V L   E+   ++ +V   D + ++  AA    +   +         +  HP+EV+VKEGE+LYLPALW+H VTQ+C TV VN+W+DM F  P + +F+ LQ+L +
Sbjct:  275 FTLCPPAD-APFLYEQECESGQFLWDADRQEWMVQL---EEDANDNYSVG--DPQRTRWIAADITMKHNDKY-LEAFPLLKYTHPVEVKVKEGELLYLPALWFHRVTQSCETVGVNYWYDMKFESPIWTFFHLLQQLKS 406          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|1210529602|dbj|GAX11696.1| (hypothetical protein FisN_7Lh066 [Fistulifera solaris])

HSP 1 Score: 87.4261 bits (215), Expect = 9.109e-15
Identity = 52/137 (37.96%), Postives = 79/137 (57.66%), Query Frame = 0
Query:  414 FTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRL 550
            FTL PP+D + FL+ +      + +D+ R  + V+L   E    ++ +VD  +   ++  AA    +    E  +     R  HP+EV+VKEGE+LYLPALW+H VTQT  TV VN+W+DM F  P + +F+ LQ+ 
Sbjct:  278 FTLCPPAD-APFLYEQKCESGRFHWDADRREWMVHL---EDDADDNPSVD--EPVQTRWIAADVTMKHNV-EYSQAFSLLRYTHPVEVKVKEGELLYLPALWFHRVTQTRETVGVNYWYDMKFESPNWTFFHLLQQF 407          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|219118680|ref|XP_002180108.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408365|gb|EEC48299.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 85.5001 bits (210), Expect = 3.413e-14
Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 0
Query:  414 FTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRL 550
            FTL PP+D + FL+ +      + + +    + ++ D  + G T    + W+  +  +   +         E   E       HPLEV ++ G++LYLPALW+H VTQ+C TV +N+W+DM F  P + YF+FLQ L
Sbjct:  254 FTLCPPAD-APFLYEQNCSSGCFQYSATEG-WTISSDVHQDGTT--LKIPWISADVVEKEKS---------EVLDEFPLLTYTHPLEVHIRAGDLLYLPALWFHRVTQSCETVGINYWYDMKFDSPSWCYFHFLQSL 377          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|695420304|ref|XP_009527887.1| (hypothetical protein PHYSODRAFT_500996 [Phytophthora sojae] >gi|348679012|gb|EGZ18829.1| hypothetical protein PHYSODRAFT_500996 [Phytophthora sojae])

HSP 1 Score: 84.7297 bits (208), Expect = 4.832e-14
Identity = 54/172 (31.40%), Postives = 73/172 (42.44%), Query Frame = 0
Query:  412 QHFTLFPPSDVSSFLFARGLPQASY-------------------AFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLEVRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRLGAQRQERMKERGRD 564
            +HFTL PPS V   L+ R  P   Y                   A +     F  ++        + G   W+ ++       R                   L P+EV V  GEVLYLP+LWYH     CPT++VN+WHDM  F  +YVYFNF+  +GA  +    E GR+
Sbjct:  206 KHFTLLPPSAVGC-LYEREFPSTRYRHSASPKPEDEDHLVKDLVATERFHDKFPQHVAWEILSSPDKGDTPWIPVDPLNIDTKRYPLAAA-------------LSPIEVVVNAGEVLYLPSLWYHRAAHLCPTISVNYWHDME-FDCRYVYFNFVHDVGAVVRTLEDEHGRE 362          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|1191654244|gb|OTG06216.1| (putative 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Helianthus annuus])

HSP 1 Score: 84.3445 bits (207), Expect = 4.863e-14
Identity = 56/175 (32.00%), Postives = 83/175 (47.43%), Query Frame = 0
Query:  412 QHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLH-----PLEVRVKEGEVLYLPALWYHEVTQTCP----TVAVNFWHDMCFFGPKYVYFNFLQRLGAQRQERMKERGRDGRAERGQEIDRRD 577
            +HF L PP+DV   ++ R  P A Y ++     F++ L+   +       V W  +    +            E   +E  E  L+     P EV VK GE+LYLP++W+H V QT      T+AVN+W+DM  F  KY YFNFLQ L A ++        +  A  G++  R +
Sbjct:  195 KHFVLLPPTDVHR-MYVREYPAAHYNYNEETGEFKLQLENPPRH------VPWCSVNPYPSP-----------ENQDKEMSEFPLYFNGPKPFEVTVKAGEILYLPSMWFHHVRQTPDSRGLTIAVNYWYDMQ-FDIKYAYFNFLQSLPAPQEPTSHNLLTNENASDGEDKQREE 350          
BLAST of EWM23052.1 vs. NCBI_GenBank
Match: gi|508785711|gb|EOY32967.1| (2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 84.3445 bits (207), Expect = 6.286e-14
Identity = 56/155 (36.13%), Postives = 78/155 (50.32%), Query Frame = 0
Query:  412 QHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLDGREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLH-----PLEVRVKEGEVLYLPALWYHEVTQT-----CPTVAVNFWHDMCFFGPKYVYFNFLQRLGAQRQE 556
            +HF L PP+DV   ++ R  P A Y +      F++ L+  E+       V W  ++   A              G EER +  L+     P EV VK GE+LYLP++W+H V Q+     C T+AVN+W+DM  F  KY YFNFLQ L  Q  +
Sbjct:  194 KHFLLLPPTDVHR-MYIRDYPAARYCYSEESGEFRLELEEPER------RVPWCSVDPYPAT-------------GSEERSKFPLYFNGPKPFEVTVKAGEILYLPSMWFHHVKQSPGDGGC-TIAVNYWYDMQ-FDIKYAYFNFLQSLPYQSTD 326          
The following BLAST results are available for this feature:
BLAST of EWM23052.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103862|gb|EWM23052.1|0.000e+0100.00phospholipase - like protein [Nannochloropsis gadi... [more]
gi|301097730|ref|XP_002897959.1|1.123e-1535.03conserved hypothetical protein [Phytophthora infes... [more]
gi|1173944763|gb|OQR93462.1|2.123e-1530.26hypothetical protein THRCLA_08443, partial [Thraus... [more]
gi|1173953595|gb|OQS01127.1|2.365e-1537.58hypothetical protein ACHHYP_01804 [Achlya hypogyna... [more]
gi|1210520324|dbj|GAX20755.1|3.219e-1536.69hypothetical protein FisN_7Hh066 [Fistulifera sola... [more]
gi|1210529602|dbj|GAX11696.1|9.109e-1537.96hypothetical protein FisN_7Lh066 [Fistulifera sola... [more]
gi|219118680|ref|XP_002180108.1|3.413e-1433.58predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|695420304|ref|XP_009527887.1|4.832e-1431.40hypothetical protein PHYSODRAFT_500996 [Phytophtho... [more]
gi|1191654244|gb|OTG06216.1|4.863e-1432.00putative 2-oxoglutarate (2OG) and Fe(II)-dependent... [more]
gi|508785711|gb|EOY32967.1|6.286e-1436.132-oxoglutarate and Fe(II)-dependent oxygenase supe... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7643rna7643Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications