EWM23080.1, cds7594 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|585103924|gb|EWM23080.1| (thioredoxin reductase [Nannochloropsis gaditana]) HSP 1 Score: 341.658 bits (875), Expect = 5.796e-119 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
Query: 1 MATVSLRGTEPRSNGGSHANPNYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIKDAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
MATVSLRGTEPRSNGGSHANPNYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIKDAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE
Sbjct: 1 MATVSLRGTEPRSNGGSHANPNYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIKDAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|298713267|emb|CBJ26963.1| (Electron donor (NADH / NADPH)-dependent reductase [Ectocarpus siliculosus]) HSP 1 Score: 188.734 bits (478), Expect = 2.085e-54 Identity = 88/142 (61.97%), Postives = 107/142 (75.35%), Query Frame = 0
Query: 20 NPNYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIKDAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKE 161
+ +Y YDL VIGGGSGG+A AK+AA +G KV LFD+VKPS QG+KWGLGGTCVNVGCVPKK+ HY+GLLG + DA+A GW G+P+ HDWE + V++H MLNF YR GL+SA V Y+N L TGPH VT +GKE
Sbjct: 8 SASYDYDLAVIGGGSGGMAVAKKAASYGKKVVLFDFVKPSPQGTKWGLGGTCVNVGCVPKKLMHYAGLLGAGMHDAKAFGWKVGNPE--HDWEAMVETVQNHVKMLNFRYRVGLKSAQVTYVNGLARLTGPHEVTCEKRGKE 147
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|873218434|emb|CEM39538.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 178.333 bits (451), Expect = 1.455e-50 Identity = 92/142 (64.79%), Postives = 103/142 (72.54%), Query Frame = 0
Query: 22 NYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAI-KDAQALGWTFG-DPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKE 161
Y YDLIVIGGGSGG+A AKE+A GAKVALFD+VKPSTQG+KWGLGGTCVNVGCVPKK+ HY LLG + DA GW G D K HDW L V++H LNF YR GL+ A+V YINAL FT PH +TY KGKE
Sbjct: 10 RYDYDLIVIGGGSGGMACAKESAMQGAKVALFDFVKPSTQGTKWGLGGTCVNVGCVPKKLMHYGALLGGKLHHDAAKYGWQVGKDVK--HDWATLVQTVQNHVKSLNFSYRSGLRVANVTYINALAKFTSPHHITYTLKGKE 149
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|1084847073|ref|XP_018641987.1| (thioredoxin reductase [Plasmodium gaboni] >gi|1011105396|gb|KYO00220.1| thioredoxin reductase [Plasmodium gaboni]) HSP 1 Score: 174.866 bits (442), Expect = 1.497e-48 Identity = 83/144 (57.64%), Postives = 104/144 (72.22%), Query Frame = 0
Query: 23 YTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIK-DAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
Y YD +VIGGG GG+A+AKEAA HGA+V LFDYVKPS+QG+KWG+GGTCVNVGCVPKK+ HY+G +G K D++A GW F + K HDW+ L + V+ H LNF Y GL+S+ V+YINAL ++VTY KG EE
Sbjct: 116 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGNMGSIFKLDSKAYGWKFDNLK--HDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINALAKLKDKNTVTYYLKGDLSKEE 257
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|641581632|emb|CDO64297.1| (thioredoxin reductase [Plasmodium reichenowi]) HSP 1 Score: 174.481 bits (441), Expect = 2.195e-48 Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 0
Query: 23 YTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIK-DAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
Y YD +VIGGG GG+A+AKEAA HGA+V LFDYVKPS+QG+KWG+GGTCVNVGCVPKK+ HY+G +G K D++A GW F + K HDW+ L + V+ H LNF Y GL+S+ V+YIN L G ++V+Y KG EE
Sbjct: 116 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFDNLK--HDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKGKNTVSYYLKGDLSKEE 257
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|56525190|emb|CAH79243.1| (Thioredoxin reductase, putative [Plasmodium chabaudi chabaudi]) HSP 1 Score: 171.4 bits (433), Expect = 8.340e-48 Identity = 85/153 (55.56%), Postives = 104/153 (67.97%), Query Frame = 0
Query: 14 NGGSHANPNYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIK-DAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
N S + NY YD IVIGGG GG+A+AKEAA HGAKV LFD+VKPSTQG+KWG+GGTCVNVGCVPKK+ HY+G +G K D++ GW + K HDW L S V+ H LNF Y GL+S+ V+YIN L ++V+Y KG EE
Sbjct: 22 NKQSMDSSNYDYDYIVIGGGPGGMASAKEAASHGAKVLLFDFVKPSTQGTKWGIGGTCVNVGCVPKKLMHYAGNMGTLFKNDSEKYGWDCDNLK--HDWNKLVSTVQSHIRSLNFSYMVGLKSSKVKYINGLAKLKDKNTVSYYLKGDTSKEE 172
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|68006556|ref|XP_670412.1| (hypothetical protein [Plasmodium berghei strain ANKA], partial [Plasmodium berghei ANKA] >gi|56485643|emb|CAI03798.1| hypothetical protein PB301363.00.0, partial [Plasmodium berghei]) HSP 1 Score: 162.925 bits (411), Expect = 1.067e-47 Identity = 81/145 (55.86%), Postives = 100/145 (68.97%), Query Frame = 0
Query: 22 NYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIK-DAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
NY YD IVIGGG GG+A+AKEAA HGAKV LFD+VKPS+QG+KWG+GGTCVNVGCVPKK+ HY+G +G K D+ GW + K HDW L S V+ H LNF Y GL+S+ V+YIN L ++V+Y KG E+
Sbjct: 41 NYDYDYIVIGGGPGGMASAKEAASHGAKVLLFDFVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGNMGTLFKNDSDKYGWECNNLK--HDWNKLVSTVQSHIRSLNFSYMIGLKSSKVKYINGLAKLKNKNTVSYYLKGDSSKED 183
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|1068920092|emb|SCN59762.1| (thioredoxin reductase, putative [Plasmodium chabaudi chabaudi]) HSP 1 Score: 172.555 bits (436), Expect = 1.185e-47 Identity = 85/153 (55.56%), Postives = 104/153 (67.97%), Query Frame = 0
Query: 14 NGGSHANPNYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIK-DAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
N S + NY YD IVIGGG GG+A+AKEAA HGAKV LFD+VKPSTQG+KWG+GGTCVNVGCVPKK+ HY+G +G K D++ GW + K HDW L S V+ H LNF Y GL+S+ V+YIN L ++V+Y KG EE
Sbjct: 118 NKQSMDSSNYDYDYIVIGGGPGGMASAKEAASHGAKVLLFDFVKPSTQGTKWGIGGTCVNVGCVPKKLMHYAGNMGTLFKNDSEKYGWDCDNLK--HDWNKLVSTVQSHIRSLNFSYMVGLKSSKVKYINGLAKLKDKNTVSYYLKGDTSKEE 268
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|1061787058|emb|SCM21377.1| (thioredoxin reductase, putative [Plasmodium chabaudi chabaudi]) HSP 1 Score: 172.555 bits (436), Expect = 1.185e-47 Identity = 85/153 (55.56%), Postives = 104/153 (67.97%), Query Frame = 0
Query: 14 NGGSHANPNYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIK-DAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
N S + NY YD IVIGGG GG+A+AKEAA HGAKV LFD+VKPSTQG+KWG+GGTCVNVGCVPKK+ HY+G +G K D++ GW + K HDW L S V+ H LNF Y GL+S+ V+YIN L ++V+Y KG EE
Sbjct: 118 NKQSMDSSNYDYDYIVIGGGPGGMASAKEAASHGAKVLLFDFVKPSTQGTKWGIGGTCVNVGCVPKKLMHYAGNMGTLFKNDSEKYGWDCDNLK--HDWNKLVSTVQSHIRSLNFSYMVGLKSSKVKYINGLAKLKDKNTVSYYLKGDTSKEE 268
BLAST of EWM23080.1 vs. NCBI_GenBank
Match: gi|1027954390|ref|XP_745009.2| (thioredoxin reductase, putative [Plasmodium chabaudi chabaudi] >gi|675220355|emb|CDR12748.1| thioredoxin reductase, putative [Plasmodium chabaudi chabaudi]) HSP 1 Score: 172.555 bits (436), Expect = 1.185e-47 Identity = 85/153 (55.56%), Postives = 104/153 (67.97%), Query Frame = 0
Query: 14 NGGSHANPNYTYDLIVIGGGSGGLAAAKEAAKHGAKVALFDYVKPSTQGSKWGLGGTCVNVGCVPKKICHYSGLLGHAIK-DAQALGWTFGDPKPAHDWEGLSSPVRDHRGMLNFLYRRGLQSAHVEYINALTAFTGPHSVTYLPKGKEEGEE 165
N S + NY YD IVIGGG GG+A+AKEAA HGAKV LFD+VKPSTQG+KWG+GGTCVNVGCVPKK+ HY+G +G K D++ GW + K HDW L S V+ H LNF Y GL+S+ V+YIN L ++V+Y KG EE
Sbjct: 118 NKQSMDSSNYDYDYIVIGGGPGGMASAKEAASHGAKVLLFDFVKPSTQGTKWGIGGTCVNVGCVPKKLMHYAGNMGTLFKNDSEKYGWDCDNLK--HDWNKLVSTVQSHIRSLNFSYMVGLKSSKVKYINGLAKLKDKNTVSYYLKGDTSKEE 268 The following BLAST results are available for this feature:
BLAST of EWM23080.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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