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Properties
| Property Name | Value |
|---|
| Product | phospholipase - like protein |
| Orig transcript id | gnl|cribi|Naga_100245g3.7081.mrna |
| Orig protein id | gnl|cribi|Naga_100245g3.7081 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:460383..462575 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7643 ID=rna7643|Name=rna7643|organism=Nannochloropsis gaditana|type=mRNA|length=843bp
ATGCACGGCCGAAGCAAGAAGCTCGGCAACATTTTAGAGGAGCTGGGCGT
CAAGAAAGGAGACAGGGTGGCAACACTGGCCATGAATACGTACAGACATA
TGGAACTTTACTTTGCCGTTTCGGGTGCTGGGGCCGTACTACACACCTTG
AATCCTCGTTTGTTTGCAGAGACTCTCACATGGATCGTCCGCCACGCCCA
AGACAGCGTCCTCTTCTTCGACCCCTGCTTCGCCTCCCTTGTGGAGCGAC
TCCTCCCGCACTGTCCAAGTGTTAAGCACTGGATCTGCCTCGTGGACGAA
GAGCGGATGCCAGTCCTACCTTCCCTTTCTCCGTCCTCTCCTTTCCTTTC
CCTTCACAACTACGAGGCTTTGCTTCGGGAGGGAAAAGAGGACTATGTGT
GGCCCATATTGGAGGAGACAGCAGCCTCTAGTCTCTGCTATACAAGCGGC
ACGACGGGCCCACCCAAGGGAGTGCTATACTCTCATCGCTCCACCGTGCT
TCACTCCTTGGCCGCCGCCCTCCCTGACTCCCTCAACGTCTCTGCCCGCG
ACACTGTTTTGCCCGCCGTTCCTCTTTTTCACGTGAACGCCTGGGGCATC
CCCTACACTGCAGCCATGGTAGGGTGCAAGCTGGTCTTGCCCGGTTCCGC
TTTGGATGGGGCTTCCCTGTACGAGCTGATGAAGGAAGAGGGGGTGCCAC
CGGAGGAGGGAGAAAGGGACGGAGGGGTGAGAGCAGGCCACCAAGAGAGT
TTCTACACGGACGACGATGGCGAGCGCTGGTTCCTGACGGGGGACGTGGC
TACCATCTGTCCGGATGGCTACATTAAGATCACGGATAGGTGA back to topprotein sequence of rna7643 >rna7643-protein ID=rna7643-protein|Name=rna7643|organism=Nannochloropsis gaditana|type=polypeptide|length=590bp
MLCRNFHALKHTNSSPYLTHFSSSSFAWTLLAMPGGPNMFPSEESGLNVD
QQDWIDEALQAFHQDVEDFWVPKAVCRLTQPISALTFLRDFVQPSIPVVF
CQGSGLMGEDWGLEAWKDWKEIVEKIGGERLVSVNVTPDGRGDAILGLRE
GQSGRGSGRGEVDDQDGSRNASGDAQASSDKSDSLSSPRNYPTSRPRRVF
VKPEERRMTFASFVKTLLQASGGEEQEKEVMYLSQQDDNLRREFPELLGK
EQLPDRGGGGQVSYLFSPCFLSPPLFLRFLLTFLLNERLIRLDFFQILFP
LFSFFVLLGTCQRLSPRPASFRLSSRCHQPLDWGCSLHFVPPQGPLRKYV
CRAKGRKGRKDSSAHRNLLWSILRSLTAKAAIVIKKCQPACGQSHILIRS
LPQPVLTPSPLQHFTLFPPSDVSSFLFARGLPQASYAFDSIRSCFQVNLD
GREKGCTNDGTVDWVDLEASKAAAARRGGREGGREEGREERRERVLHPLE
VRVKEGEVLYLPALWYHEVTQTCPTVAVNFWHDMCFFGPKYVYFNFLQRL
GAQRQERMKERGRDGRAERGQEIDRRDLNACRSYGSTSQT back to topmRNA from alignment at CM002472.1:460383..462575+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7643 ID=rna7643|Name=rna7643|organism=Nannochloropsis gaditana|type=mRNA|length=2193bp|location=Sequence derived from alignment at CM002472.1:460383..462575+ (Nannochloropsis gaditana)
GATACAAGGAGCAAGTAGAGTTGAATGAGCTATCACACGTAgcgtttccc
tcccaccctcagAGACGGGTGACTCGATTGCAGGGATACGATGCTGACAG
ACCGAGAAACGTATGCTTTGTCGAAACTTTCATGCCCTGAAACACACAAA
CTCATCTCCCTACCTCACTCACTTTTCTAGCTCGTCGTTTGCATGGACCC
TATTGGCAATGCCAGGAGGTCCAAATATGTTTCCGTCCGAGGAAAGTGGT
CTCAATGTTGACCAACAAGATTGGATTGACGAAGCGTTACAAGCTTTTCA
TCAAGATGTCGAGGATTTCTGGGTCCCAAAGGCAGTGTGTCGATTGACAC
AGCCAATAAGTGCCTTGACTTTCCTTAGGGTAAGCATTGTGCCAATGGAG
AAAATAAGGATGGGAAATAATAATGATGCGGAGAGAATGAATAGTGATAA
GCATCACAACAAAAAAAGTAACTGCACGAAAAAGGGCAAGTCGAAGACCC
TCGTTCATCGTATCACTCATCTTTCTAATCTTGTCAGGACTTTGTccagc
cctccatcccgGTCGTGTTTTGTCAAGGAAGCGGCCTAATGGGAGAAGAT
TGGGGGCTGGAGGCTTGGAAAGATTGGAAAGAAATTGTTGAAAAGATCGG
AGGAGAGCGATTGGTCTCCGTGAACGTGACGCctgatgggaggggggacg
caATCTTGGGTTTAAGGGAAGGGCAgtctgggagaggaagcgggagagga
gaagtAGACGATCAGGACGGATCGAGAAATGCATCGGGGGATGCACAAGC
GAGCTCCGACAAATCTGACTCCTTGTCATCGCCGAGAAATTATCCTACTT
CGCGCCCACGACGGGTCTTTGTGAAGCCAGAAGAAAGGCGGATGACGTTT
GCGTCCTTTGTCAAGACACTGCTGCAGGccagcgggggagaggaacaaGA
AAAGGAGGTCATGTATTTGAGTCAACAGGATGACAATCTGCGTCGGGAAT
TTCCGGAGTTGCTTGGGAAAGAGCAGCTGCcggacagaggaggagggggg
caggtaTCCtaccttttttctccttgctttctctccccccccctctttct
tcgatTTCTTCTCACATTTTTATTGAACGAACGTCTCATTCGTCTAGATT
TCTTTCAAATATTgttcccccttttttcctttttcgttCTTTTAGGTACC
TGCCAAcggctttcccctcgcccagcaAGCTTTCGGCTCTCCTCCCGATG
CCATCAACCTCTGGATTGGGGATGCTCGCTCCATTTCGTCCCTCCACAAG
GACCCTTACGAAAATATGTATGCCGTGctaaagggagaaaaggtaGGAAG
GATTCCTCTGCCCATCGCAACCTCCTCTGGAGCATTCTCCGTTCTTTGAC
TGCAAAGGCCGCTATCGTCATTAAAAAATGCCAGCCAGCGTGTGGTCAGT
CACACATTCTGATTCGTTCATTACCGCAACCCGttctcaccccctcccca
cttCAGCATTTTactctcttcccgccctcggacgtgtcctccttcctctt
cgctcgCGGTCTTCCGCAAGCCTCCTATGCCTTCGATTCGATCCGCTCCT
GTTTTCAAGTCAACCTCGATGGCAGAGAGAAGGGCTGTACGAACGATGGG
ACGGTTGATTGGGTCGATTTGGAAGCTTCgaaggcagcggcagcaaggcg
gggaggaagggagggagggagggaggaagggagggaggagaggcgggagc
gTGTCCTGCATCCGCTAGAAGTGCgagtgaaggaaggagaagtctTGTAT
CTACCCGCTTTGTGGTACCACGAAGTAACTCAGACGTGTCCCACCGTTGC
CGGTAAGAATGAGGTTGGGGAGGGCATGAATACCAGAACACTTATTGTCT
CAAAACATcgccattcctccctttctttcctccccccctccctccctcgt
tctctTCCCTATCTCCGGCTGGCTTTGCTCAGTAAACTTCTGGCACGACA
TGTGTTTCTTTGGCCCCAAGTATGTGTACTTCAACTTCTTGCAACGGCTA
GGTGCGCAGCGACAAGAGCGgatgaaagagagggggagggacgggcgagC
AGAAAGGGGCCAGGAAATCGACAGGCGCGATCTCAACGCTTGTAGAAGTT
ACGGAAGTACGAGTCAAACGTGAAAAGAAAACATTCTGGGAAG back to topCoding sequence (CDS) from alignment at CM002472.1:460383..462575+ >rna7643 ID=rna7643|Name=rna7643|organism=Nannochloropsis gaditana|type=CDS|length=5319bp|location=Sequence derived from alignment at CM002472.1:460383..462575+ (Nannochloropsis gaditana)
ATGCTTTGTCGAAACTTTCATGCCCTGAAACACACAAACTCATCTCCCTA
CCTCACTCACTTTTCTAGCTCGTCGTTTGCATGGACCCTATTGGCAATGC
CAGGAGGTCCAAATATGTTTCCGTCCGAGGAAAGTGGTCTCAATGTTGAC
CAACAAGATTGGATTGACGAAGCGTTACAAGCTTTTCATCAAGATGTCGA
GGATTTCTGGGTCCCAAAGGCAGTGTGTCGATTGACACAGCCAATAAGTG
CCTTGACTTTCCTTAGGGACTTTGTccagccctccatcccgGTCGTGTTT
TGTCAAGGAAGCGGCCTAATGGGAGAAGATTGGGGGCTGGAGGCTTGGAA
AGATTGGAAAGAAATTGTTGAAAAGATCGGAGGAGAGCGATTGGTCTCCG
TGAACGTGACGCctgatgggaggggggacgcaATCTTGGGTTTAAGGGAA
GGGCAgtctgggagaggaagcgggagaggagaagtAGACGATCAGGACGG
ATCGAGAAATGCATCGGGGGATGCACAAGCGAGCTCCGACAAATCTGACT
CCTTGTCATCGCCGAGAAATTATCCTACTTCGCGCCCACGACGGGTCTTT
GTGAAGCCAGAAGAAAGGCGGATGACGTTTGCGTCCTTTGTCAAGACACT
GCTGCAGGccagcgggggagaggaacaaGAAAAGGAGGTCATGTATTTGA
GTCAACAGGATGACAATCTGCGTCGGGAATTTCCGGAGTTGCTTGGGAAA
GAGCAGCTGCcggacagaggaggaggggggcaggtaTCCtaccttttttc
tccttgctttctctccccccccctctttcttcgatTTCTTCTCACATTTT
TATTGAACGAACGTCTCATTCGTCTAGATTTCTTTCAAATATTgttcccc
cttttttcctttttcgttCTTTTAGGTACCTGCCAAcggctttcccctcg
cccagcaAGCTTTCGGCTCTCCTCCCGATGCCATCAACCTCTGGATTGGG
GATGCTCGCTCCATTTCGTCCCTCCACAAGGACCCTTACGAAAATATGTA
TGCCGTGctaaagggagaaaaggtaGGAAGGATTCCTCTGCCCATCGCAA
CCTCCTCTGGAGCATTCTCCGTTCTTTGACTGCAAAGGCCGCTATCGTCA
TTAAAAAATGCCAGCCAGCGTGTGGTCAGTCACACATTCTGATTCGTTCA
TTACCGCAACCCGttctcaccccctccccacttCAGCATTTTactctctt
cccgccctcggacgtgtcctccttcctcttcgctcgCGGTCTTCCGCAAG
CCTCCTATGCCTTCGATTCGATCCGCTCCTGTTTTCAAGTCAACCTCGAT
GGCAGAGAGAAGGGCTGTACGAACGATGGGACGGTTGATTGGGTCGATTT
GGAAGCTTCgaaggcagcggcagcaaggcggggaggaagggagggaggga
gggaggaagggagggaggagaggcgggagcgTGTCCTGCATCCGCTAGAA
GTGCgagtgaaggaaggagaagtctTGTATCTACCCGCTTTGTGGTACCA
CGAAGTAACTCAGACGTGTCCCACCGTTGCCGTAAACTTCTGGCACGACA
TGTGTTTCTTTGGCCCCAAGTATGTGTACTTCAACTTCTTGCAACGGCTA
GGTGCGCAGCGACAAGAGCGgatgaaagagagggggagggacgggcgagC
AGAAAGGGGCCAGGAAATCGACAGGCGCGATCTCAACGCTTGTAGAAGTT
ACGGAAGTACGAGTCAAACGTGAATGCTTTGTCGAAACTTTCATGCCCTG
AAACACACAAACTCATCTCCCTACCTCACTCACTTTTCTAGCTCGTCGTT
TGCATGGACCCTATTGGCAATGCCAGGAGGTCCAAATATGTTTCCGTCCG
AGGAAAGTGGTCTCAATGTTGACCAACAAGATTGGATTGACGAAGCGTTA
CAAGCTTTTCATCAAGATGTCGAGGATTTCTGGGTCCCAAAGGCAGTGTG
TCGATTGACACAGCCAATAAGTGCCTTGACTTTCCTTAGGGACTTTGTcc
agccctccatcccgGTCGTGTTTTGTCAAGGAAGCGGCCTAATGGGAGAA
GATTGGGGGCTGGAGGCTTGGAAAGATTGGAAAGAAATTGTTGAAAAGAT
CGGAGGAGAGCGATTGGTCTCCGTGAACGTGACGCctgatgggagggggg
acgcaATCTTGGGTTTAAGGGAAGGGCAgtctgggagaggaagcgggaga
ggagaagtAGACGATCAGGACGGATCGAGAAATGCATCGGGGGATGCACA
AGCGAGCTCCGACAAATCTGACTCCTTGTCATCGCCGAGAAATTATCCTA
CTTCGCGCCCACGACGGGTCTTTGTGAAGCCAGAAGAAAGGCGGATGACG
TTTGCGTCCTTTGTCAAGACACTGCTGCAGGccagcgggggagaggaaca
aGAAAAGGAGGTCATGTATTTGAGTCAACAGGATGACAATCTGCGTCGGG
AATTTCCGGAGTTGCTTGGGAAAGAGCAGCTGCcggacagaggaggaggg
gggcaggtaTCCtaccttttttctccttgctttctctccccccccctctt
tcttcgatTTCTTCTCACATTTTTATTGAACGAACGTCTCATTCGTCTAG
ATTTCTTTCAAATATTgttcccccttttttcctttttcgttCTTTTAGGT
ACCTGCCAAcggctttcccctcgcccagcaAGCTTTCGGCTCTCCTCCCG
ATGCCATCAACCTCTGGATTGGGGATGCTCGCTCCATTTCGTCCCTCCAC
AAGGACCCTTACGAAAATATGTATGCCGTGctaaagggagaaaaggtaGG
AAGGATTCCTCTGCCCATCGCAACCTCCTCTGGAGCATTCTCCGTTCTTT
GACTGCAAAGGCCGCTATCGTCATTAAAAAATGCCAGCCAGCGTGTGGTC
AGTCACACATTCTGATTCGTTCATTACCGCAACCCGttctcaccccctcc
ccacttCAGCATTTTactctcttcccgccctcggacgtgtcctccttcct
cttcgctcgCGGTCTTCCGCAAGCCTCCTATGCCTTCGATTCGATCCGCT
CCTGTTTTCAAGTCAACCTCGATGGCAGAGAGAAGGGCTGTACGAACGAT
GGGACGGTTGATTGGGTCGATTTGGAAGCTTCgaaggcagcggcagcaag
gcggggaggaagggagggagggagggaggaagggagggaggagaggcggg
agcgTGTCCTGCATCCGCTAGAAGTGCgagtgaaggaaggagaagtctTG
TATCTACCCGCTTTGTGGTACCACGAAGTAACTCAGACGTGTCCCACCGT
TGCCGTAAACTTCTGGCACGACATGTGTTTCTTTGGCCCCAAGTATGTGT
ACTTCAACTTCTTGCAACGGCTAGGTGCGCAGCGACAAGAGCGgatgaaa
gagagggggagggacgggcgagCAGAAAGGGGCCAGGAAATCGACAGGCG
CGATCTCAACGCTTGTAGAAGTTACGGAAGTACGAGTCAAACGTGAATGC
TTTGTCGAAACTTTCATGCCCTGAAACACACAAACTCATCTCCCTACCTC
ACTCACTTTTCTAGCTCGTCGTTTGCATGGACCCTATTGGCAATGCCAGG
AGGTCCAAATATGTTTCCGTCCGAGGAAAGTGGTCTCAATGTTGACCAAC
AAGATTGGATTGACGAAGCGTTACAAGCTTTTCATCAAGATGTCGAGGAT
TTCTGGGTCCCAAAGGCAGTGTGTCGATTGACACAGCCAATAAGTGCCTT
GACTTTCCTTAGGGACTTTGTccagccctccatcccgGTCGTGTTTTGTC
AAGGAAGCGGCCTAATGGGAGAAGATTGGGGGCTGGAGGCTTGGAAAGAT
TGGAAAGAAATTGTTGAAAAGATCGGAGGAGAGCGATTGGTCTCCGTGAA
CGTGACGCctgatgggaggggggacgcaATCTTGGGTTTAAGGGAAGGGC
AgtctgggagaggaagcgggagaggagaagtAGACGATCAGGACGGATCG
AGAAATGCATCGGGGGATGCACAAGCGAGCTCCGACAAATCTGACTCCTT
GTCATCGCCGAGAAATTATCCTACTTCGCGCCCACGACGGGTCTTTGTGA
AGCCAGAAGAAAGGCGGATGACGTTTGCGTCCTTTGTCAAGACACTGCTG
CAGGccagcgggggagaggaacaaGAAAAGGAGGTCATGTATTTGAGTCA
ACAGGATGACAATCTGCGTCGGGAATTTCCGGAGTTGCTTGGGAAAGAGC
AGCTGCcggacagaggaggaggggggcaggtaTCCtaccttttttctcct
tgctttctctccccccccctctttcttcgatTTCTTCTCACATTTTTATT
GAACGAACGTCTCATTCGTCTAGATTTCTTTCAAATATTgttcccccttt
tttcctttttcgttCTTTTAGGTACCTGCCAAcggctttcccctcgccca
gcaAGCTTTCGGCTCTCCTCCCGATGCCATCAACCTCTGGATTGGGGATG
CTCGCTCCATTTCGTCCCTCCACAAGGACCCTTACGAAAATATGTATGCC
GTGctaaagggagaaaaggtaGGAAGGATTCCTCTGCCCATCGCAACCTC
CTCTGGAGCATTCTCCGTTCTTTGACTGCAAAGGCCGCTATCGTCATTAA
AAAATGCCAGCCAGCGTGTGGTCAGTCACACATTCTGATTCGTTCATTAC
CGCAACCCGttctcaccccctccccacttCAGCATTTTactctcttcccg
ccctcggacgtgtcctccttcctcttcgctcgCGGTCTTCCGCAAGCCTC
CTATGCCTTCGATTCGATCCGCTCCTGTTTTCAAGTCAACCTCGATGGCA
GAGAGAAGGGCTGTACGAACGATGGGACGGTTGATTGGGTCGATTTGGAA
GCTTCgaaggcagcggcagcaaggcggggaggaagggagggagggaggga
ggaagggagggaggagaggcgggagcgTGTCCTGCATCCGCTAGAAGTGC
gagtgaaggaaggagaagtctTGTATCTACCCGCTTTGTGGTACCACGAA
GTAACTCAGACGTGTCCCACCGTTGCCGTAAACTTCTGGCACGACATGTG
TTTCTTTGGCCCCAAGTATGTGTACTTCAACTTCTTGCAACGGCTAGGTG
CGCAGCGACAAGAGCGgatgaaagagagggggagggacgggcgagCAGAA
AGGGGCCAGGAAATCGACAGGCGCGATCTCAACGCTTGTAGAAGTTACGG
AAGTACGAGTCAAACGTGA back to top
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